Protein–RNA interactions for Protein: Q04007

SND1, SRP-independent targeting protein 1, yeastyeast

Predictions only

Length 877 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SND1Q04007 YDL007C-AYDL007C-A 258 nt1.64□□□□□ -2.15
SND1Q04007 YLR342W-AYLR342W-A 174 nt1.63□□□□□ -2.15
SND1Q04007 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
SND1Q04007 CHS1YNL192W 3396 nt1.62□□□□□ -2.15
SND1Q04007 CCH1YGR217W 6120 nt1.62□□□□□ -2.15
SND1Q04007 MCM10YIL150C 1716 nt1.61□□□□□ -2.15
SND1Q04007 YDR521WYDR521W 336 nt1.61□□□□□ -2.15
SND1Q04007 RPS25BYLR333C 327 nt1.61□□□□□ -2.15
SND1Q04007 MSH3YCR092C 3057 nt1.6□□□□□ -2.15
SND1Q04007 YDL206WYDL206W 2289 nt1.6□□□□□ -2.15
SND1Q04007 ATP8Q0080 147 nt1.6□□□□□ -2.15
SND1Q04007 YJL120WYJL120W 324 nt1.6□□□□□ -2.15
SND1Q04007 snR52snR52 92 nt1.6□□□□□ -2.15
SND1Q04007 YBR174CYBR174C 315 nt1.59□□□□□ -2.15
SND1Q04007 PMD1YER132C 5262 nt1.59□□□□□ -2.16
SND1Q04007 YLR419WYLR419W 4308 nt1.58□□□□□ -2.16
SND1Q04007 ULI1YFR026C 510 nt1.58□□□□□ -2.16
SND1Q04007 ECM12YHR021W-A 456 nt1.58□□□□□ -2.16
SND1Q04007 snR14snR14 160 nt1.58□□□□□ -2.16
SND1Q04007 YOR345CYOR345C 351 nt1.58□□□□□ -2.16
SND1Q04007 FIG4YNL325C 2640 nt1.57□□□□□ -2.16
SND1Q04007 IRA1YBR140C 9279 nt1.57□□□□□ -2.16
SND1Q04007 APL3YBL037W 3078 nt1.56□□□□□ -2.16
SND1Q04007 YOR072W-BYOR072W-B 162 nt1.56□□□□□ -2.16
SND1Q04007 snR46snR46 197 nt1.56□□□□□ -2.16
SND1Q04007 SET3YKR029C 2256 nt1.55□□□□□ -2.16
SND1Q04007 YLL019W-AYLL019W-A 93 nt1.55□□□□□ -2.16
SND1Q04007 CDC31YOR257W 486 nt1.55□□□□□ -2.16
SND1Q04007 AHC1YOR023C 1701 nt1.54□□□□□ -2.16
SND1Q04007 YLL020CYLL020C 306 nt1.54□□□□□ -2.16
SND1Q04007 YOR170WYOR170W 306 nt1.54□□□□□ -2.16
SND1Q04007 PIK1YNL267W 3201 nt1.53□□□□□ -2.16
SND1Q04007 YAR009CYAR009C 3591 nt1.53□□□□□ -2.16
SND1Q04007 tQ(UUG)E2tQ(UUG)E2 72 nt1.53□□□□□ -2.16
SND1Q04007 YBR200W-AYBR200W-A 165 nt1.52□□□□□ -2.17
SND1Q04007 YBR221W-AYBR221W-A 105 nt1.52□□□□□ -2.17
SND1Q04007 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
SND1Q04007 STO1YMR125W 2586 nt1.52□□□□□ -2.17
SND1Q04007 PMP1YCR024C-A 123 nt1.51□□□□□ -2.17
SND1Q04007 YDL196WYDL196W 330 nt1.51□□□□□ -2.17
SND1Q04007 YNL170WYNL170W 396 nt1.51□□□□□ -2.17
SND1Q04007 RPL33BYOR234C 324 nt1.51□□□□□ -2.17
SND1Q04007 HKR1YDR420W 5409 nt1.5□□□□□ -2.17
SND1Q04007 YBR206WYBR206W 324 nt1.5□□□□□ -2.17
SND1Q04007 MDS3YGL197W 4464 nt1.5□□□□□ -2.17
SND1Q04007 SSK2YNR031C 4740 nt1.5□□□□□ -2.17
SND1Q04007 RSM22YKL155C 1887 nt1.5□□□□□ -2.17
SND1Q04007 SLD3YGL113W 2007 nt1.49□□□□□ -2.17
SND1Q04007 NUP188YML103C 4968 nt1.49□□□□□ -2.17
SND1Q04007 TRM732YMR259C 4263 nt1.49□□□□□ -2.17
SND1Q04007 NUP157YER105C 4176 nt1.47□□□□□ -2.17
SND1Q04007 STF2YGR008C 255 nt1.47□□□□□ -2.17
SND1Q04007 YOR381W-AYOR381W-A 168 nt1.47□□□□□ -2.17
SND1Q04007 COY1YKL179C 2040 nt1.47□□□□□ -2.17
SND1Q04007 WAR1YML076C 2835 nt1.46□□□□□ -2.18
SND1Q04007 PET127YOR017W 2403 nt1.46□□□□□ -2.18
SND1Q04007 EAF1YDR359C 2949 nt1.46□□□□□ -2.18
SND1Q04007 NST1YNL091W 3723 nt1.45□□□□□ -2.18
SND1Q04007 YDR354C-AYDR354C-A 144 nt1.45□□□□□ -2.18
SND1Q04007 YBL053WYBL053W 375 nt1.45□□□□□ -2.18
SND1Q04007 SMC1YFL008W 3678 nt1.44□□□□□ -2.18
SND1Q04007 LAA1YJL207C 6045 nt1.44□□□□□ -2.18
SND1Q04007 SDH6YDR379C-A 240 nt1.44□□□□□ -2.18
SND1Q04007 YEL073CYEL073C 324 nt1.44□□□□□ -2.18
SND1Q04007 UBP3YER151C 2739 nt1.43□□□□□ -2.18
SND1Q04007 STB6YKL072W 2301 nt1.43□□□□□ -2.18
SND1Q04007 HUG1YML058W-A 207 nt1.43□□□□□ -2.18
SND1Q04007 YIL134C-AYIL134C-A 204 nt1.42□□□□□ -2.18
SND1Q04007 YGR164WYGR164W 336 nt1.41□□□□□ -2.18
SND1Q04007 RPS30BYOR182C 192 nt1.4□□□□□ -2.19
SND1Q04007 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
SND1Q04007 HAL9YOL089C 3093 nt1.38□□□□□ -2.19
SND1Q04007 YCR038W-AYCR038W-A 126 nt1.38□□□□□ -2.19
SND1Q04007 PAA1YDR071C 576 nt1.38□□□□□ -2.19
SND1Q04007 YJL026C-AYJL026C-A 222 nt1.37□□□□□ -2.19
SND1Q04007 YPL044CYPL044C 549 nt1.37□□□□□ -2.19
SND1Q04007 PRP42YDR235W 1635 nt1.37□□□□□ -2.19
SND1Q04007 YGR130CYGR130C 2451 nt1.37□□□□□ -2.19
SND1Q04007 IML1YJR138W 4755 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
SND1Q04007 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
SND1Q04007 CDC39YCR093W 6327 nt1.35□□□□□ -2.19
SND1Q04007 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
SND1Q04007 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
SND1Q04007 YIL020C-AYIL020C-A 339 nt1.35□□□□□ -2.19
SND1Q04007 COX12YLR038C 252 nt1.35□□□□□ -2.19
SND1Q04007 KAP120YPL125W 3099 nt1.34□□□□□ -2.2
SND1Q04007 Q0143Q0143 153 nt1.33□□□□□ -2.2
SND1Q04007 NOP9YJL010C 2001 nt1.32□□□□□ -2.2
SND1Q04007 APL1YJR005W 2103 nt1.32□□□□□ -2.2
SND1Q04007 CMC4YMR194C-B 222 nt1.31□□□□□ -2.2
SND1Q04007 TTI1YKL033W 3117 nt1.31□□□□□ -2.2
SND1Q04007 YNL211CYNL211C 261 nt1.3□□□□□ -2.2
SND1Q04007 snR48snR48 113 nt1.3□□□□□ -2.2
SND1Q04007 YHL015W-AYHL015W-A 84 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 63.4 ms