Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YPR010C-AYPR010C-A 219 nt-1.9□□□□□ -2.71
TRA1P38811 SRB7YDR308C 423 nt-1.91□□□□□ -2.71
TRA1P38811 snR74snR74 88 nt-1.91□□□□□ -2.72
TRA1P38811 YJL135WYJL135W 318 nt-1.91□□□□□ -2.72
TRA1P38811 ATP15YPL271W 189 nt-1.91□□□□□ -2.72
TRA1P38811 SDS22YKL193C 1017 nt-1.91□□□□□ -2.72
TRA1P38811 GOS1YHL031C 672 nt-1.92□□□□□ -2.72
TRA1P38811 YOR121CYOR121C 306 nt-1.92□□□□□ -2.72
TRA1P38811 RPL29YFR032C-A 180 nt-1.92□□□□□ -2.72
TRA1P38811 YGL015CYGL015C 393 nt-1.92□□□□□ -2.72
TRA1P38811 YPL229WYPL229W 621 nt-1.93□□□□□ -2.72
TRA1P38811 YCR024C-BYCR024C-B 267 nt-1.95□□□□□ -2.72
TRA1P38811 YMR304C-AYMR304C-A 351 nt-1.95□□□□□ -2.72
TRA1P38811 YOR192C-CYOR192C-C 237 nt-1.96□□□□□ -2.72
TRA1P38811 YPR099CYPR099C 357 nt-1.97□□□□□ -2.73
TRA1P38811 YDR524C-AYDR524C-A 120 nt-1.98□□□□□ -2.73
TRA1P38811 CMS1YLR003C 876 nt-1.99□□□□□ -2.73
TRA1P38811 RUF20RUF20 443 nt-1.99□□□□□ -2.73
TRA1P38811 YPL261CYPL261C 309 nt-1.99□□□□□ -2.73
TRA1P38811 snR5snR5 204 nt-1.99□□□□□ -2.73
TRA1P38811 MRPL25YGR076C 474 nt-1.99□□□□□ -2.73
TRA1P38811 YBL008W-AYBL008W-A 240 nt-2□□□□□ -2.73
TRA1P38811 YCR018C-AYCR018C-A 255 nt-2□□□□□ -2.73
TRA1P38811 YLR146W-AYLR146W-A 189 nt-2.01□□□□□ -2.73
TRA1P38811 YBR285WYBR285W 435 nt-2.01□□□□□ -2.73
TRA1P38811 YKL044WYKL044W 321 nt-2.02□□□□□ -2.73
TRA1P38811 YKL115CYKL115C 393 nt-2.02□□□□□ -2.73
TRA1P38811 YLR264C-AYLR264C-A 117 nt-2.02□□□□□ -2.73
TRA1P38811 ATP20YPR020W 348 nt-2.02□□□□□ -2.73
TRA1P38811 YGR240C-AYGR240C-A 201 nt-2.03□□□□□ -2.73
TRA1P38811 YGL052WYGL052W 306 nt-2.04□□□□□ -2.74
TRA1P38811 YER138W-AYER138W-A 105 nt-2.06□□□□□ -2.74
TRA1P38811 YOR170WYOR170W 306 nt-2.07□□□□□ -2.74
TRA1P38811 YPR092WYPR092W 306 nt-2.07□□□□□ -2.74
TRA1P38811 YDL185C-AYDL185C-A 228 nt-2.07□□□□□ -2.74
TRA1P38811 JLP2YMR132C 627 nt-2.07□□□□□ -2.74
TRA1P38811 SPC24YMR117C 642 nt-2.08□□□□□ -2.74
TRA1P38811 YJL032WYJL032W 315 nt-2.08□□□□□ -2.74
TRA1P38811 YDR269CYDR269C 324 nt-2.09□□□□□ -2.74
TRA1P38811 YBR051WYBR051W 351 nt-2.11□□□□□ -2.75
TRA1P38811 CDC65tQ(CUG)M 72 nt-2.11□□□□□ -2.75
TRA1P38811 YFL012WYFL012W 447 nt-2.11□□□□□ -2.75
TRA1P38811 YGL239CYGL239C 315 nt-2.12□□□□□ -2.75
TRA1P38811 YGR228WYGR228W 345 nt-2.12□□□□□ -2.75
TRA1P38811 RPS30AYLR287C-A 192 nt-2.12□□□□□ -2.75
TRA1P38811 YML047W-AYML047W-A 366 nt-2.12□□□□□ -2.75
TRA1P38811 SPO12YHR152W 522 nt-2.13□□□□□ -2.75
TRA1P38811 YOR309CYOR309C 381 nt-2.13□□□□□ -2.75
TRA1P38811 MND1YGL183C 660 nt-2.14□□□□□ -2.75
TRA1P38811 YOR011W-AYOR011W-A 207 nt-2.14□□□□□ -2.75
TRA1P38811 YDR290WYDR290W 330 nt-2.14□□□□□ -2.75
TRA1P38811 snR39BsnR39B 96 nt-2.14□□□□□ -2.75
TRA1P38811 COX7YMR256C 183 nt-2.15□□□□□ -2.75
TRA1P38811 YER046W-AYER046W-A 330 nt-2.16□□□□□ -2.76
TRA1P38811 YGR025WYGR025W 303 nt-2.16□□□□□ -2.76
TRA1P38811 MRPL32YCR003W 552 nt-2.17□□□□□ -2.76
TRA1P38811 YNL058CYNL058C 951 nt-2.17□□□□□ -2.76
TRA1P38811 YFR009W-AYFR009W-A 258 nt-2.18□□□□□ -2.76
TRA1P38811 YNL205CYNL205C 423 nt-2.18□□□□□ -2.76
TRA1P38811 YER053C-AYER053C-A 114 nt-2.19□□□□□ -2.76
TRA1P38811 YLR202CYLR202C 327 nt-2.2□□□□□ -2.76
TRA1P38811 RPL22BYFL034C-A 369 nt-2.2□□□□□ -2.76
TRA1P38811 YAL069WYAL069W 315 nt-2.21□□□□□ -2.76
TRA1P38811 RSM18YER050C 417 nt-2.22□□□□□ -2.76
TRA1P38811 RPS27BYHR021C 249 nt-2.22□□□□□ -2.76
TRA1P38811 DFG10YIL049W 762 nt-2.22□□□□□ -2.77
TRA1P38811 CUP1-1YHR053C 186 nt-2.22□□□□□ -2.77
TRA1P38811 CUP1-2YHR055C 186 nt-2.22□□□□□ -2.77
TRA1P38811 snR79snR79 84 nt-2.24□□□□□ -2.77
TRA1P38811 BI2Q0110 1272 nt-2.24□□□□□ -2.77
TRA1P38811 YMR172C-AYMR172C-A 384 nt-2.26□□□□□ -2.77
TRA1P38811 SDH6YDR379C-A 240 nt-2.27□□□□□ -2.77
TRA1P38811 SMD2YLR275W 333 nt-2.28□□□□□ -2.77
TRA1P38811 YGL006W-AYGL006W-A 111 nt-2.29□□□□□ -2.78
TRA1P38811 YKL100W-AYKL100W-A 90 nt-2.3□□□□□ -2.78
TRA1P38811 YPT6YLR262C 648 nt-2.31□□□□□ -2.78
TRA1P38811 snR51snR51 107 nt-2.32□□□□□ -2.78
TRA1P38811 YKL202WYKL202W 582 nt-2.32□□□□□ -2.78
TRA1P38811 tT(UGU)Q1tT(UGU)Q1 76 nt-2.33□□□□□ -2.78
TRA1P38811 15S_rRNA15S_rRNA 1649 nt-2.34□□□□□ -2.78
TRA1P38811 YAR029WYAR029W 225 nt-2.34□□□□□ -2.78
TRA1P38811 YER090C-AYER090C-A 90 nt-2.34□□□□□ -2.78
TRA1P38811 YNL266WYNL266W 420 nt-2.34□□□□□ -2.78
TRA1P38811 POP7YBR167C 423 nt-2.35□□□□□ -2.79
TRA1P38811 CWC23YGL128C 852 nt-2.35□□□□□ -2.79
TRA1P38811 ATP19YOL077W-A 207 nt-2.36□□□□□ -2.79
TRA1P38811 YPR074W-AYPR074W-A 171 nt-2.36□□□□□ -2.79
TRA1P38811 CSE2YNR010W 450 nt-2.36□□□□□ -2.79
TRA1P38811 YDR048CYDR048C 315 nt-2.37□□□□□ -2.79
TRA1P38811 snR72snR72 98 nt-2.38□□□□□ -2.79
TRA1P38811 tQ(UUG)QtQ(UUG)Q 76 nt-2.39□□□□□ -2.79
TRA1P38811 AIM29YKR074W 468 nt-2.39□□□□□ -2.79
TRA1P38811 YOL083C-AYOL083C-A 141 nt-2.4□□□□□ -2.79
TRA1P38811 SGF11YPL047W 300 nt-2.4□□□□□ -2.79
TRA1P38811 IRC13YOR235W 315 nt-2.41□□□□□ -2.8
TRA1P38811 YJR140W-AYJR140W-A 150 nt-2.41□□□□□ -2.8
TRA1P38811 YBL107W-AYBL107W-A 105 nt-2.42□□□□□ -2.8
TRA1P38811 YJL086CYJL086C 369 nt-2.42□□□□□ -2.8
TRA1P38811 YLR456WYLR456W 615 nt-2.43□□□□□ -2.8
TRA1P38811 YIM2YMR151W 438 nt-2.44□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms