Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 YHR214C-BYHR214C-B 5382 nt1.78□□□□□ -2.13
VBA3P25594 YEL073CYEL073C 324 nt1.76□□□□□ -2.13
VBA3P25594 ROM2YLR371W 4071 nt1.76□□□□□ -2.13
VBA3P25594 BST1YFL025C 3090 nt1.75□□□□□ -2.13
VBA3P25594 YOR019WYOR019W 2193 nt1.75□□□□□ -2.13
VBA3P25594 YDR354C-AYDR354C-A 144 nt1.75□□□□□ -2.13
VBA3P25594 SDH6YDR379C-A 240 nt1.75□□□□□ -2.13
VBA3P25594 COA6YMR244C-A 315 nt1.75□□□□□ -2.13
VBA3P25594 CDC25YLR310C 4770 nt1.74□□□□□ -2.13
VBA3P25594 MDS3YGL197W 4464 nt1.74□□□□□ -2.13
VBA3P25594 ANS1YHR126C 480 nt1.73□□□□□ -2.13
VBA3P25594 APL1YJR005W 2103 nt1.73□□□□□ -2.13
VBA3P25594 YOR093CYOR093C 4947 nt1.73□□□□□ -2.13
VBA3P25594 YAR009CYAR009C 3591 nt1.73□□□□□ -2.13
VBA3P25594 BPH1YCR032W 6504 nt1.73□□□□□ -2.13
VBA3P25594 YGR164WYGR164W 336 nt1.72□□□□□ -2.13
VBA3P25594 YIL134C-AYIL134C-A 204 nt1.72□□□□□ -2.13
VBA3P25594 YJL026C-AYJL026C-A 222 nt1.72□□□□□ -2.13
VBA3P25594 snR14snR14 160 nt1.72□□□□□ -2.13
VBA3P25594 POL5YEL055C 3069 nt1.71□□□□□ -2.14
VBA3P25594 MYO2YOR326W 4725 nt1.71□□□□□ -2.14
VBA3P25594 SWI4YER111C 3282 nt1.71□□□□□ -2.14
VBA3P25594 MON2YNL297C 4911 nt1.7□□□□□ -2.14
VBA3P25594 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
VBA3P25594 YBL053WYBL053W 375 nt1.68□□□□□ -2.14
VBA3P25594 RPS30BYOR182C 192 nt1.68□□□□□ -2.14
VBA3P25594 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
VBA3P25594 PRP42YDR235W 1635 nt1.67□□□□□ -2.14
VBA3P25594 SET3YKR029C 2256 nt1.67□□□□□ -2.14
VBA3P25594 PAA1YDR071C 576 nt1.67□□□□□ -2.14
VBA3P25594 COX12YLR038C 252 nt1.67□□□□□ -2.14
VBA3P25594 IRC20YLR247C 4671 nt1.67□□□□□ -2.14
VBA3P25594 NUP192YJL039C 5052 nt1.66□□□□□ -2.14
VBA3P25594 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
VBA3P25594 YAL067W-AYAL067W-A 228 nt1.66□□□□□ -2.14
VBA3P25594 YPL044CYPL044C 549 nt1.66□□□□□ -2.14
VBA3P25594 EST2YLR318W 2655 nt1.65□□□□□ -2.14
VBA3P25594 STO1YMR125W 2586 nt1.65□□□□□ -2.14
VBA3P25594 TTI1YKL033W 3117 nt1.65□□□□□ -2.14
VBA3P25594 SMC1YFL008W 3678 nt1.65□□□□□ -2.15
VBA3P25594 RSM22YKL155C 1887 nt1.65□□□□□ -2.15
VBA3P25594 MSN5YDR335W 3675 nt1.64□□□□□ -2.15
VBA3P25594 YNL211CYNL211C 261 nt1.64□□□□□ -2.15
VBA3P25594 BRR2YER172C 6492 nt1.64□□□□□ -2.15
VBA3P25594 AZF1YOR113W 2745 nt1.64□□□□□ -2.15
VBA3P25594 APL3YBL037W 3078 nt1.63□□□□□ -2.15
VBA3P25594 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
VBA3P25594 YBR221W-AYBR221W-A 105 nt1.63□□□□□ -2.15
VBA3P25594 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
VBA3P25594 EAF1YDR359C 2949 nt1.62□□□□□ -2.15
VBA3P25594 YCR038W-AYCR038W-A 126 nt1.62□□□□□ -2.15
VBA3P25594 Q0143Q0143 153 nt1.62□□□□□ -2.15
VBA3P25594 YBR200W-AYBR200W-A 165 nt1.61□□□□□ -2.15
VBA3P25594 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
VBA3P25594 SXM1YDR395W 2835 nt1.61□□□□□ -2.15
VBA3P25594 WAR1YML076C 2835 nt1.61□□□□□ -2.15
VBA3P25594 CDC31YOR257W 486 nt1.6□□□□□ -2.15
VBA3P25594 CHS1YNL192W 3396 nt1.59□□□□□ -2.15
VBA3P25594 SNU13YEL026W 381 nt1.59□□□□□ -2.15
VBA3P25594 SEC3YER008C 4011 nt1.59□□□□□ -2.16
VBA3P25594 TRM732YMR259C 4263 nt1.58□□□□□ -2.16
VBA3P25594 YIL020C-AYIL020C-A 339 nt1.58□□□□□ -2.16
VBA3P25594 MEC1YBR136W 7107 nt1.58□□□□□ -2.16
VBA3P25594 YIL002W-AYIL002W-A 210 nt1.57□□□□□ -2.16
VBA3P25594 CMC4YMR194C-B 222 nt1.57□□□□□ -2.16
VBA3P25594 NOP9YJL010C 2001 nt1.57□□□□□ -2.16
VBA3P25594 YKL100W-AYKL100W-A 90 nt1.56□□□□□ -2.16
VBA3P25594 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
VBA3P25594 NUP188YML103C 4968 nt1.54□□□□□ -2.16
VBA3P25594 YLL020CYLL020C 306 nt1.54□□□□□ -2.16
VBA3P25594 NUP157YER105C 4176 nt1.53□□□□□ -2.16
VBA3P25594 YGL123C-AYGL123C-A 231 nt1.53□□□□□ -2.16
VBA3P25594 YOR102WYOR102W 351 nt1.53□□□□□ -2.16
VBA3P25594 PMD1YER132C 5262 nt1.53□□□□□ -2.17
VBA3P25594 YHL015W-AYHL015W-A 84 nt1.52□□□□□ -2.17
VBA3P25594 YER053C-AYER053C-A 114 nt1.51□□□□□ -2.17
VBA3P25594 COX5BYIL111W 456 nt1.51□□□□□ -2.17
VBA3P25594 RPL26BYGR034W 384 nt1.5□□□□□ -2.17
VBA3P25594 snR48snR48 113 nt1.5□□□□□ -2.17
VBA3P25594 PRP5YBR237W 2550 nt1.5□□□□□ -2.17
VBA3P25594 YFR012W-AYFR012W-A 87 nt1.48□□□□□ -2.17
VBA3P25594 YOR161W-AYOR161W-A 81 nt1.48□□□□□ -2.17
VBA3P25594 MSH3YCR092C 3057 nt1.47□□□□□ -2.17
VBA3P25594 YLR282CYLR282C 342 nt1.47□□□□□ -2.17
VBA3P25594 YOR314W-AYOR314W-A 111 nt1.47□□□□□ -2.17
VBA3P25594 BFR2YDR299W 1605 nt1.47□□□□□ -2.17
VBA3P25594 STB6YKL072W 2301 nt1.46□□□□□ -2.18
VBA3P25594 YNL205CYNL205C 423 nt1.46□□□□□ -2.18
VBA3P25594 tL(UAA)QtL(UAA)Q 85 nt1.45□□□□□ -2.18
VBA3P25594 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
VBA3P25594 KAP120YPL125W 3099 nt1.45□□□□□ -2.18
VBA3P25594 YML002WYML002W 2214 nt1.44□□□□□ -2.18
VBA3P25594 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
VBA3P25594 snR85snR85 171 nt1.43□□□□□ -2.18
VBA3P25594 YGL182CYGL182C 324 nt1.43□□□□□ -2.18
VBA3P25594 ASE1YOR058C 2658 nt1.43□□□□□ -2.18
VBA3P25594 UTP8YGR128C 2142 nt1.43□□□□□ -2.18
VBA3P25594 snR190snR190 190 nt1.42□□□□□ -2.18
VBA3P25594 FIG2YCR089W 4830 nt1.41□□□□□ -2.18
VBA3P25594 GEA2YEL022W 4380 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 107.5 ms