Protein–RNA interactions for Protein: P43554

SWP82, SWI/SNF global transcription activator complex subunit SWP82, yeastyeast

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWP82P43554 YBR200W-AYBR200W-A 165 nt1.32□□□□□ -2.2
SWP82P43554 NUP188YML103C 4968 nt1.32□□□□□ -2.2
SWP82P43554 ISD11YER048W-A 285 nt1.3□□□□□ -2.2
SWP82P43554 OLI1Q0130 231 nt1.3□□□□□ -2.2
SWP82P43554 YLL020CYLL020C 306 nt1.3□□□□□ -2.2
SWP82P43554 SEC3YER008C 4011 nt1.3□□□□□ -2.2
SWP82P43554 MSN5YDR335W 3675 nt1.29□□□□□ -2.2
SWP82P43554 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
SWP82P43554 EAF1YDR359C 2949 nt1.29□□□□□ -2.2
SWP82P43554 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
SWP82P43554 CDC25YLR310C 4770 nt1.28□□□□□ -2.2
SWP82P43554 YDR354C-AYDR354C-A 144 nt1.28□□□□□ -2.2
SWP82P43554 YOR302WYOR302W 78 nt1.28□□□□□ -2.2
SWP82P43554 MDS3YGL197W 4464 nt1.28□□□□□ -2.2
SWP82P43554 APL1YJR005W 2103 nt1.28□□□□□ -2.2
SWP82P43554 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
SWP82P43554 CAT8YMR280C 4302 nt1.27□□□□□ -2.21
SWP82P43554 YDR406W-AYDR406W-A 246 nt1.27□□□□□ -2.21
SWP82P43554 CLU1YMR012W 3834 nt1.26□□□□□ -2.21
SWP82P43554 YDL196WYDL196W 330 nt1.26□□□□□ -2.21
SWP82P43554 ULI1YFR026C 510 nt1.26□□□□□ -2.21
SWP82P43554 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
SWP82P43554 APQ12YIL040W 417 nt1.25□□□□□ -2.21
SWP82P43554 GEA2YEL022W 4380 nt1.24□□□□□ -2.21
SWP82P43554 TRM732YMR259C 4263 nt1.24□□□□□ -2.21
SWP82P43554 PAA1YDR071C 576 nt1.24□□□□□ -2.21
SWP82P43554 ROM2YLR371W 4071 nt1.23□□□□□ -2.21
SWP82P43554 YJL026C-AYJL026C-A 222 nt1.23□□□□□ -2.21
SWP82P43554 YNL211CYNL211C 261 nt1.23□□□□□ -2.21
SWP82P43554 YAL067W-AYAL067W-A 228 nt1.22□□□□□ -2.21
SWP82P43554 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
SWP82P43554 CDC31YOR257W 486 nt1.22□□□□□ -2.21
SWP82P43554 YEL014CYEL014C 306 nt1.21□□□□□ -2.22
SWP82P43554 NOP9YJL010C 2001 nt1.2□□□□□ -2.22
SWP82P43554 RPL33BYOR234C 324 nt1.2□□□□□ -2.22
SWP82P43554 YBR131C-AYBR131C-A 90 nt1.2□□□□□ -2.22
SWP82P43554 STB6YKL072W 2301 nt1.19□□□□□ -2.22
SWP82P43554 YOR345CYOR345C 351 nt1.19□□□□□ -2.22
SWP82P43554 YPL044CYPL044C 549 nt1.19□□□□□ -2.22
SWP82P43554 NUP157YER105C 4176 nt1.18□□□□□ -2.22
SWP82P43554 RAD9YDR217C 3930 nt1.17□□□□□ -2.22
SWP82P43554 TTI1YKL033W 3117 nt1.17□□□□□ -2.22
SWP82P43554 YDL185C-AYDL185C-A 228 nt1.17□□□□□ -2.22
SWP82P43554 RPL26BYGR034W 384 nt1.17□□□□□ -2.22
SWP82P43554 PAM16YJL104W 450 nt1.17□□□□□ -2.22
SWP82P43554 CDC39YCR093W 6327 nt1.17□□□□□ -2.22
SWP82P43554 YCR018C-AYCR018C-A 255 nt1.16□□□□□ -2.22
SWP82P43554 YJR029WYJR029W 5268 nt1.15□□□□□ -2.22
SWP82P43554 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.22
SWP82P43554 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
SWP82P43554 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
SWP82P43554 RPS30BYOR182C 192 nt1.15□□□□□ -2.23
SWP82P43554 YNL337WYNL337W 255 nt1.14□□□□□ -2.23
SWP82P43554 YKL100W-AYKL100W-A 90 nt1.13□□□□□ -2.23
SWP82P43554 YNL097C-BYNL097C-B 123 nt1.13□□□□□ -2.23
SWP82P43554 YGL123C-AYGL123C-A 231 nt1.12□□□□□ -2.23
SWP82P43554 COX12YLR038C 252 nt1.12□□□□□ -2.23
SWP82P43554 NUP192YJL039C 5052 nt1.12□□□□□ -2.23
SWP82P43554 COY1YKL179C 2040 nt1.11□□□□□ -2.23
SWP82P43554 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
SWP82P43554 NST1YNL091W 3723 nt1.09□□□□□ -2.24
SWP82P43554 MSH3YCR092C 3057 nt1.08□□□□□ -2.24
SWP82P43554 YCR038W-AYCR038W-A 126 nt1.08□□□□□ -2.24
SWP82P43554 YLR282CYLR282C 342 nt1.08□□□□□ -2.24
SWP82P43554 LAA1YJL207C 6045 nt1.08□□□□□ -2.24
SWP82P43554 YFR012W-AYFR012W-A 87 nt1.07□□□□□ -2.24
SWP82P43554 COX5BYIL111W 456 nt1.07□□□□□ -2.24
SWP82P43554 YIL134C-AYIL134C-A 204 nt1.07□□□□□ -2.24
SWP82P43554 snR190snR190 190 nt1.07□□□□□ -2.24
SWP82P43554 HAL9YOL089C 3093 nt1.07□□□□□ -2.24
SWP82P43554 YML002WYML002W 2214 nt1.06□□□□□ -2.24
SWP82P43554 YIL002W-AYIL002W-A 210 nt1.06□□□□□ -2.24
SWP82P43554 snR52snR52 92 nt1.06□□□□□ -2.24
SWP82P43554 YLR342W-AYLR342W-A 174 nt1.05□□□□□ -2.24
SWP82P43554 YOR161W-AYOR161W-A 81 nt1.05□□□□□ -2.24
SWP82P43554 snR46snR46 197 nt1.05□□□□□ -2.24
SWP82P43554 SEC8YPR055W 3198 nt1.05□□□□□ -2.24
SWP82P43554 UTP8YGR128C 2142 nt1.04□□□□□ -2.24
SWP82P43554 KAP120YPL125W 3099 nt1.03□□□□□ -2.24
SWP82P43554 YER053C-AYER053C-A 114 nt1.03□□□□□ -2.24
SWP82P43554 SPT7YBR081C 3999 nt1.03□□□□□ -2.25
SWP82P43554 PMP1YCR024C-A 123 nt1.02□□□□□ -2.25
SWP82P43554 YEL073CYEL073C 324 nt1.02□□□□□ -2.25
SWP82P43554 ASE1YOR058C 2658 nt1.02□□□□□ -2.25
SWP82P43554 BEM2YER155C 6504 nt1.01□□□□□ -2.25
SWP82P43554 BFR2YDR299W 1605 nt1□□□□□ -2.25
SWP82P43554 PRP16YKR086W 3216 nt1□□□□□ -2.25
SWP82P43554 YLR399W-AYLR399W-A 105 nt1□□□□□ -2.25
SWP82P43554 YJL182CYJL182C 318 nt0.99□□□□□ -2.25
SWP82P43554 FYV10YIL097W 1551 nt0.99□□□□□ -2.25
SWP82P43554 PRP42YDR235W 1635 nt0.98□□□□□ -2.25
SWP82P43554 PRP5YBR237W 2550 nt0.98□□□□□ -2.25
SWP82P43554 YJL150WYJL150W 303 nt0.98□□□□□ -2.25
SWP82P43554 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
SWP82P43554 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms