Protein–RNA interactions for Protein: P38286

IFA38, Very-long-chain 3-oxoacyl-CoA reductase, yeastyeast

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IFA38P38286 YOR072W-BYOR072W-B 162 nt1.26□□□□□ -2.21
IFA38P38286 snR55snR55 98 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
IFA38P38286 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
IFA38P38286 YGL188C-AYGL188C-A 141 nt1.25□□□□□ -2.21
IFA38P38286 YMR307C-AYMR307C-A 195 nt1.24□□□□□ -2.21
IFA38P38286 SGF11YPL047W 300 nt1.24□□□□□ -2.21
IFA38P38286 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
IFA38P38286 APL1YJR005W 2103 nt1.23□□□□□ -2.21
IFA38P38286 ISD11YER048W-A 285 nt1.22□□□□□ -2.21
IFA38P38286 tV(UAC)BtV(UAC)B 74 nt1.22□□□□□ -2.21
IFA38P38286 tV(UAC)DtV(UAC)D 74 nt1.22□□□□□ -2.21
IFA38P38286 YOL155W-AYOL155W-A 135 nt1.22□□□□□ -2.21
IFA38P38286 snR8snR8 190 nt1.21□□□□□ -2.22
IFA38P38286 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
IFA38P38286 YPL044CYPL044C 549 nt1.21□□□□□ -2.22
IFA38P38286 NOP9YJL010C 2001 nt1.21□□□□□ -2.22
IFA38P38286 IML1YJR138W 4755 nt1.2□□□□□ -2.22
IFA38P38286 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
IFA38P38286 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
IFA38P38286 NST1YNL091W 3723 nt1.19□□□□□ -2.22
IFA38P38286 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
IFA38P38286 RPL26BYGR034W 384 nt1.18□□□□□ -2.22
IFA38P38286 YAL067W-AYAL067W-A 228 nt1.18□□□□□ -2.22
IFA38P38286 YNL211CYNL211C 261 nt1.18□□□□□ -2.22
IFA38P38286 GEA2YEL022W 4380 nt1.18□□□□□ -2.22
IFA38P38286 YDR354C-AYDR354C-A 144 nt1.17□□□□□ -2.22
IFA38P38286 YLL019W-AYLL019W-A 93 nt1.17□□□□□ -2.22
IFA38P38286 MDS3YGL197W 4464 nt1.17□□□□□ -2.22
IFA38P38286 tF(GAA)QtF(GAA)Q 75 nt1.15□□□□□ -2.23
IFA38P38286 YJL026C-AYJL026C-A 222 nt1.15□□□□□ -2.23
IFA38P38286 ABF2YMR072W 552 nt1.15□□□□□ -2.23
IFA38P38286 KAP120YPL125W 3099 nt1.14□□□□□ -2.23
IFA38P38286 YKU70YMR284W 1809 nt1.13□□□□□ -2.23
IFA38P38286 YIR030W-AYIR030W-A 384 nt1.13□□□□□ -2.23
IFA38P38286 YBR182C-AYBR182C-A 195 nt1.13□□□□□ -2.23
IFA38P38286 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
IFA38P38286 snR74snR74 88 nt1.12□□□□□ -2.23
IFA38P38286 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
IFA38P38286 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
IFA38P38286 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
IFA38P38286 RPL33BYOR234C 324 nt1.11□□□□□ -2.23
IFA38P38286 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
IFA38P38286 YDL196WYDL196W 330 nt1.1□□□□□ -2.23
IFA38P38286 YDR366CYDR366C 399 nt1.1□□□□□ -2.23
IFA38P38286 YKL100W-AYKL100W-A 90 nt1.1□□□□□ -2.23
IFA38P38286 YCR018C-AYCR018C-A 255 nt1.09□□□□□ -2.23
IFA38P38286 TTI1YKL033W 3117 nt1.08□□□□□ -2.24
IFA38P38286 SEC8YPR055W 3198 nt1.07□□□□□ -2.24
IFA38P38286 PMP1YCR024C-A 123 nt1.06□□□□□ -2.24
IFA38P38286 YGL041CYGL041C 204 nt1.06□□□□□ -2.24
IFA38P38286 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
IFA38P38286 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
IFA38P38286 ULI1YFR026C 510 nt1.03□□□□□ -2.24
IFA38P38286 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
IFA38P38286 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
IFA38P38286 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
IFA38P38286 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
IFA38P38286 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
IFA38P38286 BLI1YKL061W 342 nt1.03□□□□□ -2.24
IFA38P38286 snR190snR190 190 nt1.03□□□□□ -2.24
IFA38P38286 BEM2YER155C 6504 nt1.03□□□□□ -2.25
IFA38P38286 YGL123C-AYGL123C-A 231 nt1.02□□□□□ -2.25
IFA38P38286 COX5BYIL111W 456 nt1.02□□□□□ -2.25
IFA38P38286 YLR399W-AYLR399W-A 105 nt1.02□□□□□ -2.25
IFA38P38286 STF2YGR008C 255 nt1.01□□□□□ -2.25
IFA38P38286 YLR282CYLR282C 342 nt1.01□□□□□ -2.25
IFA38P38286 PRP16YKR086W 3216 nt1.01□□□□□ -2.25
IFA38P38286 COY1YKL179C 2040 nt1.01□□□□□ -2.25
IFA38P38286 NPR2YEL062W 1848 nt1.01□□□□□ -2.25
IFA38P38286 BFR2YDR299W 1605 nt1□□□□□ -2.25
IFA38P38286 snR80snR80 171 nt1□□□□□ -2.25
IFA38P38286 YDL185C-AYDL185C-A 228 nt1□□□□□ -2.25
IFA38P38286 YFR012W-AYFR012W-A 87 nt1□□□□□ -2.25
IFA38P38286 YML002WYML002W 2214 nt1□□□□□ -2.25
IFA38P38286 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
IFA38P38286 UBP3YER151C 2739 nt0.99□□□□□ -2.25
IFA38P38286 ASE1YOR058C 2658 nt0.99□□□□□ -2.25
IFA38P38286 COX12YLR038C 252 nt0.99□□□□□ -2.25
IFA38P38286 RPS30BYOR182C 192 nt0.99□□□□□ -2.25
IFA38P38286 YPR160W-AYPR160W-A 81 nt0.97□□□□□ -2.25
IFA38P38286 LTE1YAL024C 4308 nt0.96□□□□□ -2.26
IFA38P38286 HUG1YML058W-A 207 nt0.96□□□□□ -2.26
IFA38P38286 YMR158W-BYMR158W-B 321 nt0.96□□□□□ -2.26
IFA38P38286 SPG3YDR504C 384 nt0.95□□□□□ -2.26
IFA38P38286 YOR302WYOR302W 78 nt0.94□□□□□ -2.26
IFA38P38286 YOR345CYOR345C 351 nt0.94□□□□□ -2.26
IFA38P38286 YIL002W-AYIL002W-A 210 nt0.93□□□□□ -2.26
IFA38P38286 HAL9YOL089C 3093 nt0.93□□□□□ -2.26
IFA38P38286 YMR046W-AYMR046W-A 129 nt0.92□□□□□ -2.26
IFA38P38286 YOR161W-AYOR161W-A 81 nt0.92□□□□□ -2.26
IFA38P38286 PAM16YJL104W 450 nt0.91□□□□□ -2.26
IFA38P38286 UTP8YGR128C 2142 nt0.91□□□□□ -2.26
IFA38P38286 YCR038W-AYCR038W-A 126 nt0.9□□□□□ -2.27
IFA38P38286 tM(CAU)Q1tM(CAU)Q1 76 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms