Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 BRE1YDL074C 2103 nt1.99□□□□□ -2.09
CTK1Q03957 DGR2YKL121W 2559 nt1.99□□□□□ -2.09
CTK1Q03957 RTT101YJL047C 2529 nt1.98□□□□□ -2.09
CTK1Q03957 CTR9YOL145C 3234 nt1.98□□□□□ -2.09
CTK1Q03957 PMP1YCR024C-A 123 nt1.98□□□□□ -2.09
CTK1Q03957 YDL196WYDL196W 330 nt1.98□□□□□ -2.09
CTK1Q03957 YLL019W-AYLL019W-A 93 nt1.98□□□□□ -2.09
CTK1Q03957 DGR1YNL130C-A 147 nt1.98□□□□□ -2.09
CTK1Q03957 TOR2YKL203C 7425 nt1.98□□□□□ -2.09
CTK1Q03957 PET309YLR067C 2898 nt1.98□□□□□ -2.09
CTK1Q03957 UBP2YOR124C 3819 nt1.98□□□□□ -2.09
CTK1Q03957 SPP41YDR464W 4308 nt1.97□□□□□ -2.09
CTK1Q03957 AHC1YOR023C 1701 nt1.97□□□□□ -2.09
CTK1Q03957 HMI1YOL095C 2121 nt1.96□□□□□ -2.1
CTK1Q03957 YDR521WYDR521W 336 nt1.96□□□□□ -2.1
CTK1Q03957 PTP2YOR208W 2253 nt1.96□□□□□ -2.1
CTK1Q03957 IST2YBR086C 2841 nt1.95□□□□□ -2.1
CTK1Q03957 GYP5YPL249C 2685 nt1.95□□□□□ -2.1
CTK1Q03957 YOR161W-BYOR161W-B 261 nt1.95□□□□□ -2.1
CTK1Q03957 CUL3YGR003W 2235 nt1.95□□□□□ -2.1
CTK1Q03957 NCA2YPR155C 1851 nt1.94□□□□□ -2.1
CTK1Q03957 IFH1YLR223C 3258 nt1.94□□□□□ -2.1
CTK1Q03957 HAL9YOL089C 3093 nt1.94□□□□□ -2.1
CTK1Q03957 YGR164WYGR164W 336 nt1.94□□□□□ -2.1
CTK1Q03957 YHR210CYHR210C 1026 nt1.94□□□□□ -2.1
CTK1Q03957 COY1YKL179C 2040 nt1.94□□□□□ -2.1
CTK1Q03957 FIG4YNL325C 2640 nt1.94□□□□□ -2.1
CTK1Q03957 ALK1YGL021W 2283 nt1.93□□□□□ -2.1
CTK1Q03957 PIP2YOR363C 2991 nt1.93□□□□□ -2.1
CTK1Q03957 BUD2YKL092C 3315 nt1.93□□□□□ -2.1
CTK1Q03957 YNL144CYNL144C 2223 nt1.93□□□□□ -2.1
CTK1Q03957 YDL118WYDL118W 381 nt1.93□□□□□ -2.1
CTK1Q03957 Q0143Q0143 153 nt1.93□□□□□ -2.1
CTK1Q03957 YMR175W-AYMR175W-A 195 nt1.93□□□□□ -2.1
CTK1Q03957 USO1YDL058W 5373 nt1.93□□□□□ -2.1
CTK1Q03957 KOG1YHR186C 4674 nt1.92□□□□□ -2.1
CTK1Q03957 AIM44YPL158C 2277 nt1.92□□□□□ -2.1
CTK1Q03957 YEL073CYEL073C 324 nt1.92□□□□□ -2.1
CTK1Q03957 YBR206WYBR206W 324 nt1.92□□□□□ -2.1
CTK1Q03957 IRE1YHR079C 3348 nt1.92□□□□□ -2.1
CTK1Q03957 TDA9YML081W 3756 nt1.92□□□□□ -2.1
CTK1Q03957 SIR4YDR227W 4077 nt1.91□□□□□ -2.1
CTK1Q03957 YLR035C-AYLR035C-A 3468 nt1.9□□□□□ -2.1
CTK1Q03957 RGA1YOR127W 3024 nt1.9□□□□□ -2.11
CTK1Q03957 COG4YPR105C 2586 nt1.89□□□□□ -2.11
CTK1Q03957 SLD3YGL113W 2007 nt1.88□□□□□ -2.11
CTK1Q03957 YMR045CYMR045C 5268 nt1.88□□□□□ -2.11
CTK1Q03957 YGR109W-BYGR109W-B 4644 nt1.88□□□□□ -2.11
CTK1Q03957 YER172C-AYER172C-A 381 nt1.88□□□□□ -2.11
CTK1Q03957 YBL053WYBL053W 375 nt1.88□□□□□ -2.11
CTK1Q03957 SEY1YOR165W 2331 nt1.88□□□□□ -2.11
CTK1Q03957 SLI15YBR156C 2097 nt1.87□□□□□ -2.11
CTK1Q03957 YLR419WYLR419W 4308 nt1.87□□□□□ -2.11
CTK1Q03957 NEO1YIL048W 3456 nt1.87□□□□□ -2.11
CTK1Q03957 YIL134C-AYIL134C-A 204 nt1.87□□□□□ -2.11
CTK1Q03957 PRP42YDR235W 1635 nt1.87□□□□□ -2.11
CTK1Q03957 SEC31YDL195W 3822 nt1.87□□□□□ -2.11
CTK1Q03957 PBY1YBR094W 2262 nt1.87□□□□□ -2.11
CTK1Q03957 PKH2YOL100W 3246 nt1.87□□□□□ -2.11
CTK1Q03957 FRK1YPL141C 2598 nt1.86□□□□□ -2.11
CTK1Q03957 YDR354C-AYDR354C-A 144 nt1.86□□□□□ -2.11
CTK1Q03957 SEC63YOR254C 1992 nt1.85□□□□□ -2.11
CTK1Q03957 YJL026C-AYJL026C-A 222 nt1.85□□□□□ -2.11
CTK1Q03957 UBR2YLR024C 5619 nt1.85□□□□□ -2.11
CTK1Q03957 SFB2YNL049C 2631 nt1.85□□□□□ -2.11
CTK1Q03957 HER1YOR227W 3741 nt1.84□□□□□ -2.11
CTK1Q03957 MDS3YGL197W 4464 nt1.83□□□□□ -2.12
CTK1Q03957 SPO24YPR036W-A 204 nt1.83□□□□□ -2.12
CTK1Q03957 MSH6YDR097C 3729 nt1.83□□□□□ -2.12
CTK1Q03957 NUT1YGL151W 3399 nt1.82□□□□□ -2.12
CTK1Q03957 ATG9YDL149W 2994 nt1.82□□□□□ -2.12
CTK1Q03957 YIL020C-AYIL020C-A 339 nt1.82□□□□□ -2.12
CTK1Q03957 UTP21YLR409C 2820 nt1.82□□□□□ -2.12
CTK1Q03957 GCN2YDR283C 4980 nt1.82□□□□□ -2.12
CTK1Q03957 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
CTK1Q03957 YHR214C-BYHR214C-B 5382 nt1.81□□□□□ -2.12
CTK1Q03957 TBS1YBR150C 3285 nt1.8□□□□□ -2.12
CTK1Q03957 PDR8YLR266C 2106 nt1.8□□□□□ -2.12
CTK1Q03957 YMR272W-BYMR272W-B 108 nt1.8□□□□□ -2.12
CTK1Q03957 RPS30BYOR182C 192 nt1.8□□□□□ -2.12
CTK1Q03957 YPL044CYPL044C 549 nt1.8□□□□□ -2.12
CTK1Q03957 PAA1YDR071C 576 nt1.79□□□□□ -2.12
CTK1Q03957 COX12YLR038C 252 nt1.79□□□□□ -2.12
CTK1Q03957 YBR221W-AYBR221W-A 105 nt1.79□□□□□ -2.12
CTK1Q03957 ADR1YDR216W 3972 nt1.79□□□□□ -2.12
CTK1Q03957 TRM3YDL112W 4311 nt1.79□□□□□ -2.12
CTK1Q03957 SBE22YHR103W 2559 nt1.79□□□□□ -2.12
CTK1Q03957 PEP1YBL017C 4740 nt1.79□□□□□ -2.12
CTK1Q03957 SNU13YEL026W 381 nt1.78□□□□□ -2.12
CTK1Q03957 YJR039WYJR039W 3366 nt1.78□□□□□ -2.13
CTK1Q03957 MGA2YIR033W 3342 nt1.78□□□□□ -2.13
CTK1Q03957 MYO4YAL029C 4416 nt1.77□□□□□ -2.13
CTK1Q03957 EMC5YIL027C 426 nt1.76□□□□□ -2.13
CTK1Q03957 YNL205CYNL205C 423 nt1.76□□□□□ -2.13
CTK1Q03957 ALY2YJL084C 3141 nt1.75□□□□□ -2.13
CTK1Q03957 YDL206WYDL206W 2289 nt1.75□□□□□ -2.13
CTK1Q03957 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
CTK1Q03957 POL5YEL055C 3069 nt1.75□□□□□ -2.13
CTK1Q03957 YCR038W-AYCR038W-A 126 nt1.74□□□□□ -2.13
CTK1Q03957 snR48snR48 113 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 136.5 ms