Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 ANS1YHR126C 480 nt1.2□□□□□ -2.22
YKU80Q04437 YEL020C-BYEL020C-B 198 nt1.19□□□□□ -2.22
YKU80Q04437 OLI1Q0130 231 nt1.19□□□□□ -2.22
YKU80Q04437 YJL197C-AYJL197C-A 282 nt1.19□□□□□ -2.22
YKU80Q04437 YBR064WYBR064W 429 nt1.19□□□□□ -2.22
YKU80Q04437 VAM6YDL077C 3150 nt1.19□□□□□ -2.22
YKU80Q04437 SPO21YOL091W 1830 nt1.19□□□□□ -2.22
YKU80Q04437 CDC39YCR093W 6327 nt1.19□□□□□ -2.22
YKU80Q04437 YGL052WYGL052W 306 nt1.18□□□□□ -2.22
YKU80Q04437 YJL120WYJL120W 324 nt1.18□□□□□ -2.22
YKU80Q04437 YNL284C-BYNL284C-B 5268 nt1.17□□□□□ -2.22
YKU80Q04437 snR55snR55 98 nt1.17□□□□□ -2.22
YKU80Q04437 APL1YJR005W 2103 nt1.17□□□□□ -2.22
YKU80Q04437 YOL155W-AYOL155W-A 135 nt1.16□□□□□ -2.22
YKU80Q04437 YOR015WYOR015W 360 nt1.16□□□□□ -2.22
YKU80Q04437 SPO75YLL005C 2607 nt1.15□□□□□ -2.23
YKU80Q04437 snR80snR80 171 nt1.15□□□□□ -2.23
YKU80Q04437 YLR120W-AYLR120W-A 102 nt1.15□□□□□ -2.23
YKU80Q04437 IES4YOR189W 351 nt1.15□□□□□ -2.23
YKU80Q04437 SGF11YPL047W 300 nt1.15□□□□□ -2.23
YKU80Q04437 MCM10YIL150C 1716 nt1.15□□□□□ -2.23
YKU80Q04437 ABF2YMR072W 552 nt1.14□□□□□ -2.23
YKU80Q04437 YPR092WYPR092W 306 nt1.14□□□□□ -2.23
YKU80Q04437 PAA1YDR071C 576 nt1.13□□□□□ -2.23
YKU80Q04437 YMR172C-AYMR172C-A 384 nt1.13□□□□□ -2.23
YKU80Q04437 YMR307C-AYMR307C-A 195 nt1.13□□□□□ -2.23
YKU80Q04437 YPL044CYPL044C 549 nt1.12□□□□□ -2.23
YKU80Q04437 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
YKU80Q04437 BEM2YER155C 6504 nt1.1□□□□□ -2.23
YKU80Q04437 ISD11YER048W-A 285 nt1.1□□□□□ -2.23
YKU80Q04437 CMC4YMR194C-B 222 nt1.1□□□□□ -2.23
YKU80Q04437 KAP120YPL125W 3099 nt1.09□□□□□ -2.23
YKU80Q04437 SCC2YDR180W 4482 nt1.09□□□□□ -2.24
YKU80Q04437 snR74snR74 88 nt1.08□□□□□ -2.24
YKU80Q04437 YOR072W-BYOR072W-B 162 nt1.08□□□□□ -2.24
YKU80Q04437 IML1YJR138W 4755 nt1.07□□□□□ -2.24
YKU80Q04437 NOP9YJL010C 2001 nt1.07□□□□□ -2.24
YKU80Q04437 YGR130CYGR130C 2451 nt1.06□□□□□ -2.24
YKU80Q04437 SPG3YDR504C 384 nt1.06□□□□□ -2.24
YKU80Q04437 tV(UAC)BtV(UAC)B 74 nt1.06□□□□□ -2.24
YKU80Q04437 tV(UAC)DtV(UAC)D 74 nt1.06□□□□□ -2.24
YKU80Q04437 YLL019W-AYLL019W-A 93 nt1.06□□□□□ -2.24
YKU80Q04437 YNL211CYNL211C 261 nt1.06□□□□□ -2.24
YKU80Q04437 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
YKU80Q04437 NPR2YEL062W 1848 nt1.05□□□□□ -2.24
YKU80Q04437 SIP4YJL089W 2490 nt1.05□□□□□ -2.24
YKU80Q04437 RPL26BYGR034W 384 nt1.05□□□□□ -2.24
YKU80Q04437 YDL196WYDL196W 330 nt1.04□□□□□ -2.24
YKU80Q04437 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
YKU80Q04437 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
YKU80Q04437 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
YKU80Q04437 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
YKU80Q04437 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
YKU80Q04437 YBR182C-AYBR182C-A 195 nt1.04□□□□□ -2.24
YKU80Q04437 tF(GAA)QtF(GAA)Q 75 nt1.03□□□□□ -2.24
YKU80Q04437 JLP2YMR132C 627 nt1.03□□□□□ -2.24
YKU80Q04437 TTI1YKL033W 3117 nt1.03□□□□□ -2.24
YKU80Q04437 YCR018C-AYCR018C-A 255 nt1.02□□□□□ -2.25
YKU80Q04437 YKU70YMR284W 1809 nt1.02□□□□□ -2.25
YKU80Q04437 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
YKU80Q04437 YDR354C-AYDR354C-A 144 nt1.01□□□□□ -2.25
YKU80Q04437 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
YKU80Q04437 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
YKU80Q04437 ULI1YFR026C 510 nt1□□□□□ -2.25
YKU80Q04437 YOR302WYOR302W 78 nt1□□□□□ -2.25
YKU80Q04437 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
YKU80Q04437 YIR030W-AYIR030W-A 384 nt0.99□□□□□ -2.25
YKU80Q04437 BLI1YKL061W 342 nt0.99□□□□□ -2.25
YKU80Q04437 YBR131C-AYBR131C-A 90 nt0.99□□□□□ -2.25
YKU80Q04437 YDR406W-AYDR406W-A 246 nt0.98□□□□□ -2.25
YKU80Q04437 YOR345CYOR345C 351 nt0.98□□□□□ -2.25
YKU80Q04437 YEL014CYEL014C 306 nt0.97□□□□□ -2.25
YKU80Q04437 tM(CAU)Q1tM(CAU)Q1 76 nt0.97□□□□□ -2.25
YKU80Q04437 YAL067W-AYAL067W-A 228 nt0.97□□□□□ -2.25
YKU80Q04437 BFR2YDR299W 1605 nt0.97□□□□□ -2.25
YKU80Q04437 YMR046W-AYMR046W-A 129 nt0.96□□□□□ -2.26
YKU80Q04437 PRP16YKR086W 3216 nt0.93□□□□□ -2.26
YKU80Q04437 PMP1YCR024C-A 123 nt0.93□□□□□ -2.26
YKU80Q04437 YDL185C-AYDL185C-A 228 nt0.92□□□□□ -2.26
YKU80Q04437 YFR012W-AYFR012W-A 87 nt0.92□□□□□ -2.26
YKU80Q04437 APQ12YIL040W 417 nt0.92□□□□□ -2.26
YKU80Q04437 RPS30BYOR182C 192 nt0.92□□□□□ -2.26
YKU80Q04437 SEC8YPR055W 3198 nt0.92□□□□□ -2.26
YKU80Q04437 YDL073WYDL073W 2955 nt0.91□□□□□ -2.26
YKU80Q04437 YJL026C-AYJL026C-A 222 nt0.91□□□□□ -2.26
YKU80Q04437 snR190snR190 190 nt0.91□□□□□ -2.26
YKU80Q04437 YCR038W-AYCR038W-A 126 nt0.9□□□□□ -2.27
YKU80Q04437 PAM16YJL104W 450 nt0.9□□□□□ -2.27
YKU80Q04437 COY1YKL179C 2040 nt0.89□□□□□ -2.27
YKU80Q04437 LTE1YAL024C 4308 nt0.89□□□□□ -2.27
YKU80Q04437 YKL100W-AYKL100W-A 90 nt0.89□□□□□ -2.27
YKU80Q04437 snR52snR52 92 nt0.89□□□□□ -2.27
YKU80Q04437 ASE1YOR058C 2658 nt0.88□□□□□ -2.27
YKU80Q04437 RKR1YMR247C 4689 nt0.87□□□□□ -2.27
YKU80Q04437 YGL123C-AYGL123C-A 231 nt0.86□□□□□ -2.27
YKU80Q04437 COX5BYIL111W 456 nt0.86□□□□□ -2.27
YKU80Q04437 YLR282CYLR282C 342 nt0.86□□□□□ -2.27
YKU80Q04437 PAU24YBR301W 363 nt0.86□□□□□ -2.27
YKU80Q04437 YLR399W-AYLR399W-A 105 nt0.85□□□□□ -2.27
YKU80Q04437 YNL337WYNL337W 255 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms