Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 HMI1YOL095C 2121 nt2.21□□□□□ -2.06
LCD1Q04377 PIG1YLR273C 1947 nt2.21□□□□□ -2.06
LCD1Q04377 YIR044CYIR044C 186 nt2.21□□□□□ -2.06
LCD1Q04377 DGR2YKL121W 2559 nt2.21□□□□□ -2.06
LCD1Q04377 IRE1YHR079C 3348 nt2.2□□□□□ -2.06
LCD1Q04377 ULI1YFR026C 510 nt2.2□□□□□ -2.06
LCD1Q04377 snR46snR46 197 nt2.2□□□□□ -2.06
LCD1Q04377 YMR045CYMR045C 5268 nt2.19□□□□□ -2.06
LCD1Q04377 YDL007C-AYDL007C-A 258 nt2.19□□□□□ -2.06
LCD1Q04377 YER172C-AYER172C-A 381 nt2.19□□□□□ -2.06
LCD1Q04377 YOR072W-BYOR072W-B 162 nt2.19□□□□□ -2.06
LCD1Q04377 YLL007CYLL007C 1998 nt2.18□□□□□ -2.06
LCD1Q04377 BUD2YKL092C 3315 nt2.18□□□□□ -2.06
LCD1Q04377 COF1YLL050C 432 nt2.18□□□□□ -2.06
LCD1Q04377 HIR3YJR140C 4947 nt2.17□□□□□ -2.06
LCD1Q04377 ATP8Q0080 147 nt2.17□□□□□ -2.06
LCD1Q04377 CUL3YGR003W 2235 nt2.17□□□□□ -2.06
LCD1Q04377 PTP2YOR208W 2253 nt2.16□□□□□ -2.06
LCD1Q04377 GCN2YDR283C 4980 nt2.16□□□□□ -2.06
LCD1Q04377 PAU3YCR104W 375 nt2.15□□□□□ -2.07
LCD1Q04377 RTP1YMR185W 2946 nt2.14□□□□□ -2.07
LCD1Q04377 FRK1YPL141C 2598 nt2.14□□□□□ -2.07
LCD1Q04377 snR52snR52 92 nt2.14□□□□□ -2.07
LCD1Q04377 YNL144CYNL144C 2223 nt2.13□□□□□ -2.07
LCD1Q04377 HER1YOR227W 3741 nt2.13□□□□□ -2.07
LCD1Q04377 SEY1YOR165W 2331 nt2.13□□□□□ -2.07
LCD1Q04377 BPH1YCR032W 6504 nt2.12□□□□□ -2.07
LCD1Q04377 YLL019W-AYLL019W-A 93 nt2.12□□□□□ -2.07
LCD1Q04377 YMR175W-AYMR175W-A 195 nt2.12□□□□□ -2.07
LCD1Q04377 YOR345CYOR345C 351 nt2.12□□□□□ -2.07
LCD1Q04377 YDR521WYDR521W 336 nt2.11□□□□□ -2.07
LCD1Q04377 SEC63YOR254C 1992 nt2.1□□□□□ -2.07
LCD1Q04377 PIP2YOR363C 2991 nt2.1□□□□□ -2.07
LCD1Q04377 YDL196WYDL196W 330 nt2.1□□□□□ -2.07
LCD1Q04377 YOR170WYOR170W 306 nt2.1□□□□□ -2.07
LCD1Q04377 AHC1YOR023C 1701 nt2.1□□□□□ -2.07
LCD1Q04377 LRE1YCL051W 1752 nt2.1□□□□□ -2.07
LCD1Q04377 TDA9YML081W 3756 nt2.1□□□□□ -2.07
LCD1Q04377 ALK1YGL021W 2283 nt2.1□□□□□ -2.07
LCD1Q04377 NCA2YPR155C 1851 nt2.09□□□□□ -2.07
LCD1Q04377 HSL1YKL101W 4557 nt2.09□□□□□ -2.08
LCD1Q04377 RPL33BYOR234C 324 nt2.08□□□□□ -2.08
LCD1Q04377 AIM44YPL158C 2277 nt2.08□□□□□ -2.08
LCD1Q04377 YLR035C-AYLR035C-A 3468 nt2.07□□□□□ -2.08
LCD1Q04377 SLI15YBR156C 2097 nt2.07□□□□□ -2.08
LCD1Q04377 YHR210CYHR210C 1026 nt2.07□□□□□ -2.08
LCD1Q04377 SFB2YNL049C 2631 nt2.07□□□□□ -2.08
LCD1Q04377 FIG4YNL325C 2640 nt2.07□□□□□ -2.08
LCD1Q04377 PBY1YBR094W 2262 nt2.07□□□□□ -2.08
LCD1Q04377 COG4YPR105C 2586 nt2.06□□□□□ -2.08
LCD1Q04377 PKH2YOL100W 3246 nt2.06□□□□□ -2.08
LCD1Q04377 MSH6YDR097C 3729 nt2.06□□□□□ -2.08
LCD1Q04377 IFH1YLR223C 3258 nt2.05□□□□□ -2.08
LCD1Q04377 YOR093CYOR093C 4947 nt2.05□□□□□ -2.08
LCD1Q04377 YOR381W-AYOR381W-A 168 nt2.05□□□□□ -2.08
LCD1Q04377 YBR206WYBR206W 324 nt2.05□□□□□ -2.08
LCD1Q04377 MYO4YAL029C 4416 nt2.05□□□□□ -2.08
LCD1Q04377 SLD3YGL113W 2007 nt2.05□□□□□ -2.08
LCD1Q04377 UTP21YLR409C 2820 nt2.04□□□□□ -2.08
LCD1Q04377 ATG9YDL149W 2994 nt2.04□□□□□ -2.08
LCD1Q04377 YNL170WYNL170W 396 nt2.03□□□□□ -2.08
LCD1Q04377 PDR8YLR266C 2106 nt2.03□□□□□ -2.08
LCD1Q04377 MGA2YIR033W 3342 nt2.02□□□□□ -2.09
LCD1Q04377 PMP1YCR024C-A 123 nt2.02□□□□□ -2.09
LCD1Q04377 YEL073CYEL073C 324 nt2.02□□□□□ -2.09
LCD1Q04377 SPO24YPR036W-A 204 nt2.02□□□□□ -2.09
LCD1Q04377 COY1YKL179C 2040 nt2.01□□□□□ -2.09
LCD1Q04377 YOR161W-BYOR161W-B 261 nt2.01□□□□□ -2.09
LCD1Q04377 YGR109W-BYGR109W-B 4644 nt2.01□□□□□ -2.09
LCD1Q04377 CTF4YPR135W 2784 nt2□□□□□ -2.09
LCD1Q04377 HAL9YOL089C 3093 nt2□□□□□ -2.09
LCD1Q04377 YMR272W-BYMR272W-B 108 nt2□□□□□ -2.09
LCD1Q04377 UBR2YLR024C 5619 nt2□□□□□ -2.09
LCD1Q04377 SBE22YHR103W 2559 nt1.99□□□□□ -2.09
LCD1Q04377 YHR214C-BYHR214C-B 5382 nt1.98□□□□□ -2.09
LCD1Q04377 YDR354C-AYDR354C-A 144 nt1.98□□□□□ -2.09
LCD1Q04377 NUT1YGL151W 3399 nt1.98□□□□□ -2.09
LCD1Q04377 YJR039WYJR039W 3366 nt1.98□□□□□ -2.09
LCD1Q04377 FAB1YFR019W 6837 nt1.97□□□□□ -2.09
LCD1Q04377 ADR1YDR216W 3972 nt1.97□□□□□ -2.09
LCD1Q04377 EMC5YIL027C 426 nt1.97□□□□□ -2.09
LCD1Q04377 TMA7YLR262C-A 195 nt1.97□□□□□ -2.09
LCD1Q04377 IRC20YLR247C 4671 nt1.97□□□□□ -2.09
LCD1Q04377 SDH6YDR379C-A 240 nt1.96□□□□□ -2.1
LCD1Q04377 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
LCD1Q04377 HUG1YML058W-A 207 nt1.95□□□□□ -2.1
LCD1Q04377 RAD50YNL250W 3939 nt1.95□□□□□ -2.1
LCD1Q04377 LHS1YKL073W 2646 nt1.94□□□□□ -2.1
LCD1Q04377 YLR419WYLR419W 4308 nt1.94□□□□□ -2.1
LCD1Q04377 TRM3YDL112W 4311 nt1.93□□□□□ -2.1
LCD1Q04377 YGR164WYGR164W 336 nt1.93□□□□□ -2.1
LCD1Q04377 YIL134C-AYIL134C-A 204 nt1.93□□□□□ -2.1
LCD1Q04377 MYO2YOR326W 4725 nt1.93□□□□□ -2.1
LCD1Q04377 MDS3YGL197W 4464 nt1.93□□□□□ -2.1
LCD1Q04377 TBS1YBR150C 3285 nt1.92□□□□□ -2.1
LCD1Q04377 YDL206WYDL206W 2289 nt1.92□□□□□ -2.1
LCD1Q04377 NUP192YJL039C 5052 nt1.92□□□□□ -2.1
LCD1Q04377 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
LCD1Q04377 RPS30BYOR182C 192 nt1.91□□□□□ -2.1
LCD1Q04377 ALY2YJL084C 3141 nt1.91□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 53.6 ms