Protein–RNA interactions for Protein: P22336

RFA1, Replication factor A protein 1, yeastyeast

Known RBP Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFA1P22336 YCR038W-AYCR038W-A 126 nt1.84□□□□□ -2.11
RFA1P22336 YIL002W-AYIL002W-A 210 nt1.84□□□□□ -2.11
RFA1P22336 UFD2YDL190C 2886 nt1.84□□□□□ -2.12
RFA1P22336 MYO4YAL029C 4416 nt1.83□□□□□ -2.12
RFA1P22336 YER172C-AYER172C-A 381 nt1.83□□□□□ -2.12
RFA1P22336 snR48snR48 113 nt1.83□□□□□ -2.12
RFA1P22336 RAD50YNL250W 3939 nt1.83□□□□□ -2.12
RFA1P22336 NEO1YIL048W 3456 nt1.82□□□□□ -2.12
RFA1P22336 LHS1YKL073W 2646 nt1.82□□□□□ -2.12
RFA1P22336 YOR102WYOR102W 351 nt1.82□□□□□ -2.12
RFA1P22336 KAP122YGL016W 3246 nt1.82□□□□□ -2.12
RFA1P22336 YMR045CYMR045C 5268 nt1.82□□□□□ -2.12
RFA1P22336 KIP1YBL063W 3336 nt1.81□□□□□ -2.12
RFA1P22336 MMS4YBR098W 2076 nt1.81□□□□□ -2.12
RFA1P22336 FAB1YFR019W 6837 nt1.81□□□□□ -2.12
RFA1P22336 YJL022WYJL022W 309 nt1.8□□□□□ -2.12
RFA1P22336 YNL211CYNL211C 261 nt1.8□□□□□ -2.12
RFA1P22336 SLX4YLR135W 2247 nt1.79□□□□□ -2.12
RFA1P22336 YHL015W-AYHL015W-A 84 nt1.79□□□□□ -2.12
RFA1P22336 YAR009CYAR009C 3591 nt1.78□□□□□ -2.12
RFA1P22336 TRM732YMR259C 4263 nt1.78□□□□□ -2.12
RFA1P22336 YFR012W-AYFR012W-A 87 nt1.78□□□□□ -2.12
RFA1P22336 TMA7YLR262C-A 195 nt1.77□□□□□ -2.13
RFA1P22336 COA6YMR244C-A 315 nt1.77□□□□□ -2.13
RFA1P22336 snR14snR14 160 nt1.77□□□□□ -2.13
RFA1P22336 YOR314W-AYOR314W-A 111 nt1.76□□□□□ -2.13
RFA1P22336 CDC31YOR257W 486 nt1.75□□□□□ -2.13
RFA1P22336 PRP5YBR237W 2550 nt1.74□□□□□ -2.13
RFA1P22336 MON2YNL297C 4911 nt1.74□□□□□ -2.13
RFA1P22336 YPP1YGR198W 2454 nt1.74□□□□□ -2.13
RFA1P22336 YER053C-AYER053C-A 114 nt1.74□□□□□ -2.13
RFA1P22336 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
RFA1P22336 EAF1YDR359C 2949 nt1.73□□□□□ -2.13
RFA1P22336 YGL123C-AYGL123C-A 231 nt1.73□□□□□ -2.13
RFA1P22336 RSM22YKL155C 1887 nt1.72□□□□□ -2.13
RFA1P22336 tL(UAA)QtL(UAA)Q 85 nt1.72□□□□□ -2.13
RFA1P22336 BFR2YDR299W 1605 nt1.72□□□□□ -2.13
RFA1P22336 YLL054CYLL054C 2532 nt1.72□□□□□ -2.13
RFA1P22336 IRC20YLR247C 4671 nt1.71□□□□□ -2.14
RFA1P22336 GYP5YPL249C 2685 nt1.71□□□□□ -2.14
RFA1P22336 SET3YKR029C 2256 nt1.7□□□□□ -2.14
RFA1P22336 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
RFA1P22336 COX5BYIL111W 456 nt1.7□□□□□ -2.14
RFA1P22336 YOR161W-AYOR161W-A 81 nt1.69□□□□□ -2.14
RFA1P22336 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
RFA1P22336 SEC3YER008C 4011 nt1.68□□□□□ -2.14
RFA1P22336 SWI4YER111C 3282 nt1.68□□□□□ -2.14
RFA1P22336 YGL182CYGL182C 324 nt1.68□□□□□ -2.14
RFA1P22336 YKL100W-AYKL100W-A 90 nt1.68□□□□□ -2.14
RFA1P22336 YLL020CYLL020C 306 nt1.68□□□□□ -2.14
RFA1P22336 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
RFA1P22336 YCL001W-BYCL001W-B 255 nt1.68□□□□□ -2.14
RFA1P22336 YOR019WYOR019W 2193 nt1.68□□□□□ -2.14
RFA1P22336 CDC25YLR310C 4770 nt1.67□□□□□ -2.14
RFA1P22336 REV3YPL167C 4515 nt1.67□□□□□ -2.14
RFA1P22336 APL3YBL037W 3078 nt1.67□□□□□ -2.14
RFA1P22336 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
RFA1P22336 STO1YMR125W 2586 nt1.66□□□□□ -2.14
RFA1P22336 NOP9YJL010C 2001 nt1.66□□□□□ -2.14
RFA1P22336 STB6YKL072W 2301 nt1.66□□□□□ -2.14
RFA1P22336 CMC4YMR194C-B 222 nt1.66□□□□□ -2.14
RFA1P22336 ASE1YOR058C 2658 nt1.66□□□□□ -2.14
RFA1P22336 PEP1YBL017C 4740 nt1.65□□□□□ -2.14
RFA1P22336 ROM2YLR371W 4071 nt1.65□□□□□ -2.14
RFA1P22336 FIG2YCR089W 4830 nt1.65□□□□□ -2.15
RFA1P22336 YLR282CYLR282C 342 nt1.65□□□□□ -2.15
RFA1P22336 VPS15YBR097W 4365 nt1.65□□□□□ -2.15
RFA1P22336 BPH1YCR032W 6504 nt1.64□□□□□ -2.15
RFA1P22336 YLR041WYLR041W 321 nt1.64□□□□□ -2.15
RFA1P22336 YBL039C-AYBL039C-A 84 nt1.63□□□□□ -2.15
RFA1P22336 BST1YFL025C 3090 nt1.61□□□□□ -2.15
RFA1P22336 RTP1YMR185W 2946 nt1.61□□□□□ -2.15
RFA1P22336 CHS6YJL099W 2241 nt1.61□□□□□ -2.15
RFA1P22336 MEC1YBR136W 7107 nt1.61□□□□□ -2.15
RFA1P22336 CLU1YMR012W 3834 nt1.6□□□□□ -2.15
RFA1P22336 UTP8YGR128C 2142 nt1.6□□□□□ -2.15
RFA1P22336 YML002WYML002W 2214 nt1.59□□□□□ -2.15
RFA1P22336 NUP145YGL092W 3954 nt1.59□□□□□ -2.15
RFA1P22336 WAR1YML076C 2835 nt1.59□□□□□ -2.16
RFA1P22336 YOR093CYOR093C 4947 nt1.59□□□□□ -2.16
RFA1P22336 CHS1YNL192W 3396 nt1.59□□□□□ -2.16
RFA1P22336 RPM2YML091C 3609 nt1.58□□□□□ -2.16
RFA1P22336 RAD9YDR217C 3930 nt1.58□□□□□ -2.16
RFA1P22336 OST4YDL232W 111 nt1.58□□□□□ -2.16
RFA1P22336 YOR329W-AYOR329W-A 210 nt1.58□□□□□ -2.16
RFA1P22336 PMD1YER132C 5262 nt1.58□□□□□ -2.16
RFA1P22336 CDC39YCR093W 6327 nt1.57□□□□□ -2.16
RFA1P22336 NUP157YER105C 4176 nt1.57□□□□□ -2.16
RFA1P22336 NUP188YML103C 4968 nt1.57□□□□□ -2.16
RFA1P22336 TAH1YCR060W 336 nt1.56□□□□□ -2.16
RFA1P22336 RPL26BYGR034W 384 nt1.56□□□□□ -2.16
RFA1P22336 YIL071W-AYIL071W-A 477 nt1.56□□□□□ -2.16
RFA1P22336 KAP120YPL125W 3099 nt1.56□□□□□ -2.16
RFA1P22336 EST2YLR318W 2655 nt1.56□□□□□ -2.16
RFA1P22336 CFT1YDR301W 4074 nt1.55□□□□□ -2.16
RFA1P22336 YMR272W-BYMR272W-B 108 nt1.55□□□□□ -2.16
RFA1P22336 snR190snR190 190 nt1.55□□□□□ -2.16
RFA1P22336 YBR200W-AYBR200W-A 165 nt1.55□□□□□ -2.16
RFA1P22336 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
RFA1P22336 SMC1YFL008W 3678 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 74.8 ms