Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 RPS25BYLR333C 327 nt1.82□□□□□ -2.12
HRD3Q05787 ENV11YGR071C 2583 nt1.82□□□□□ -2.12
HRD3Q05787 DGR2YKL121W 2559 nt1.81□□□□□ -2.12
HRD3Q05787 TRS65YGR166W 1683 nt1.81□□□□□ -2.12
HRD3Q05787 APL2YKL135C 2181 nt1.81□□□□□ -2.12
HRD3Q05787 YDR182W-AYDR182W-A 204 nt1.81□□□□□ -2.12
HRD3Q05787 YGL217CYGL217C 342 nt1.81□□□□□ -2.12
HRD3Q05787 YLR140WYLR140W 327 nt1.81□□□□□ -2.12
HRD3Q05787 MSH6YDR097C 3729 nt1.81□□□□□ -2.12
HRD3Q05787 GCN2YDR283C 4980 nt1.8□□□□□ -2.12
HRD3Q05787 YLR342W-AYLR342W-A 174 nt1.8□□□□□ -2.12
HRD3Q05787 YBR131C-AYBR131C-A 90 nt1.8□□□□□ -2.12
HRD3Q05787 MYO4YAL029C 4416 nt1.8□□□□□ -2.12
HRD3Q05787 NOC3YLR002C 1992 nt1.79□□□□□ -2.12
HRD3Q05787 Q0092Q0092 141 nt1.79□□□□□ -2.12
HRD3Q05787 ULI1YFR026C 510 nt1.79□□□□□ -2.12
HRD3Q05787 ANS1YHR126C 480 nt1.79□□□□□ -2.12
HRD3Q05787 YJL120WYJL120W 324 nt1.79□□□□□ -2.12
HRD3Q05787 SEY1YOR165W 2331 nt1.78□□□□□ -2.12
HRD3Q05787 YLL007CYLL007C 1998 nt1.78□□□□□ -2.12
HRD3Q05787 PIG1YLR273C 1947 nt1.78□□□□□ -2.12
HRD3Q05787 HSL1YKL101W 4557 nt1.78□□□□□ -2.12
HRD3Q05787 ECM12YHR021W-A 456 nt1.78□□□□□ -2.12
HRD3Q05787 YNL097C-BYNL097C-B 123 nt1.78□□□□□ -2.12
HRD3Q05787 YOR072W-BYOR072W-B 162 nt1.78□□□□□ -2.12
HRD3Q05787 YBR174CYBR174C 315 nt1.78□□□□□ -2.12
HRD3Q05787 HIR3YJR140C 4947 nt1.78□□□□□ -2.13
HRD3Q05787 CFT1YDR301W 4074 nt1.77□□□□□ -2.13
HRD3Q05787 RPL31AYDL075W 342 nt1.77□□□□□ -2.13
HRD3Q05787 SEC63YOR254C 1992 nt1.77□□□□□ -2.13
HRD3Q05787 PRP39YML046W 1890 nt1.77□□□□□ -2.13
HRD3Q05787 MGA2YIR033W 3342 nt1.76□□□□□ -2.13
HRD3Q05787 YIR044CYIR044C 186 nt1.76□□□□□ -2.13
HRD3Q05787 TMA7YLR262C-A 195 nt1.76□□□□□ -2.13
HRD3Q05787 YBL008W-AYBL008W-A 240 nt1.76□□□□□ -2.13
HRD3Q05787 CUL3YGR003W 2235 nt1.76□□□□□ -2.13
HRD3Q05787 TRM3YDL112W 4311 nt1.76□□□□□ -2.13
HRD3Q05787 PMD1YER132C 5262 nt1.75□□□□□ -2.13
HRD3Q05787 COF1YLL050C 432 nt1.75□□□□□ -2.13
HRD3Q05787 YNL144CYNL144C 2223 nt1.74□□□□□ -2.13
HRD3Q05787 snR52snR52 92 nt1.74□□□□□ -2.13
HRD3Q05787 PTP2YOR208W 2253 nt1.74□□□□□ -2.13
HRD3Q05787 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
HRD3Q05787 PAU3YCR104W 375 nt1.73□□□□□ -2.13
HRD3Q05787 COA6YMR244C-A 315 nt1.73□□□□□ -2.13
HRD3Q05787 ATG9YDL149W 2994 nt1.72□□□□□ -2.13
HRD3Q05787 YMR175W-AYMR175W-A 195 nt1.72□□□□□ -2.13
HRD3Q05787 YOR345CYOR345C 351 nt1.72□□□□□ -2.13
HRD3Q05787 SFB2YNL049C 2631 nt1.72□□□□□ -2.13
HRD3Q05787 PDR8YLR266C 2106 nt1.72□□□□□ -2.13
HRD3Q05787 YDL007C-AYDL007C-A 258 nt1.71□□□□□ -2.14
HRD3Q05787 YLL019W-AYLL019W-A 93 nt1.71□□□□□ -2.14
HRD3Q05787 PIP2YOR363C 2991 nt1.71□□□□□ -2.14
HRD3Q05787 snR46snR46 197 nt1.71□□□□□ -2.14
HRD3Q05787 UTP21YLR409C 2820 nt1.71□□□□□ -2.14
HRD3Q05787 AHC1YOR023C 1701 nt1.7□□□□□ -2.14
HRD3Q05787 ALK1YGL021W 2283 nt1.69□□□□□ -2.14
HRD3Q05787 AIM44YPL158C 2277 nt1.69□□□□□ -2.14
HRD3Q05787 PKH2YOL100W 3246 nt1.69□□□□□ -2.14
HRD3Q05787 LHS1YKL073W 2646 nt1.69□□□□□ -2.14
HRD3Q05787 PBY1YBR094W 2262 nt1.69□□□□□ -2.14
HRD3Q05787 SLI15YBR156C 2097 nt1.68□□□□□ -2.14
HRD3Q05787 LRE1YCL051W 1752 nt1.68□□□□□ -2.14
HRD3Q05787 YDL196WYDL196W 330 nt1.68□□□□□ -2.14
HRD3Q05787 COG4YPR105C 2586 nt1.68□□□□□ -2.14
HRD3Q05787 NUP192YJL039C 5052 nt1.67□□□□□ -2.14
HRD3Q05787 FIG4YNL325C 2640 nt1.66□□□□□ -2.14
HRD3Q05787 ATP8Q0080 147 nt1.66□□□□□ -2.14
HRD3Q05787 NCA2YPR155C 1851 nt1.66□□□□□ -2.14
HRD3Q05787 SLD3YGL113W 2007 nt1.66□□□□□ -2.14
HRD3Q05787 TDA9YML081W 3756 nt1.65□□□□□ -2.14
HRD3Q05787 YJR039WYJR039W 3366 nt1.65□□□□□ -2.14
HRD3Q05787 SBE22YHR103W 2559 nt1.65□□□□□ -2.14
HRD3Q05787 YDR521WYDR521W 336 nt1.65□□□□□ -2.15
HRD3Q05787 SPO24YPR036W-A 204 nt1.65□□□□□ -2.15
HRD3Q05787 YHR210CYHR210C 1026 nt1.64□□□□□ -2.15
HRD3Q05787 YMR247W-AYMR247W-A 144 nt1.64□□□□□ -2.15
HRD3Q05787 YOR170WYOR170W 306 nt1.64□□□□□ -2.15
HRD3Q05787 RPL33BYOR234C 324 nt1.64□□□□□ -2.15
HRD3Q05787 BRR2YER172C 6492 nt1.64□□□□□ -2.15
HRD3Q05787 RAD50YNL250W 3939 nt1.63□□□□□ -2.15
HRD3Q05787 YBR206WYBR206W 324 nt1.63□□□□□ -2.15
HRD3Q05787 YGR109W-BYGR109W-B 4644 nt1.62□□□□□ -2.15
HRD3Q05787 CAT8YMR280C 4302 nt1.62□□□□□ -2.15
HRD3Q05787 PMP1YCR024C-A 123 nt1.61□□□□□ -2.15
HRD3Q05787 YEL073CYEL073C 324 nt1.61□□□□□ -2.15
HRD3Q05787 TBS1YBR150C 3285 nt1.6□□□□□ -2.15
HRD3Q05787 tT(UGU)HtT(UGU)H 72 nt1.6□□□□□ -2.15
HRD3Q05787 EMC5YIL027C 426 nt1.6□□□□□ -2.15
HRD3Q05787 YOR381W-AYOR381W-A 168 nt1.6□□□□□ -2.15
HRD3Q05787 COY1YKL179C 2040 nt1.6□□□□□ -2.15
HRD3Q05787 ADR1YDR216W 3972 nt1.6□□□□□ -2.15
HRD3Q05787 YLR035C-AYLR035C-A 3468 nt1.6□□□□□ -2.15
HRD3Q05787 VPS15YBR097W 4365 nt1.59□□□□□ -2.15
HRD3Q05787 YDR354C-AYDR354C-A 144 nt1.59□□□□□ -2.15
HRD3Q05787 IFH1YLR223C 3258 nt1.59□□□□□ -2.16
HRD3Q05787 CTF4YPR135W 2784 nt1.59□□□□□ -2.16
HRD3Q05787 CDC31YOR257W 486 nt1.58□□□□□ -2.16
HRD3Q05787 SAC3YDR159W 3906 nt1.58□□□□□ -2.16
HRD3Q05787 YLR419WYLR419W 4308 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms