Protein–RNA interactions for Protein: P23615

SPT6, Transcription elongation factor SPT6, yeastyeast

Known RBP Predictions only

Length 1,451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT6P23615 YDL185C-AYDL185C-A 228 nt-2.66□□□□□ -2.84
SPT6P23615 YNL162W-AYNL162W-A 219 nt-2.66□□□□□ -2.84
SPT6P23615 DCP1YOL149W 696 nt-2.67□□□□□ -2.84
SPT6P23615 Q0142Q0142 177 nt-2.68□□□□□ -2.84
SPT6P23615 SDH7YDR511W 402 nt-2.71□□□□□ -2.84
SPT6P23615 VAM3YOR106W 852 nt-2.71□□□□□ -2.84
SPT6P23615 AGA2YGL032C 264 nt-2.72□□□□□ -2.85
SPT6P23615 YIL002W-AYIL002W-A 210 nt-2.73□□□□□ -2.85
SPT6P23615 YCR018C-AYCR018C-A 255 nt-2.74□□□□□ -2.85
SPT6P23615 YHR130CYHR130C 336 nt-2.74□□□□□ -2.85
SPT6P23615 tT(UGU)Q1tT(UGU)Q1 76 nt-2.75□□□□□ -2.85
SPT6P23615 YOR170WYOR170W 306 nt-2.77□□□□□ -2.85
SPT6P23615 snR49snR49 165 nt-2.77□□□□□ -2.85
SPT6P23615 YJR140W-AYJR140W-A 150 nt-2.77□□□□□ -2.85
SPT6P23615 LOC1YFR001W 615 nt-2.78□□□□□ -2.86
SPT6P23615 EAF6YJR082C 342 nt-2.78□□□□□ -2.86
SPT6P23615 PET20YPL159C 762 nt-2.78□□□□□ -2.86
SPT6P23615 COX7YMR256C 183 nt-2.79□□□□□ -2.86
SPT6P23615 THG1YGR024C 714 nt-2.81□□□□□ -2.86
SPT6P23615 snR189snR189 189 nt-2.82□□□□□ -2.86
SPT6P23615 SPC24YMR117C 642 nt-2.83□□□□□ -2.86
SPT6P23615 snR24snR24 89 nt-2.83□□□□□ -2.86
SPT6P23615 BER1YLR412W 825 nt-2.84□□□□□ -2.86
SPT6P23615 YOR366WYOR366W 354 nt-2.84□□□□□ -2.86
SPT6P23615 snR5snR5 204 nt-2.85□□□□□ -2.87
SPT6P23615 YDR290WYDR290W 330 nt-2.85□□□□□ -2.87
SPT6P23615 YGR228WYGR228W 345 nt-2.86□□□□□ -2.87
SPT6P23615 YBR072C-AYBR072C-A 162 nt-2.86□□□□□ -2.87
SPT6P23615 YPR092WYPR092W 306 nt-2.86□□□□□ -2.87
SPT6P23615 VPS63YLR261C 327 nt-2.91□□□□□ -2.88
SPT6P23615 YPR016W-AYPR016W-A 261 nt-2.91□□□□□ -2.88
SPT6P23615 CBS1YDL069C 690 nt-2.93□□□□□ -2.88
SPT6P23615 DFG10YIL049W 762 nt-2.94□□□□□ -2.88
SPT6P23615 YER135CYER135C 393 nt-2.96□□□□□ -2.88
SPT6P23615 ACF4YJR083C 930 nt-2.96□□□□□ -2.88
SPT6P23615 RUF20RUF20 443 nt-2.96□□□□□ -2.88
SPT6P23615 YLR264C-AYLR264C-A 117 nt-2.97□□□□□ -2.89
SPT6P23615 SRB7YDR308C 423 nt-3□□□□□ -2.89
SPT6P23615 YBL107W-AYBL107W-A 105 nt-3.01□□□□□ -2.89
SPT6P23615 YGL015CYGL015C 393 nt-3.03□□□□□ -2.89
SPT6P23615 SCEIQ0160 708 nt-3.03□□□□□ -2.89
SPT6P23615 YOR293C-AYOR293C-A 150 nt-3.03□□□□□ -2.89
SPT6P23615 CWC23YGL128C 852 nt-3.03□□□□□ -2.9
SPT6P23615 YKL063CYKL063C 504 nt-3.03□□□□□ -2.9
SPT6P23615 YOR011W-AYOR011W-A 207 nt-3.03□□□□□ -2.9
SPT6P23615 snR72snR72 98 nt-3.04□□□□□ -2.9
SPT6P23615 snR74snR74 88 nt-3.04□□□□□ -2.9
SPT6P23615 YKL202WYKL202W 582 nt-3.04□□□□□ -2.9
SPT6P23615 IRC16YPR038W 360 nt-3.05□□□□□ -2.9
SPT6P23615 YOL106WYOL106W 354 nt-3.07□□□□□ -2.9
SPT6P23615 CUP1-1YHR053C 186 nt-3.08□□□□□ -2.9
SPT6P23615 CUP1-2YHR055C 186 nt-3.08□□□□□ -2.9
SPT6P23615 LSM4YER112W 564 nt-3.09□□□□□ -2.9
SPT6P23615 CDC65tQ(CUG)M 72 nt-3.09□□□□□ -2.9
SPT6P23615 SGF11YPL047W 300 nt-3.09□□□□□ -2.9
SPT6P23615 YOR192C-CYOR192C-C 237 nt-3.1□□□□□ -2.91
SPT6P23615 RPL22BYFL034C-A 369 nt-3.13□□□□□ -2.91
SPT6P23615 snR81snR81 201 nt-3.14□□□□□ -2.91
SPT6P23615 YGL052WYGL052W 306 nt-3.14□□□□□ -2.91
SPT6P23615 YDR366CYDR366C 399 nt-3.16□□□□□ -2.91
SPT6P23615 MND1YGL183C 660 nt-3.16□□□□□ -2.92
SPT6P23615 snR59snR59 78 nt-3.19□□□□□ -2.92
SPT6P23615 YER188C-AYER188C-A 300 nt-3.2□□□□□ -2.92
SPT6P23615 YPR010C-AYPR010C-A 219 nt-3.2□□□□□ -2.92
SPT6P23615 YGL239CYGL239C 315 nt-3.22□□□□□ -2.93
SPT6P23615 snR51snR51 107 nt-3.22□□□□□ -2.93
SPT6P23615 YIR021W-AYIR021W-A 213 nt-3.24□□□□□ -2.93
SPT6P23615 YMR304C-AYMR304C-A 351 nt-3.24□□□□□ -2.93
SPT6P23615 YOR364WYOR364W 369 nt-3.24□□□□□ -2.93
SPT6P23615 POP7YBR167C 423 nt-3.27□□□□□ -2.93
SPT6P23615 JLP2YMR132C 627 nt-3.28□□□□□ -2.93
SPT6P23615 YHR125WYHR125W 306 nt-3.29□□□□□ -2.94
SPT6P23615 YNL058CYNL058C 951 nt-3.3□□□□□ -2.94
SPT6P23615 YPT6YLR262C 648 nt-3.31□□□□□ -2.94
SPT6P23615 ZEO1YOL109W 342 nt-3.31□□□□□ -2.94
SPT6P23615 HMLALPHA2YCL067C 633 nt-3.32□□□□□ -2.94
SPT6P23615 MATALPHA2YCR039C 633 nt-3.32□□□□□ -2.94
SPT6P23615 HMRA2YCR096C 360 nt-3.32□□□□□ -2.94
SPT6P23615 snR77snR77 88 nt-3.32□□□□□ -2.94
SPT6P23615 YER053C-AYER053C-A 114 nt-3.33□□□□□ -2.94
SPT6P23615 snR39BsnR39B 96 nt-3.33□□□□□ -2.94
SPT6P23615 YKL044WYKL044W 321 nt-3.34□□□□□ -2.94
SPT6P23615 YPL229WYPL229W 621 nt-3.34□□□□□ -2.94
SPT6P23615 SDH6YDR379C-A 240 nt-3.36□□□□□ -2.95
SPT6P23615 ILM1YJR118C 612 nt-3.36□□□□□ -2.95
SPT6P23615 FYV7YLR068W 456 nt-3.37□□□□□ -2.95
SPT6P23615 AIM29YKR074W 468 nt-3.39□□□□□ -2.95
SPT6P23615 YGR240C-AYGR240C-A 201 nt-3.41□□□□□ -2.96
SPT6P23615 YBR285WYBR285W 435 nt-3.41□□□□□ -2.96
SPT6P23615 YFR009W-AYFR009W-A 258 nt-3.44□□□□□ -2.96
SPT6P23615 YKL100W-AYKL100W-A 90 nt-3.44□□□□□ -2.96
SPT6P23615 YMR315W-AYMR315W-A 108 nt-3.44□□□□□ -2.96
SPT6P23615 YNL171CYNL171C 369 nt-3.46□□□□□ -2.96
SPT6P23615 RPS27BYHR021C 249 nt-3.47□□□□□ -2.96
SPT6P23615 YNL205CYNL205C 423 nt-3.47□□□□□ -2.96
SPT6P23615 YAR029WYAR029W 225 nt-3.51□□□□□ -2.97
SPT6P23615 YGR025WYGR025W 303 nt-3.54□□□□□ -2.98
SPT6P23615 YNL146C-AYNL146C-A 195 nt-3.54□□□□□ -2.98
SPT6P23615 YCR001WYCR001W 315 nt-3.55□□□□□ -2.98
SPT6P23615 YGL230CYGL230C 444 nt-3.55□□□□□ -2.98
Retrieved 100 of 7,029 protein–RNA pairs in 42.4 ms