Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 MMS4YBR098W 2076 nt0.95□□□□□ -2.26
SMD1Q02260 SWI4YER111C 3282 nt0.95□□□□□ -2.26
SMD1Q02260 YDL206WYDL206W 2289 nt0.94□□□□□ -2.26
SMD1Q02260 APL3YBL037W 3078 nt0.94□□□□□ -2.26
SMD1Q02260 YOR161W-BYOR161W-B 261 nt0.94□□□□□ -2.26
SMD1Q02260 CDC31YOR257W 486 nt0.94□□□□□ -2.26
SMD1Q02260 REV3YPL167C 4515 nt0.93□□□□□ -2.26
SMD1Q02260 NST1YNL091W 3723 nt0.93□□□□□ -2.26
SMD1Q02260 YCK3YER123W 1575 nt0.93□□□□□ -2.26
SMD1Q02260 NHP2YDL208W 471 nt0.93□□□□□ -2.26
SMD1Q02260 GPG1YGL121C 381 nt0.93□□□□□ -2.26
SMD1Q02260 YLL007CYLL007C 1998 nt0.92□□□□□ -2.26
SMD1Q02260 OST1YJL002C 1431 nt0.92□□□□□ -2.26
SMD1Q02260 YDR169C-AYDR169C-A 150 nt0.92□□□□□ -2.26
SMD1Q02260 YFL032WYFL032W 321 nt0.92□□□□□ -2.26
SMD1Q02260 YIR044CYIR044C 186 nt0.92□□□□□ -2.26
SMD1Q02260 DBP6YNR038W 1890 nt0.92□□□□□ -2.26
SMD1Q02260 CDC39YCR093W 6327 nt0.92□□□□□ -2.26
SMD1Q02260 APL1YJR005W 2103 nt0.91□□□□□ -2.26
SMD1Q02260 SSS1YDR086C 243 nt0.91□□□□□ -2.26
SMD1Q02260 YDR413CYDR413C 576 nt0.91□□□□□ -2.26
SMD1Q02260 Q0142Q0142 177 nt0.91□□□□□ -2.26
SMD1Q02260 YKL118WYKL118W 312 nt0.91□□□□□ -2.26
SMD1Q02260 IFH1YLR223C 3258 nt0.91□□□□□ -2.26
SMD1Q02260 PDE2YOR360C 1581 nt0.91□□□□□ -2.26
SMD1Q02260 GEA2YEL022W 4380 nt0.91□□□□□ -2.26
SMD1Q02260 ALY2YJL084C 3141 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)E1tH(GUG)E1 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)E2tH(GUG)E2 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)G1tH(GUG)G1 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)G2tH(GUG)G2 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)HtH(GUG)H 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)KtH(GUG)K 72 nt0.9□□□□□ -2.27
SMD1Q02260 tH(GUG)MtH(GUG)M 72 nt0.9□□□□□ -2.27
SMD1Q02260 YKL136WYKL136W 399 nt0.9□□□□□ -2.27
SMD1Q02260 YBR206WYBR206W 324 nt0.9□□□□□ -2.27
SMD1Q02260 EAF1YDR359C 2949 nt0.9□□□□□ -2.27
SMD1Q02260 PTP2YOR208W 2253 nt0.9□□□□□ -2.27
SMD1Q02260 CAT8YMR280C 4302 nt0.9□□□□□ -2.27
SMD1Q02260 YAR009CYAR009C 3591 nt0.89□□□□□ -2.27
SMD1Q02260 YDR521WYDR521W 336 nt0.89□□□□□ -2.27
SMD1Q02260 RPL33BYOR234C 324 nt0.89□□□□□ -2.27
SMD1Q02260 YBR200W-AYBR200W-A 165 nt0.89□□□□□ -2.27
SMD1Q02260 STB6YKL072W 2301 nt0.89□□□□□ -2.27
SMD1Q02260 NUP145YGL092W 3954 nt0.89□□□□□ -2.27
SMD1Q02260 WAR1YML076C 2835 nt0.88□□□□□ -2.27
SMD1Q02260 YDR183C-AYDR183C-A 258 nt0.88□□□□□ -2.27
SMD1Q02260 YIL115W-AYIL115W-A 372 nt0.88□□□□□ -2.27
SMD1Q02260 YJR029WYJR029W 5268 nt0.88□□□□□ -2.27
SMD1Q02260 YPR137C-BYPR137C-B 5268 nt0.88□□□□□ -2.27
SMD1Q02260 YER097WYER097W 330 nt0.87□□□□□ -2.27
SMD1Q02260 SMC1YFL008W 3678 nt0.87□□□□□ -2.27
SMD1Q02260 snR60snR60 104 nt0.86□□□□□ -2.27
SMD1Q02260 HMRA2YCR096C 360 nt0.86□□□□□ -2.27
SMD1Q02260 YFL063WYFL063W 456 nt0.86□□□□□ -2.27
SMD1Q02260 YGL149WYGL149W 306 nt0.86□□□□□ -2.27
SMD1Q02260 ECM12YHR021W-A 456 nt0.86□□□□□ -2.27
SMD1Q02260 INA22YIR024C 651 nt0.86□□□□□ -2.27
SMD1Q02260 YBR064WYBR064W 429 nt0.86□□□□□ -2.27
SMD1Q02260 VAM6YDL077C 3150 nt0.85□□□□□ -2.27
SMD1Q02260 HTL1YCR020W-B 237 nt0.85□□□□□ -2.27
SMD1Q02260 YIL032CYIL032C 357 nt0.85□□□□□ -2.27
SMD1Q02260 RPS25BYLR333C 327 nt0.85□□□□□ -2.27
SMD1Q02260 YOR011W-AYOR011W-A 207 nt0.85□□□□□ -2.27
SMD1Q02260 SEC3YER008C 4011 nt0.85□□□□□ -2.27
SMD1Q02260 NUP192YJL039C 5052 nt0.85□□□□□ -2.27
SMD1Q02260 SPO75YLL005C 2607 nt0.85□□□□□ -2.27
SMD1Q02260 YDR344CYDR344C 444 nt0.84□□□□□ -2.27
SMD1Q02260 YMR193C-AYMR193C-A 387 nt0.84□□□□□ -2.27
SMD1Q02260 SPO21YOL091W 1830 nt0.84□□□□□ -2.28
SMD1Q02260 YJL120WYJL120W 324 nt0.83□□□□□ -2.28
SMD1Q02260 PAN2YGL094C 3348 nt0.83□□□□□ -2.28
SMD1Q02260 YCS4YLR272C 3531 nt0.82□□□□□ -2.28
SMD1Q02260 STE5YDR103W 2754 nt0.82□□□□□ -2.28
SMD1Q02260 VIK1YPL253C 1944 nt0.81□□□□□ -2.28
SMD1Q02260 COG8YML071C 1824 nt0.81□□□□□ -2.28
SMD1Q02260 NUP157YER105C 4176 nt0.8□□□□□ -2.28
SMD1Q02260 OLI1Q0130 231 nt0.8□□□□□ -2.28
SMD1Q02260 EMT1tM(CAU)D 73 nt0.8□□□□□ -2.28
SMD1Q02260 EMT5tM(CAU)J1 73 nt0.8□□□□□ -2.28
SMD1Q02260 EMT3tM(CAU)J2 73 nt0.8□□□□□ -2.28
SMD1Q02260 EMT4tM(CAU)M 73 nt0.8□□□□□ -2.28
SMD1Q02260 EMT2tM(CAU)O2 73 nt0.8□□□□□ -2.28
SMD1Q02260 tV(UAC)BtV(UAC)B 74 nt0.8□□□□□ -2.28
SMD1Q02260 tV(UAC)DtV(UAC)D 74 nt0.8□□□□□ -2.28
SMD1Q02260 RPL39YJL189W 156 nt0.8□□□□□ -2.28
SMD1Q02260 SGF11YPL047W 300 nt0.8□□□□□ -2.28
SMD1Q02260 MCM10YIL150C 1716 nt0.8□□□□□ -2.28
SMD1Q02260 YHL042WYHL042W 453 nt0.79□□□□□ -2.28
SMD1Q02260 YMR321CYMR321C 318 nt0.79□□□□□ -2.28
SMD1Q02260 CLU1YMR012W 3834 nt0.79□□□□□ -2.28
SMD1Q02260 ROM2YLR371W 4071 nt0.78□□□□□ -2.28
SMD1Q02260 ALG13YGL047W 609 nt0.78□□□□□ -2.28
SMD1Q02260 RPS27BYHR021C 249 nt0.78□□□□□ -2.28
SMD1Q02260 YMR031W-AYMR031W-A 327 nt0.78□□□□□ -2.28
SMD1Q02260 SPT7YBR081C 3999 nt0.78□□□□□ -2.28
SMD1Q02260 SCC2YDR180W 4482 nt0.77□□□□□ -2.29
SMD1Q02260 CSE2YNR010W 450 nt0.77□□□□□ -2.29
SMD1Q02260 YOR218CYOR218C 420 nt0.77□□□□□ -2.29
SMD1Q02260 YDL196WYDL196W 330 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 37.1 ms