Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 YAL067W-AYAL067W-A 228 nt1.88□□□□□ -2.11
VAC8P39968 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
VAC8P39968 TTI1YKL033W 3117 nt1.87□□□□□ -2.11
VAC8P39968 YMR272W-BYMR272W-B 108 nt1.87□□□□□ -2.11
VAC8P39968 UBP2YOR124C 3819 nt1.87□□□□□ -2.11
VAC8P39968 snR14snR14 160 nt1.87□□□□□ -2.11
VAC8P39968 TRS65YGR166W 1683 nt1.86□□□□□ -2.11
VAC8P39968 PAA1YDR071C 576 nt1.86□□□□□ -2.11
VAC8P39968 RSM22YKL155C 1887 nt1.86□□□□□ -2.11
VAC8P39968 SET3YKR029C 2256 nt1.85□□□□□ -2.11
VAC8P39968 EST2YLR318W 2655 nt1.85□□□□□ -2.11
VAC8P39968 snR52snR52 92 nt1.84□□□□□ -2.11
VAC8P39968 IRC20YLR247C 4671 nt1.83□□□□□ -2.12
VAC8P39968 COY1YKL179C 2040 nt1.83□□□□□ -2.12
VAC8P39968 CHS1YNL192W 3396 nt1.83□□□□□ -2.12
VAC8P39968 YNL211CYNL211C 261 nt1.83□□□□□ -2.12
VAC8P39968 AZF1YOR113W 2745 nt1.82□□□□□ -2.12
VAC8P39968 SEC3YER008C 4011 nt1.82□□□□□ -2.12
VAC8P39968 STO1YMR125W 2586 nt1.82□□□□□ -2.12
VAC8P39968 APL3YBL037W 3078 nt1.82□□□□□ -2.12
VAC8P39968 YOR381W-AYOR381W-A 168 nt1.82□□□□□ -2.12
VAC8P39968 EAF1YDR359C 2949 nt1.81□□□□□ -2.12
VAC8P39968 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
VAC8P39968 COX12YLR038C 252 nt1.81□□□□□ -2.12
VAC8P39968 COA6YMR244C-A 315 nt1.81□□□□□ -2.12
VAC8P39968 SMC1YFL008W 3678 nt1.8□□□□□ -2.12
VAC8P39968 YMR247W-AYMR247W-A 144 nt1.8□□□□□ -2.12
VAC8P39968 RPS30BYOR182C 192 nt1.8□□□□□ -2.12
VAC8P39968 YBR221W-AYBR221W-A 105 nt1.8□□□□□ -2.12
VAC8P39968 MON2YNL297C 4911 nt1.79□□□□□ -2.12
VAC8P39968 YIL134C-AYIL134C-A 204 nt1.79□□□□□ -2.12
VAC8P39968 YKL100W-AYKL100W-A 90 nt1.79□□□□□ -2.12
VAC8P39968 YNL338WYNL338W 159 nt1.79□□□□□ -2.12
VAC8P39968 YBR200W-AYBR200W-A 165 nt1.79□□□□□ -2.12
VAC8P39968 WAR1YML076C 2835 nt1.77□□□□□ -2.13
VAC8P39968 PMP1YCR024C-A 123 nt1.77□□□□□ -2.13
VAC8P39968 SXM1YDR395W 2835 nt1.77□□□□□ -2.13
VAC8P39968 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
VAC8P39968 BRR2YER172C 6492 nt1.76□□□□□ -2.13
VAC8P39968 NUP192YJL039C 5052 nt1.76□□□□□ -2.13
VAC8P39968 YIL002W-AYIL002W-A 210 nt1.76□□□□□ -2.13
VAC8P39968 NOP9YJL010C 2001 nt1.76□□□□□ -2.13
VAC8P39968 CMC4YMR194C-B 222 nt1.75□□□□□ -2.13
VAC8P39968 FIG2YCR089W 4830 nt1.75□□□□□ -2.13
VAC8P39968 TRM732YMR259C 4263 nt1.74□□□□□ -2.13
VAC8P39968 MDS3YGL197W 4464 nt1.74□□□□□ -2.13
VAC8P39968 MEC1YBR136W 7107 nt1.74□□□□□ -2.13
VAC8P39968 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
VAC8P39968 BPH1YCR032W 6504 nt1.73□□□□□ -2.13
VAC8P39968 NUP157YER105C 4176 nt1.73□□□□□ -2.13
VAC8P39968 COX5BYIL111W 456 nt1.72□□□□□ -2.13
VAC8P39968 YPL044CYPL044C 549 nt1.72□□□□□ -2.13
VAC8P39968 VPS15YBR097W 4365 nt1.71□□□□□ -2.14
VAC8P39968 YGL123C-AYGL123C-A 231 nt1.71□□□□□ -2.14
VAC8P39968 YLL020CYLL020C 306 nt1.71□□□□□ -2.14
VAC8P39968 YLR419WYLR419W 4308 nt1.71□□□□□ -2.14
VAC8P39968 RPL26BYGR034W 384 nt1.7□□□□□ -2.14
VAC8P39968 ANS1YHR126C 480 nt1.7□□□□□ -2.14
VAC8P39968 YCR038W-AYCR038W-A 126 nt1.69□□□□□ -2.14
VAC8P39968 RPM2YML091C 3609 nt1.69□□□□□ -2.14
VAC8P39968 NUP188YML103C 4968 nt1.68□□□□□ -2.14
VAC8P39968 KAP120YPL125W 3099 nt1.66□□□□□ -2.14
VAC8P39968 YLR282CYLR282C 342 nt1.64□□□□□ -2.15
VAC8P39968 BFR2YDR299W 1605 nt1.64□□□□□ -2.15
VAC8P39968 PRP5YBR237W 2550 nt1.63□□□□□ -2.15
VAC8P39968 PRP42YDR235W 1635 nt1.63□□□□□ -2.15
VAC8P39968 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
VAC8P39968 SNU13YEL026W 381 nt1.63□□□□□ -2.15
VAC8P39968 STB6YKL072W 2301 nt1.63□□□□□ -2.15
VAC8P39968 YML002WYML002W 2214 nt1.63□□□□□ -2.15
VAC8P39968 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
VAC8P39968 YDL007C-AYDL007C-A 258 nt1.61□□□□□ -2.15
VAC8P39968 YER053C-AYER053C-A 114 nt1.61□□□□□ -2.15
VAC8P39968 UTP8YGR128C 2142 nt1.6□□□□□ -2.15
VAC8P39968 Q0092Q0092 141 nt1.6□□□□□ -2.15
VAC8P39968 YLR041WYLR041W 321 nt1.6□□□□□ -2.15
VAC8P39968 PMD1YER132C 5262 nt1.6□□□□□ -2.15
VAC8P39968 PRP16YKR086W 3216 nt1.59□□□□□ -2.15
VAC8P39968 ASE1YOR058C 2658 nt1.59□□□□□ -2.16
VAC8P39968 SEC8YPR055W 3198 nt1.58□□□□□ -2.16
VAC8P39968 YOR161W-AYOR161W-A 81 nt1.58□□□□□ -2.16
VAC8P39968 snR190snR190 190 nt1.58□□□□□ -2.16
VAC8P39968 CDC39YCR093W 6327 nt1.58□□□□□ -2.16
VAC8P39968 MSH3YCR092C 3057 nt1.57□□□□□ -2.16
VAC8P39968 IRA1YBR140C 9279 nt1.56□□□□□ -2.16
VAC8P39968 SEC21YNL287W 2808 nt1.56□□□□□ -2.16
VAC8P39968 YOR170WYOR170W 306 nt1.56□□□□□ -2.16
VAC8P39968 CDC31YOR257W 486 nt1.56□□□□□ -2.16
VAC8P39968 ATP8Q0080 147 nt1.55□□□□□ -2.16
VAC8P39968 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
VAC8P39968 snR48snR48 113 nt1.54□□□□□ -2.16
VAC8P39968 RAD9YDR217C 3930 nt1.54□□□□□ -2.16
VAC8P39968 YFR012W-AYFR012W-A 87 nt1.53□□□□□ -2.16
VAC8P39968 YHL015W-AYHL015W-A 84 nt1.52□□□□□ -2.17
VAC8P39968 YLR399W-AYLR399W-A 105 nt1.52□□□□□ -2.17
VAC8P39968 YOR102WYOR102W 351 nt1.51□□□□□ -2.17
VAC8P39968 GEA2YEL022W 4380 nt1.51□□□□□ -2.17
VAC8P39968 YGL182CYGL182C 324 nt1.5□□□□□ -2.17
VAC8P39968 YGR164WYGR164W 336 nt1.5□□□□□ -2.17
VAC8P39968 FYV10YIL097W 1551 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms