Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	PDR8	YLR266C	2106 nt		2.32	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	CHC1	YGL206C	4962 nt		2.31	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	CDC60	YPL160W	3273 nt		2.31	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	snR62	snR62	100 nt		2.3	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	YGL123C-A	YGL123C-A	231 nt		2.3	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	YAL037C-A	YAL037C-A	93 nt		2.3	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	BFR2	YDR299W	1605 nt		2.3	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	YDL206W	YDL206W	2289 nt		2.29	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	RPL37B	YDR500C	267 nt		2.29	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	PET309	YLR067C	2898 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	SCD5	YOR329C	2619 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	MGA2	YIR033W	3342 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	tM(CAU)Q2	tM(CAU)Q2	78 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	SAC3	YDR159W	3906 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	SEC16	YPL085W	6588 nt		2.28	□□□□□ -2.04
TY4B-P	A0A0B7P3V8	UFD2	YDL190C	2886 nt		2.28	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	REV3	YPL167C	4515 nt		2.27	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	MSB1	YOR188W	3414 nt		2.27	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	CTR9	YOL145C	3234 nt		2.27	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	NEO1	YIL048W	3456 nt		2.27	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	ADR1	YDR216W	3972 nt		2.26	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	TMA7	YLR262C-A	195 nt		2.26	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	UBP2	YOR124C	3819 nt		2.25	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	TAH1	YCR060W	336 nt		2.25	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	YOR161W-A	YOR161W-A	81 nt		2.25	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	HER1	YOR227W	3741 nt		2.25	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	IRE1	YHR079C	3348 nt		2.24	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	SYH1	YPL105C	2550 nt		2.23	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	YKL100W-A	YKL100W-A	90 nt		2.23	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	SLN1	YIL147C	3663 nt		2.22	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	SPP41	YDR464W	4308 nt		2.22	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	EAF1	YDR359C	2949 nt		2.22	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	HSL1	YKL101W	4557 nt		2.22	□□□□□ -2.05
TY4B-P	A0A0B7P3V8	TOR2	YKL203C	7425 nt		2.21	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YER172C-A	YER172C-A	381 nt		2.21	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	FRK1	YPL141C	2598 nt		2.2	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	COX5B	YIL111W	456 nt		2.2	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	SSD1	YDR293C	3753 nt		2.2	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	NUP157	YER105C	4176 nt		2.19	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YBR072C-A	YBR072C-A	162 nt		2.19	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	RSM22	YKL155C	1887 nt		2.19	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YMR045C	YMR045C	5268 nt		2.19	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	COG6	YNL041C	2520 nt		2.18	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YNL266W	YNL266W	420 nt		2.18	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	TBS1	YBR150C	3285 nt		2.17	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YOL083C-A	YOL083C-A	141 nt		2.17	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	GCN2	YDR283C	4980 nt		2.17	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	POL5	YEL055C	3069 nt		2.16	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	KAP120	YPL125W	3099 nt		2.16	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YDR210W	YDR210W	228 nt		2.16	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	YJL127W-A	YJL127W-A	117 nt		2.16	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	BIR1	YJR089W	2865 nt		2.16	□□□□□ -2.06
TY4B-P	A0A0B7P3V8	TFC3	YAL001C	3483 nt		2.15	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SPO24	YPR036W-A	204 nt		2.15	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SEY1	YOR165W	2331 nt		2.15	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SEC31	YDL195W	3822 nt		2.15	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	HIR3	YJR140C	4947 nt		2.14	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	COA6	YMR244C-A	315 nt		2.14	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	UBR2	YLR024C	5619 nt		2.14	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SLX4	YLR135W	2247 nt		2.14	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	KOG1	YHR186C	4674 nt		2.14	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YHR214C-B	YHR214C-B	5382 nt		2.13	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SFB2	YNL049C	2631 nt		2.12	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YML002W	YML002W	2214 nt		2.11	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YJR039W	YJR039W	3366 nt		2.11	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SEC1	YDR164C	2175 nt		2.11	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YJL052C-A	YJL052C-A	120 nt		2.11	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YBL071C-B	YBL071C-B	99 nt		2.1	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	SEC21	YNL287W	2808 nt		2.1	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	RTP1	YMR185W	2946 nt		2.1	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	YDR034C-A	YDR034C-A	177 nt		2.09	□□□□□ -2.07
TY4B-P	A0A0B7P3V8	TRM3	YDL112W	4311 nt		2.09	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	SMC1	YFL008W	3678 nt		2.08	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	MSH6	YDR097C	3729 nt		2.08	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	BPH1	YCR032W	6504 nt		2.08	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	PKH3	YDR466W	2697 nt		2.08	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	UFD4	YKL010C	4452 nt		2.08	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	UTP22	YGR090W	3714 nt		2.07	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	TDA9	YML081W	3756 nt		2.07	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	YLR232W	YLR232W	348 nt		2.07	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	BRE1	YDL074C	2103 nt		2.06	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	UTP21	YLR409C	2820 nt		2.06	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	YGR146C-A	YGR146C-A	162 nt		2.06	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	tT(UGU)H	tT(UGU)H	72 nt		2.05	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	NUT1	YGL151W	3399 nt		2.05	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	RAD50	YNL250W	3939 nt		2.05	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	GYP5	YPL249C	2685 nt		2.04	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	MYO4	YAL029C	4416 nt		2.04	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	YLR041W	YLR041W	321 nt		2.04	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	DGR1	YNL130C-A	147 nt		2.04	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	MMS4	YBR098W	2076 nt		2.03	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	FYV10	YIL097W	1551 nt		2.03	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	YBL100W-C	YBL100W-C	120 nt		2.03	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	PAN2	YGL094C	3348 nt		2.03	□□□□□ -2.08
TY4B-P	A0A0B7P3V8	YAR009C	YAR009C	3591 nt		2.02	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	ALY2	YJL084C	3141 nt		2.02	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	YMR247W-A	YMR247W-A	144 nt		2.01	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	FKS1	YLR342W	5631 nt		1.99	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	YBR196C-A	YBR196C-A	150 nt		1.99	□□□□□ -2.09
TY4B-P	A0A0B7P3V8	SET3	YKR029C	2256 nt		1.98	□□□□□ -2.09

Retrieved 100 of 7,029 protein–RNA pairs in 116 ms