Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
LDB7P38210 PRP42YDR235W 1635 nt0.17□□□□□ -2.38
LDB7P38210 YFR012W-AYFR012W-A 87 nt0.17□□□□□ -2.38
LDB7P38210 PCC1YKR095W-A 267 nt0.17□□□□□ -2.38
LDB7P38210 YNL211CYNL211C 261 nt0.17□□□□□ -2.38
LDB7P38210 YDR426CYDR426C 378 nt0.16□□□□□ -2.38
LDB7P38210 snR41snR41 95 nt0.16□□□□□ -2.38
LDB7P38210 YDL158CYDL158C 309 nt0.15□□□□□ -2.39
LDB7P38210 YOR011W-AYOR011W-A 207 nt0.15□□□□□ -2.39
LDB7P38210 YER078W-AYER078W-A 165 nt0.13□□□□□ -2.39
LDB7P38210 TOM22YNL131W 459 nt0.12□□□□□ -2.39
LDB7P38210 YNL303WYNL303W 348 nt0.12□□□□□ -2.39
LDB7P38210 ESP1YGR098C 4893 nt0.11□□□□□ -2.39
LDB7P38210 STE5YDR103W 2754 nt0.11□□□□□ -2.39
LDB7P38210 YPL068CYPL068C 882 nt0.1□□□□□ -2.39
LDB7P38210 YPL225WYPL225W 441 nt0.09□□□□□ -2.4
LDB7P38210 snR190snR190 190 nt0.08□□□□□ -2.4
LDB7P38210 TAR1YLR154W-C 375 nt0.07□□□□□ -2.4
LDB7P38210 YLR334CYLR334C 381 nt0.07□□□□□ -2.4
LDB7P38210 YMR307C-AYMR307C-A 195 nt0.07□□□□□ -2.4
LDB7P38210 RPS25BYLR333C 327 nt0.06□□□□□ -2.4
LDB7P38210 SGF11YPL047W 300 nt0.06□□□□□ -2.4
LDB7P38210 COX12YLR038C 252 nt0.05□□□□□ -2.4
LDB7P38210 YBL100W-BYBL100W-B 5313 nt0.04□□□□□ -2.4
LDB7P38210 YDR371C-AYDR371C-A 105 nt0.04□□□□□ -2.4
LDB7P38210 YJL120WYJL120W 324 nt0.04□□□□□ -2.4
LDB7P38210 NNF2YGR089W 2811 nt0.04□□□□□ -2.4
LDB7P38210 YCR018C-AYCR018C-A 255 nt0.03□□□□□ -2.4
LDB7P38210 RPS26AYGL189C 360 nt0.03□□□□□ -2.4
LDB7P38210 VPS20YMR077C 666 nt0.03□□□□□ -2.4
LDB7P38210 YOR186C-AYOR186C-A 210 nt0.03□□□□□ -2.4
LDB7P38210 YOR345CYOR345C 351 nt0.03□□□□□ -2.4
LDB7P38210 snR189snR189 189 nt0.03□□□□□ -2.4
LDB7P38210 THO2YNL139C 4794 nt0.03□□□□□ -2.4
LDB7P38210 RCO1YMR075W 2055 nt0.02□□□□□ -2.41
LDB7P38210 ORC3YLL004W 1851 nt0.01□□□□□ -2.41
LDB7P38210 YDL185C-AYDL185C-A 228 nt0.01□□□□□ -2.41
LDB7P38210 YHR007C-AYHR007C-A 216 nt0.01□□□□□ -2.41
LDB7P38210 BUL2YML111W 2763 nt-0□□□□□ -2.41
LDB7P38210 LEE1YPL054W 906 nt-0.01□□□□□ -2.41
LDB7P38210 YNL146WYNL146W 303 nt-0.02□□□□□ -2.41
LDB7P38210 ATP19YOL077W-A 207 nt-0.02□□□□□ -2.41
LDB7P38210 YHR138CYHR138C 345 nt-0.03□□□□□ -2.41
LDB7P38210 NIP1YMR309C 2439 nt-0.03□□□□□ -2.41
LDB7P38210 tN(GUU)QtN(GUU)Q 71 nt-0.04□□□□□ -2.42
LDB7P38210 YAL016C-BYAL016C-B 186 nt-0.04□□□□□ -2.42
LDB7P38210 snR45snR45 172 nt-0.04□□□□□ -2.42
LDB7P38210 COG8YML071C 1824 nt-0.04□□□□□ -2.42
LDB7P38210 YKL063CYKL063C 504 nt-0.05□□□□□ -2.42
LDB7P38210 YLR434CYLR434C 384 nt-0.06□□□□□ -2.42
LDB7P38210 YAR029WYAR029W 225 nt-0.07□□□□□ -2.42
LDB7P38210 YCR022CYCR022C 345 nt-0.08□□□□□ -2.42
LDB7P38210 RPL35AYDL191W 363 nt-0.08□□□□□ -2.42
LDB7P38210 ULI1YFR026C 510 nt-0.09□□□□□ -2.42
LDB7P38210 YJL007CYJL007C 315 nt-0.1□□□□□ -2.43
LDB7P38210 YKL136WYKL136W 399 nt-0.1□□□□□ -2.43
LDB7P38210 YLR406C-AYLR406C-A 150 nt-0.1□□□□□ -2.43
LDB7P38210 YHR131W-AYHR131W-A 246 nt-0.11□□□□□ -2.43
LDB7P38210 YLR282CYLR282C 342 nt-0.11□□□□□ -2.43
LDB7P38210 YKU70YMR284W 1809 nt-0.11□□□□□ -2.43
LDB7P38210 CSN9YDR179C 489 nt-0.12□□□□□ -2.43
LDB7P38210 SSS1YDR086C 243 nt-0.13□□□□□ -2.43
LDB7P38210 YLL006W-AYLL006W-A 177 nt-0.13□□□□□ -2.43
LDB7P38210 YLR202CYLR202C 327 nt-0.14□□□□□ -2.43
LDB7P38210 YDR354C-AYDR354C-A 144 nt-0.16□□□□□ -2.44
LDB7P38210 YPR092WYPR092W 306 nt-0.16□□□□□ -2.44
LDB7P38210 YJL026C-AYJL026C-A 222 nt-0.17□□□□□ -2.44
LDB7P38210 COY1YKL179C 2040 nt-0.17□□□□□ -2.44
LDB7P38210 YLR232WYLR232W 348 nt-0.17□□□□□ -2.44
LDB7P38210 HTB2YBL002W 396 nt-0.17□□□□□ -2.44
LDB7P38210 YAR053WYAR053W 297 nt-0.18□□□□□ -2.44
LDB7P38210 PRM3YPL192C 402 nt-0.19□□□□□ -2.44
LDB7P38210 SOV1YMR066W 2697 nt-0.19□□□□□ -2.44
LDB7P38210 YKL100W-AYKL100W-A 90 nt-0.2□□□□□ -2.44
LDB7P38210 UTP8YGR128C 2142 nt-0.2□□□□□ -2.44
LDB7P38210 YEL020C-BYEL020C-B 198 nt-0.21□□□□□ -2.44
LDB7P38210 BLI1YKL061W 342 nt-0.22□□□□□ -2.44
LDB7P38210 CSE2YNR010W 450 nt-0.22□□□□□ -2.44
LDB7P38210 YPL205CYPL205C 345 nt-0.22□□□□□ -2.44
LDB7P38210 YEL073CYEL073C 324 nt-0.23□□□□□ -2.45
LDB7P38210 RPS27BYHR021C 249 nt-0.23□□□□□ -2.45
LDB7P38210 PRP39YML046W 1890 nt-0.23□□□□□ -2.45
LDB7P38210 YLR041WYLR041W 321 nt-0.24□□□□□ -2.45
LDB7P38210 YOR121CYOR121C 306 nt-0.24□□□□□ -2.45
LDB7P38210 YGL123C-AYGL123C-A 231 nt-0.25□□□□□ -2.45
LDB7P38210 YBR285WYBR285W 435 nt-0.25□□□□□ -2.45
LDB7P38210 SNU13YEL026W 381 nt-0.26□□□□□ -2.45
LDB7P38210 YER137W-AYER137W-A 306 nt-0.27□□□□□ -2.45
LDB7P38210 YOR161W-AYOR161W-A 81 nt-0.27□□□□□ -2.45
LDB7P38210 snR8snR8 190 nt-0.28□□□□□ -2.45
LDB7P38210 YDR366CYDR366C 399 nt-0.28□□□□□ -2.45
LDB7P38210 snR128snR128 126 nt-0.29□□□□□ -2.46
LDB7P38210 YIL115W-AYIL115W-A 372 nt-0.3□□□□□ -2.46
LDB7P38210 YNL324WYNL324W 396 nt-0.3□□□□□ -2.46
LDB7P38210 YER079WYER079W 633 nt-0.31□□□□□ -2.46
LDB7P38210 YFL063WYFL063W 456 nt-0.32□□□□□ -2.46
LDB7P38210 AGA2YGL032C 264 nt-0.33□□□□□ -2.46
LDB7P38210 YMR001C-AYMR001C-A 231 nt-0.33□□□□□ -2.46
LDB7P38210 YBR072C-AYBR072C-A 162 nt-0.33□□□□□ -2.46
LDB7P38210 YDR048CYDR048C 315 nt-0.34□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms