Protein–RNA interactions for Protein: P39986

SPF1, Manganese-transporting ATPase 1, yeastyeast

Known RBP Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPF1P39986 KAP122YGL016W 3246 nt1.85□□□□□ -2.11
SPF1P39986 PMP1YCR024C-A 123 nt1.85□□□□□ -2.11
SPF1P39986 Q0092Q0092 141 nt1.85□□□□□ -2.11
SPF1P39986 YNL211CYNL211C 261 nt1.85□□□□□ -2.11
SPF1P39986 RPS30BYOR182C 192 nt1.85□□□□□ -2.11
SPF1P39986 BST1YFL025C 3090 nt1.85□□□□□ -2.11
SPF1P39986 SAC3YDR159W 3906 nt1.84□□□□□ -2.11
SPF1P39986 YOR093CYOR093C 4947 nt1.84□□□□□ -2.11
SPF1P39986 RSM22YKL155C 1887 nt1.84□□□□□ -2.12
SPF1P39986 YOR019WYOR019W 2193 nt1.83□□□□□ -2.12
SPF1P39986 MDS3YGL197W 4464 nt1.83□□□□□ -2.12
SPF1P39986 YAL067W-AYAL067W-A 228 nt1.83□□□□□ -2.12
SPF1P39986 POL5YEL055C 3069 nt1.82□□□□□ -2.12
SPF1P39986 COX12YLR038C 252 nt1.82□□□□□ -2.12
SPF1P39986 COA6YMR244C-A 315 nt1.82□□□□□ -2.12
SPF1P39986 YLR419WYLR419W 4308 nt1.82□□□□□ -2.12
SPF1P39986 YDL007C-AYDL007C-A 258 nt1.8□□□□□ -2.12
SPF1P39986 YIL134C-AYIL134C-A 204 nt1.8□□□□□ -2.12
SPF1P39986 SET3YKR029C 2256 nt1.8□□□□□ -2.12
SPF1P39986 STO1YMR125W 2586 nt1.8□□□□□ -2.12
SPF1P39986 SWI4YER111C 3282 nt1.79□□□□□ -2.12
SPF1P39986 YMR272W-BYMR272W-B 108 nt1.79□□□□□ -2.12
SPF1P39986 YBR221W-AYBR221W-A 105 nt1.79□□□□□ -2.12
SPF1P39986 DNF3YMR162C 4971 nt1.78□□□□□ -2.12
SPF1P39986 YCR038W-AYCR038W-A 126 nt1.78□□□□□ -2.12
SPF1P39986 tT(UGU)HtT(UGU)H 72 nt1.78□□□□□ -2.12
SPF1P39986 EAF1YDR359C 2949 nt1.78□□□□□ -2.12
SPF1P39986 YIL002W-AYIL002W-A 210 nt1.76□□□□□ -2.13
SPF1P39986 YPL044CYPL044C 549 nt1.76□□□□□ -2.13
SPF1P39986 NUP145YGL092W 3954 nt1.75□□□□□ -2.13
SPF1P39986 WAR1YML076C 2835 nt1.75□□□□□ -2.13
SPF1P39986 ATP8Q0080 147 nt1.75□□□□□ -2.13
SPF1P39986 YKL100W-AYKL100W-A 90 nt1.75□□□□□ -2.13
SPF1P39986 YOR170WYOR170W 306 nt1.75□□□□□ -2.13
SPF1P39986 AZF1YOR113W 2745 nt1.75□□□□□ -2.13
SPF1P39986 PEP1YBL017C 4740 nt1.75□□□□□ -2.13
SPF1P39986 APL3YBL037W 3078 nt1.74□□□□□ -2.13
SPF1P39986 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
SPF1P39986 YGL123C-AYGL123C-A 231 nt1.73□□□□□ -2.13
SPF1P39986 CMC4YMR194C-B 222 nt1.73□□□□□ -2.13
SPF1P39986 YBR200W-AYBR200W-A 165 nt1.73□□□□□ -2.13
SPF1P39986 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
SPF1P39986 EST2YLR318W 2655 nt1.73□□□□□ -2.13
SPF1P39986 ROM2YLR371W 4071 nt1.72□□□□□ -2.13
SPF1P39986 CDC25YLR310C 4770 nt1.72□□□□□ -2.13
SPF1P39986 SXM1YDR395W 2835 nt1.72□□□□□ -2.13
SPF1P39986 CLU1YMR012W 3834 nt1.71□□□□□ -2.14
SPF1P39986 NOP9YJL010C 2001 nt1.71□□□□□ -2.14
SPF1P39986 PMD1YER132C 5262 nt1.7□□□□□ -2.14
SPF1P39986 VPS15YBR097W 4365 nt1.69□□□□□ -2.14
SPF1P39986 PRP5YBR237W 2550 nt1.68□□□□□ -2.14
SPF1P39986 CFT1YDR301W 4074 nt1.68□□□□□ -2.14
SPF1P39986 PRP42YDR235W 1635 nt1.67□□□□□ -2.14
SPF1P39986 NUP188YML103C 4968 nt1.67□□□□□ -2.14
SPF1P39986 COX5BYIL111W 456 nt1.67□□□□□ -2.14
SPF1P39986 UTP8YGR128C 2142 nt1.67□□□□□ -2.14
SPF1P39986 SNU13YEL026W 381 nt1.66□□□□□ -2.14
SPF1P39986 YER053C-AYER053C-A 114 nt1.66□□□□□ -2.14
SPF1P39986 YNL170WYNL170W 396 nt1.66□□□□□ -2.14
SPF1P39986 RPL26BYGR034W 384 nt1.65□□□□□ -2.15
SPF1P39986 YLR282CYLR282C 342 nt1.65□□□□□ -2.15
SPF1P39986 MSN5YDR335W 3675 nt1.65□□□□□ -2.15
SPF1P39986 TRM732YMR259C 4263 nt1.64□□□□□ -2.15
SPF1P39986 YGR164WYGR164W 336 nt1.64□□□□□ -2.15
SPF1P39986 YHL015W-AYHL015W-A 84 nt1.64□□□□□ -2.15
SPF1P39986 ANS1YHR126C 480 nt1.64□□□□□ -2.15
SPF1P39986 YLL020CYLL020C 306 nt1.64□□□□□ -2.15
SPF1P39986 SEC3YER008C 4011 nt1.64□□□□□ -2.15
SPF1P39986 YOR161W-AYOR161W-A 81 nt1.63□□□□□ -2.15
SPF1P39986 GEA2YEL022W 4380 nt1.63□□□□□ -2.15
SPF1P39986 YML002WYML002W 2214 nt1.63□□□□□ -2.15
SPF1P39986 BFR2YDR299W 1605 nt1.62□□□□□ -2.15
SPF1P39986 SDH6YDR379C-A 240 nt1.61□□□□□ -2.15
SPF1P39986 YOR102WYOR102W 351 nt1.61□□□□□ -2.15
SPF1P39986 MEC1YBR136W 7107 nt1.59□□□□□ -2.16
SPF1P39986 CHS1YNL192W 3396 nt1.59□□□□□ -2.16
SPF1P39986 NUP192YJL039C 5052 nt1.59□□□□□ -2.16
SPF1P39986 NUP157YER105C 4176 nt1.58□□□□□ -2.16
SPF1P39986 FIG2YCR089W 4830 nt1.58□□□□□ -2.16
SPF1P39986 snR190snR190 190 nt1.57□□□□□ -2.16
SPF1P39986 YBL053WYBL053W 375 nt1.55□□□□□ -2.16
SPF1P39986 snR48snR48 113 nt1.55□□□□□ -2.16
SPF1P39986 BRR2YER172C 6492 nt1.55□□□□□ -2.16
SPF1P39986 STB6YKL072W 2301 nt1.55□□□□□ -2.16
SPF1P39986 YFR012W-AYFR012W-A 87 nt1.54□□□□□ -2.16
SPF1P39986 YGL182CYGL182C 324 nt1.54□□□□□ -2.16
SPF1P39986 YOR314W-AYOR314W-A 111 nt1.54□□□□□ -2.16
SPF1P39986 FYV10YIL097W 1551 nt1.52□□□□□ -2.17
SPF1P39986 CDC39YCR093W 6327 nt1.52□□□□□ -2.17
SPF1P39986 SEC21YNL287W 2808 nt1.52□□□□□ -2.17
SPF1P39986 ASE1YOR058C 2658 nt1.51□□□□□ -2.17
SPF1P39986 YLR041WYLR041W 321 nt1.51□□□□□ -2.17
SPF1P39986 CAT8YMR280C 4302 nt1.51□□□□□ -2.17
SPF1P39986 SEC8YPR055W 3198 nt1.51□□□□□ -2.17
SPF1P39986 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
SPF1P39986 YIL020C-AYIL020C-A 339 nt1.49□□□□□ -2.17
SPF1P39986 YBL039C-AYBL039C-A 84 nt1.49□□□□□ -2.17
SPF1P39986 TAH1YCR060W 336 nt1.48□□□□□ -2.17
SPF1P39986 CHS6YJL099W 2241 nt1.47□□□□□ -2.17
SPF1P39986 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 100.4 ms