Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 EDA-201ENST00000338901 1233 ntBASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM56-RWDD3S4R434 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 AC091799.1-201ENST00000422823 811 ntBASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM56-RWDD3S4R434 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 AC007322.3-201ENST00000426526 701 ntBASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC7A5P2-201ENST00000553010 536 ntBASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 AC243732.1-201ENST00000612648 864 ntBASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 AC009237.14-201ENST00000609975 1594 ntBASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM56-RWDD3S4R434 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 MIR939-201ENST00000401314 82 ntBASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TMEM56-RWDD3S4R434 PBX2P1-201ENST00000493219 1291 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms