Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 PCC1YKR095W-A 267 nt0.02□□□□□ -2.41
LSM7P53905 TAR1YLR154W-C 375 nt0.02□□□□□ -2.41
LSM7P53905 YLR334CYLR334C 381 nt0.02□□□□□ -2.41
LSM7P53905 YPL068CYPL068C 882 nt0.02□□□□□ -2.41
LSM7P53905 snR190snR190 190 nt0.02□□□□□ -2.41
LSM7P53905 RCO1YMR075W 2055 nt0.02□□□□□ -2.41
LSM7P53905 IQG1YPL242C 4488 nt0.01□□□□□ -2.41
LSM7P53905 YDL185C-AYDL185C-A 228 nt0.01□□□□□ -2.41
LSM7P53905 RPS26AYGL189C 360 nt0.01□□□□□ -2.41
LSM7P53905 YOL013W-BYOL013W-B 291 nt0.01□□□□□ -2.41
LSM7P53905 LEE1YPL054W 906 nt0□□□□□ -2.41
LSM7P53905 NNF2YGR089W 2811 nt-0□□□□□ -2.41
LSM7P53905 STE5YDR103W 2754 nt-0□□□□□ -2.41
LSM7P53905 RPS25BYLR333C 327 nt-0.01□□□□□ -2.41
LSM7P53905 YNL303WYNL303W 348 nt-0.01□□□□□ -2.41
LSM7P53905 YCR018C-AYCR018C-A 255 nt-0.02□□□□□ -2.41
LSM7P53905 YEL050W-AYEL050W-A 192 nt-0.02□□□□□ -2.41
LSM7P53905 YMR307C-AYMR307C-A 195 nt-0.02□□□□□ -2.41
LSM7P53905 tN(GUU)QtN(GUU)Q 71 nt-0.03□□□□□ -2.41
LSM7P53905 YJL120WYJL120W 324 nt-0.03□□□□□ -2.41
LSM7P53905 YNL146WYNL146W 303 nt-0.03□□□□□ -2.41
LSM7P53905 tF(GAA)BtF(GAA)B 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)FtF(GAA)F 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)GtF(GAA)G 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)H1tF(GAA)H1 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)H2tF(GAA)H2 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)MtF(GAA)M 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)P1tF(GAA)P1 73 nt-0.04□□□□□ -2.42
LSM7P53905 tF(GAA)P2tF(GAA)P2 73 nt-0.04□□□□□ -2.42
LSM7P53905 STF2YGR008C 255 nt-0.04□□□□□ -2.42
LSM7P53905 YOR186C-AYOR186C-A 210 nt-0.04□□□□□ -2.42
LSM7P53905 NIP1YMR309C 2439 nt-0.07□□□□□ -2.42
LSM7P53905 YDL158CYDL158C 309 nt-0.08□□□□□ -2.42
LSM7P53905 YHR007C-AYHR007C-A 216 nt-0.08□□□□□ -2.42
LSM7P53905 COG8YML071C 1824 nt-0.09□□□□□ -2.42
LSM7P53905 SSS1YDR086C 243 nt-0.1□□□□□ -2.43
LSM7P53905 YHR138CYHR138C 345 nt-0.1□□□□□ -2.43
LSM7P53905 VPS20YMR077C 666 nt-0.1□□□□□ -2.43
LSM7P53905 ULI1YFR026C 510 nt-0.11□□□□□ -2.43
LSM7P53905 HUG1YML058W-A 207 nt-0.12□□□□□ -2.43
LSM7P53905 YAR029WYAR029W 225 nt-0.13□□□□□ -2.43
LSM7P53905 YKU70YMR284W 1809 nt-0.13□□□□□ -2.43
LSM7P53905 COY1YKL179C 2040 nt-0.14□□□□□ -2.43
LSM7P53905 YCR022CYCR022C 345 nt-0.14□□□□□ -2.43
LSM7P53905 RPL35AYDL191W 363 nt-0.14□□□□□ -2.43
LSM7P53905 YHR131W-AYHR131W-A 246 nt-0.14□□□□□ -2.43
LSM7P53905 YLR282CYLR282C 342 nt-0.14□□□□□ -2.43
LSM7P53905 YLR434CYLR434C 384 nt-0.14□□□□□ -2.43
LSM7P53905 YPR092WYPR092W 306 nt-0.14□□□□□ -2.43
LSM7P53905 CSN9YDR179C 489 nt-0.15□□□□□ -2.43
LSM7P53905 YKL136WYKL136W 399 nt-0.15□□□□□ -2.43
LSM7P53905 YLL006W-AYLL006W-A 177 nt-0.15□□□□□ -2.43
LSM7P53905 ATP19YOL077W-A 207 nt-0.15□□□□□ -2.43
LSM7P53905 BUL2YML111W 2763 nt-0.17□□□□□ -2.44
LSM7P53905 YDR354C-AYDR354C-A 144 nt-0.17□□□□□ -2.44
LSM7P53905 YER078W-AYER078W-A 165 nt-0.17□□□□□ -2.44
LSM7P53905 YLR232WYLR232W 348 nt-0.17□□□□□ -2.44
LSM7P53905 YOL014WYOL014W 375 nt-0.17□□□□□ -2.44
LSM7P53905 SOV1YMR066W 2697 nt-0.19□□□□□ -2.44
LSM7P53905 THO2YNL139C 4794 nt-0.19□□□□□ -2.44
LSM7P53905 YEL073CYEL073C 324 nt-0.21□□□□□ -2.44
LSM7P53905 snR45snR45 172 nt-0.21□□□□□ -2.44
LSM7P53905 MYO1YHR023W 5787 nt-0.21□□□□□ -2.44
LSM7P53905 YJL026C-AYJL026C-A 222 nt-0.22□□□□□ -2.44
LSM7P53905 YLR406C-AYLR406C-A 150 nt-0.22□□□□□ -2.44
LSM7P53905 snR189snR189 189 nt-0.22□□□□□ -2.44
LSM7P53905 PRM3YPL192C 402 nt-0.23□□□□□ -2.45
LSM7P53905 HTB2YBL002W 396 nt-0.26□□□□□ -2.45
LSM7P53905 YOR161W-AYOR161W-A 81 nt-0.26□□□□□ -2.45
LSM7P53905 snR8snR8 190 nt-0.27□□□□□ -2.45
LSM7P53905 YAL016C-BYAL016C-B 186 nt-0.27□□□□□ -2.45
LSM7P53905 YGL123C-AYGL123C-A 231 nt-0.28□□□□□ -2.45
LSM7P53905 YKL063CYKL063C 504 nt-0.28□□□□□ -2.45
LSM7P53905 snR128snR128 126 nt-0.28□□□□□ -2.45
LSM7P53905 YEL020C-BYEL020C-B 198 nt-0.29□□□□□ -2.46
LSM7P53905 SNU13YEL026W 381 nt-0.29□□□□□ -2.46
LSM7P53905 RPS27BYHR021C 249 nt-0.29□□□□□ -2.46
LSM7P53905 YJL007CYJL007C 315 nt-0.29□□□□□ -2.46
LSM7P53905 YPL205CYPL205C 345 nt-0.29□□□□□ -2.46
LSM7P53905 BLI1YKL061W 342 nt-0.3□□□□□ -2.46
LSM7P53905 YLR041WYLR041W 321 nt-0.3□□□□□ -2.46
LSM7P53905 YLR202CYLR202C 327 nt-0.3□□□□□ -2.46
LSM7P53905 YDR366CYDR366C 399 nt-0.32□□□□□ -2.46
LSM7P53905 YIL115W-AYIL115W-A 372 nt-0.32□□□□□ -2.46
LSM7P53905 YKL100W-AYKL100W-A 90 nt-0.32□□□□□ -2.46
LSM7P53905 CSE2YNR010W 450 nt-0.32□□□□□ -2.46
LSM7P53905 YER137W-AYER137W-A 306 nt-0.33□□□□□ -2.46
LSM7P53905 YAR053WYAR053W 297 nt-0.33□□□□□ -2.46
LSM7P53905 YBR072C-AYBR072C-A 162 nt-0.34□□□□□ -2.46
LSM7P53905 YOR121CYOR121C 306 nt-0.35□□□□□ -2.47
LSM7P53905 YBR285WYBR285W 435 nt-0.35□□□□□ -2.47
LSM7P53905 QCR9YGR183C 201 nt-0.36□□□□□ -2.47
LSM7P53905 YDR048CYDR048C 315 nt-0.37□□□□□ -2.47
LSM7P53905 YFL063WYFL063W 456 nt-0.37□□□□□ -2.47
LSM7P53905 YMR158W-BYMR158W-B 321 nt-0.38□□□□□ -2.47
LSM7P53905 tW(UCA)QtW(UCA)Q 74 nt-0.39□□□□□ -2.47
LSM7P53905 YMR001C-AYMR001C-A 231 nt-0.39□□□□□ -2.47
LSM7P53905 YER079WYER079W 633 nt-0.4□□□□□ -2.47
LSM7P53905 YBR099CYBR099C 384 nt-0.4□□□□□ -2.47
LSM7P53905 SBH2YER019C-A 267 nt-0.41□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 77.9 ms