Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 GCN2YDR283C 4980 nt2.25□□□□□ -2.05
UFD2P54860 YJR039WYJR039W 3366 nt2.24□□□□□ -2.05
UFD2P54860 YIL071W-AYIL071W-A 477 nt2.24□□□□□ -2.05
UFD2P54860 YOR019WYOR019W 2193 nt2.24□□□□□ -2.05
UFD2P54860 YLR419WYLR419W 4308 nt2.24□□□□□ -2.05
UFD2P54860 YLL054CYLL054C 2532 nt2.23□□□□□ -2.05
UFD2P54860 MYO4YAL029C 4416 nt2.23□□□□□ -2.05
UFD2P54860 ALY2YJL084C 3141 nt2.22□□□□□ -2.05
UFD2P54860 TOR2YKL203C 7425 nt2.22□□□□□ -2.05
UFD2P54860 EMC5YIL027C 426 nt2.22□□□□□ -2.05
UFD2P54860 UFD2YDL190C 2886 nt2.21□□□□□ -2.06
UFD2P54860 ATG9YDL149W 2994 nt2.21□□□□□ -2.06
UFD2P54860 RAD50YNL250W 3939 nt2.21□□□□□ -2.06
UFD2P54860 PDR8YLR266C 2106 nt2.2□□□□□ -2.06
UFD2P54860 LHS1YKL073W 2646 nt2.2□□□□□ -2.06
UFD2P54860 SEC31YDL195W 3822 nt2.2□□□□□ -2.06
UFD2P54860 BPH1YCR032W 6504 nt2.2□□□□□ -2.06
UFD2P54860 RGA1YOR127W 3024 nt2.2□□□□□ -2.06
UFD2P54860 COA6YMR244C-A 315 nt2.19□□□□□ -2.06
UFD2P54860 PAN2YGL094C 3348 nt2.19□□□□□ -2.06
UFD2P54860 YDR544CYDR544C 429 nt2.18□□□□□ -2.06
UFD2P54860 YGL123C-AYGL123C-A 231 nt2.18□□□□□ -2.06
UFD2P54860 TFB5YDR079C-A 219 nt2.17□□□□□ -2.06
UFD2P54860 YBR099CYBR099C 384 nt2.17□□□□□ -2.06
UFD2P54860 FKS1YLR342W 5631 nt2.16□□□□□ -2.06
UFD2P54860 YMR045CYMR045C 5268 nt2.16□□□□□ -2.06
UFD2P54860 YGL182CYGL182C 324 nt2.16□□□□□ -2.06
UFD2P54860 CMC4YMR194C-B 222 nt2.16□□□□□ -2.06
UFD2P54860 MMS4YBR098W 2076 nt2.15□□□□□ -2.07
UFD2P54860 YCR095W-AYCR095W-A 159 nt2.15□□□□□ -2.07
UFD2P54860 OST4YDL232W 111 nt2.15□□□□□ -2.07
UFD2P54860 YMR272W-BYMR272W-B 108 nt2.15□□□□□ -2.07
UFD2P54860 BFR2YDR299W 1605 nt2.15□□□□□ -2.07
UFD2P54860 CHS6YJL099W 2241 nt2.15□□□□□ -2.07
UFD2P54860 NEO1YIL048W 3456 nt2.15□□□□□ -2.07
UFD2P54860 TBS1YBR150C 3285 nt2.15□□□□□ -2.07
UFD2P54860 RSM22YKL155C 1887 nt2.14□□□□□ -2.07
UFD2P54860 YMR326CYMR326C 309 nt2.14□□□□□ -2.07
UFD2P54860 UBP2YOR124C 3819 nt2.14□□□□□ -2.07
UFD2P54860 KIP1YBL063W 3336 nt2.14□□□□□ -2.07
UFD2P54860 SLX4YLR135W 2247 nt2.14□□□□□ -2.07
UFD2P54860 PMP2YEL017C-A 132 nt2.13□□□□□ -2.07
UFD2P54860 YLL020CYLL020C 306 nt2.13□□□□□ -2.07
UFD2P54860 PEP1YBL017C 4740 nt2.13□□□□□ -2.07
UFD2P54860 MGA2YIR033W 3342 nt2.12□□□□□ -2.07
UFD2P54860 KCS1YDR017C 3153 nt2.12□□□□□ -2.07
UFD2P54860 UTP8YGR128C 2142 nt2.12□□□□□ -2.07
UFD2P54860 SKI3YPR189W 4299 nt2.12□□□□□ -2.07
UFD2P54860 YNL103W-AYNL103W-A 90 nt2.12□□□□□ -2.07
UFD2P54860 YOR161W-AYOR161W-A 81 nt2.12□□□□□ -2.07
UFD2P54860 snR14snR14 160 nt2.12□□□□□ -2.07
UFD2P54860 YAR009CYAR009C 3591 nt2.12□□□□□ -2.07
UFD2P54860 YLR282CYLR282C 342 nt2.11□□□□□ -2.07
UFD2P54860 FAB1YFR019W 6837 nt2.11□□□□□ -2.07
UFD2P54860 YKL100W-AYKL100W-A 90 nt2.1□□□□□ -2.07
UFD2P54860 SMC4YLR086W 4257 nt2.1□□□□□ -2.07
UFD2P54860 STB6YKL072W 2301 nt2.09□□□□□ -2.07
UFD2P54860 COX5BYIL111W 456 nt2.09□□□□□ -2.07
UFD2P54860 YBL039C-AYBL039C-A 84 nt2.09□□□□□ -2.07
UFD2P54860 EAF1YDR359C 2949 nt2.08□□□□□ -2.08
UFD2P54860 YCS4YLR272C 3531 nt2.07□□□□□ -2.08
UFD2P54860 SOM1YEL059C-A 225 nt2.05□□□□□ -2.08
UFD2P54860 YNL067W-BYNL067W-B 141 nt2.05□□□□□ -2.08
UFD2P54860 KAP122YGL016W 3246 nt2.05□□□□□ -2.08
UFD2P54860 MON2YNL297C 4911 nt2.04□□□□□ -2.08
UFD2P54860 SMC1YFL008W 3678 nt2.03□□□□□ -2.08
UFD2P54860 NUP157YER105C 4176 nt2.03□□□□□ -2.08
UFD2P54860 snR61snR61 90 nt2.02□□□□□ -2.09
UFD2P54860 TAH1YCR060W 336 nt2.02□□□□□ -2.09
UFD2P54860 QCR9YGR183C 201 nt2.02□□□□□ -2.09
UFD2P54860 YHR217CYHR217C 462 nt2.02□□□□□ -2.09
UFD2P54860 YLR422WYLR422W 5799 nt2.01□□□□□ -2.09
UFD2P54860 YHR214C-BYHR214C-B 5382 nt2□□□□□ -2.09
UFD2P54860 YML002WYML002W 2214 nt2□□□□□ -2.09
UFD2P54860 STO1YMR125W 2586 nt2□□□□□ -2.09
UFD2P54860 SET3YKR029C 2256 nt2□□□□□ -2.09
UFD2P54860 TMA7YLR262C-A 195 nt1.99□□□□□ -2.09
UFD2P54860 snR39BsnR39B 96 nt1.99□□□□□ -2.09
UFD2P54860 NOP9YJL010C 2001 nt1.99□□□□□ -2.09
UFD2P54860 MYO2YOR326W 4725 nt1.98□□□□□ -2.09
UFD2P54860 RTP1YMR185W 2946 nt1.97□□□□□ -2.09
UFD2P54860 CFT1YDR301W 4074 nt1.97□□□□□ -2.09
UFD2P54860 STF2YGR008C 255 nt1.96□□□□□ -2.1
UFD2P54860 YHR131W-AYHR131W-A 246 nt1.96□□□□□ -2.1
UFD2P54860 YLR041WYLR041W 321 nt1.96□□□□□ -2.1
UFD2P54860 SEC21YNL287W 2808 nt1.94□□□□□ -2.1
UFD2P54860 ANS1YHR126C 480 nt1.94□□□□□ -2.1
UFD2P54860 WAR1YML076C 2835 nt1.93□□□□□ -2.1
UFD2P54860 TRM732YMR259C 4263 nt1.93□□□□□ -2.1
UFD2P54860 FYV10YIL097W 1551 nt1.93□□□□□ -2.1
UFD2P54860 IRC20YLR247C 4671 nt1.92□□□□□ -2.1
UFD2P54860 SBH1YER087C-B 249 nt1.91□□□□□ -2.1
UFD2P54860 snR190snR190 190 nt1.91□□□□□ -2.1
UFD2P54860 YOR093CYOR093C 4947 nt1.91□□□□□ -2.1
UFD2P54860 ASE1YOR058C 2658 nt1.9□□□□□ -2.1
UFD2P54860 APL3YBL037W 3078 nt1.9□□□□□ -2.11
UFD2P54860 PMD1YER132C 5262 nt1.9□□□□□ -2.11
UFD2P54860 SWI4YER111C 3282 nt1.9□□□□□ -2.11
UFD2P54860 RPL26BYGR034W 384 nt1.89□□□□□ -2.11
UFD2P54860 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 61.5 ms