Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YDR354C-AYDR354C-A 144 nt1.79□□□□□ -2.12
TY4A-JP47023 POL5YEL055C 3069 nt1.78□□□□□ -2.12
TY4A-JP47023 YNL211CYNL211C 261 nt1.77□□□□□ -2.13
TY4A-JP47023 YOR170WYOR170W 306 nt1.77□□□□□ -2.13
TY4A-JP47023 RSM22YKL155C 1887 nt1.77□□□□□ -2.13
TY4A-JP47023 ALY2YJL084C 3141 nt1.76□□□□□ -2.13
TY4A-JP47023 MSN5YDR335W 3675 nt1.76□□□□□ -2.13
TY4A-JP47023 PAN2YGL094C 3348 nt1.76□□□□□ -2.13
TY4A-JP47023 YOR161W-BYOR161W-B 261 nt1.76□□□□□ -2.13
TY4A-JP47023 COY1YKL179C 2040 nt1.76□□□□□ -2.13
TY4A-JP47023 YCS4YLR272C 3531 nt1.75□□□□□ -2.13
TY4A-JP47023 YDL007C-AYDL007C-A 258 nt1.75□□□□□ -2.13
TY4A-JP47023 PAA1YDR071C 576 nt1.75□□□□□ -2.13
TY4A-JP47023 EST2YLR318W 2655 nt1.75□□□□□ -2.13
TY4A-JP47023 TTI1YKL033W 3117 nt1.74□□□□□ -2.13
TY4A-JP47023 IRA1YBR140C 9279 nt1.74□□□□□ -2.13
TY4A-JP47023 PMP1YCR024C-A 123 nt1.74□□□□□ -2.13
TY4A-JP47023 YJL022WYJL022W 309 nt1.74□□□□□ -2.13
TY4A-JP47023 RPS30BYOR182C 192 nt1.74□□□□□ -2.13
TY4A-JP47023 YOR093CYOR093C 4947 nt1.74□□□□□ -2.13
TY4A-JP47023 ATP8Q0080 147 nt1.73□□□□□ -2.13
TY4A-JP47023 APL3YBL037W 3078 nt1.72□□□□□ -2.13
TY4A-JP47023 FAB1YFR019W 6837 nt1.72□□□□□ -2.13
TY4A-JP47023 YAR009CYAR009C 3591 nt1.72□□□□□ -2.13
TY4A-JP47023 CLU1YMR012W 3834 nt1.71□□□□□ -2.14
TY4A-JP47023 YJL026C-AYJL026C-A 222 nt1.71□□□□□ -2.14
TY4A-JP47023 EAF1YDR359C 2949 nt1.71□□□□□ -2.14
TY4A-JP47023 HAL9YOL089C 3093 nt1.71□□□□□ -2.14
TY4A-JP47023 ANS1YHR126C 480 nt1.7□□□□□ -2.14
TY4A-JP47023 YKL100W-AYKL100W-A 90 nt1.7□□□□□ -2.14
TY4A-JP47023 SEC21YNL287W 2808 nt1.7□□□□□ -2.14
TY4A-JP47023 YCR038W-AYCR038W-A 126 nt1.69□□□□□ -2.14
TY4A-JP47023 YAL067W-AYAL067W-A 228 nt1.69□□□□□ -2.14
TY4A-JP47023 SSK2YNR031C 4740 nt1.68□□□□□ -2.14
TY4A-JP47023 UTP8YGR128C 2142 nt1.68□□□□□ -2.14
TY4A-JP47023 COA6YMR244C-A 315 nt1.68□□□□□ -2.14
TY4A-JP47023 snR14snR14 160 nt1.68□□□□□ -2.14
TY4A-JP47023 YBR221W-AYBR221W-A 105 nt1.68□□□□□ -2.14
TY4A-JP47023 HKR1YDR420W 5409 nt1.67□□□□□ -2.14
TY4A-JP47023 WAR1YML076C 2835 nt1.67□□□□□ -2.14
TY4A-JP47023 MDS3YGL197W 4464 nt1.66□□□□□ -2.14
TY4A-JP47023 STO1YMR125W 2586 nt1.66□□□□□ -2.14
TY4A-JP47023 YHL015W-AYHL015W-A 84 nt1.66□□□□□ -2.14
TY4A-JP47023 COX12YLR038C 252 nt1.66□□□□□ -2.14
TY4A-JP47023 YNL170WYNL170W 396 nt1.66□□□□□ -2.14
TY4A-JP47023 CFT1YDR301W 4074 nt1.65□□□□□ -2.14
TY4A-JP47023 DNF3YMR162C 4971 nt1.65□□□□□ -2.15
TY4A-JP47023 SNU13YEL026W 381 nt1.65□□□□□ -2.15
TY4A-JP47023 AZF1YOR113W 2745 nt1.65□□□□□ -2.15
TY4A-JP47023 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
TY4A-JP47023 YIL002W-AYIL002W-A 210 nt1.64□□□□□ -2.15
TY4A-JP47023 YPL044CYPL044C 549 nt1.64□□□□□ -2.15
TY4A-JP47023 PRP5YBR237W 2550 nt1.64□□□□□ -2.15
TY4A-JP47023 YLR422WYLR422W 5799 nt1.63□□□□□ -2.15
TY4A-JP47023 YGL123C-AYGL123C-A 231 nt1.63□□□□□ -2.15
TY4A-JP47023 SET3YKR029C 2256 nt1.63□□□□□ -2.15
TY4A-JP47023 YBR200W-AYBR200W-A 165 nt1.62□□□□□ -2.15
TY4A-JP47023 NUP145YGL092W 3954 nt1.62□□□□□ -2.15
TY4A-JP47023 SWI4YER111C 3282 nt1.61□□□□□ -2.15
TY4A-JP47023 YGR164WYGR164W 336 nt1.61□□□□□ -2.15
TY4A-JP47023 YIL134C-AYIL134C-A 204 nt1.61□□□□□ -2.15
TY4A-JP47023 CMC4YMR194C-B 222 nt1.6□□□□□ -2.15
TY4A-JP47023 PRP42YDR235W 1635 nt1.59□□□□□ -2.15
TY4A-JP47023 FYV8YGR196C 2454 nt1.58□□□□□ -2.16
TY4A-JP47023 YOR102WYOR102W 351 nt1.58□□□□□ -2.16
TY4A-JP47023 CCH1YGR217W 6120 nt1.58□□□□□ -2.16
TY4A-JP47023 GEA2YEL022W 4380 nt1.58□□□□□ -2.16
TY4A-JP47023 SEC3YER008C 4011 nt1.58□□□□□ -2.16
TY4A-JP47023 PMD1YER132C 5262 nt1.57□□□□□ -2.16
TY4A-JP47023 SDH6YDR379C-A 240 nt1.57□□□□□ -2.16
TY4A-JP47023 RPL26BYGR034W 384 nt1.57□□□□□ -2.16
TY4A-JP47023 NOP9YJL010C 2001 nt1.57□□□□□ -2.16
TY4A-JP47023 BRR2YER172C 6492 nt1.57□□□□□ -2.16
TY4A-JP47023 CDC25YLR310C 4770 nt1.56□□□□□ -2.16
TY4A-JP47023 COX5BYIL111W 456 nt1.56□□□□□ -2.16
TY4A-JP47023 TRM732YMR259C 4263 nt1.56□□□□□ -2.16
TY4A-JP47023 YML002WYML002W 2214 nt1.56□□□□□ -2.16
TY4A-JP47023 ROM2YLR371W 4071 nt1.55□□□□□ -2.16
TY4A-JP47023 YER053C-AYER053C-A 114 nt1.54□□□□□ -2.16
TY4A-JP47023 YLR282CYLR282C 342 nt1.54□□□□□ -2.16
TY4A-JP47023 YBL053WYBL053W 375 nt1.54□□□□□ -2.16
TY4A-JP47023 YLL020CYLL020C 306 nt1.53□□□□□ -2.16
TY4A-JP47023 YOR314W-AYOR314W-A 111 nt1.53□□□□□ -2.16
TY4A-JP47023 PIK1YNL267W 3201 nt1.53□□□□□ -2.17
TY4A-JP47023 PET127YOR017W 2403 nt1.52□□□□□ -2.17
TY4A-JP47023 YOR161W-AYOR161W-A 81 nt1.51□□□□□ -2.17
TY4A-JP47023 RAD9YDR217C 3930 nt1.51□□□□□ -2.17
TY4A-JP47023 YIL020C-AYIL020C-A 339 nt1.5□□□□□ -2.17
TY4A-JP47023 NST1YNL091W 3723 nt1.5□□□□□ -2.17
TY4A-JP47023 BFR2YDR299W 1605 nt1.49□□□□□ -2.17
TY4A-JP47023 CDC31YOR257W 486 nt1.49□□□□□ -2.17
TY4A-JP47023 NUP188YML103C 4968 nt1.48□□□□□ -2.17
TY4A-JP47023 YGL182CYGL182C 324 nt1.47□□□□□ -2.17
TY4A-JP47023 snR190snR190 190 nt1.47□□□□□ -2.17
TY4A-JP47023 FIG2YCR089W 4830 nt1.46□□□□□ -2.18
TY4A-JP47023 CHS6YJL099W 2241 nt1.46□□□□□ -2.18
TY4A-JP47023 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
TY4A-JP47023 snR48snR48 113 nt1.45□□□□□ -2.18
TY4A-JP47023 FYV10YIL097W 1551 nt1.44□□□□□ -2.18
TY4A-JP47023 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms