Protein–RNA interactions for Protein: Q01454

CTF4, DNA polymerase alpha-binding protein, yeastyeast

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF4Q01454 YBR221W-AYBR221W-A 105 nt2.35□□□□□ -2.03
CTF4Q01454 NCA2YPR155C 1851 nt2.35□□□□□ -2.03
CTF4Q01454 SWI6YLR182W 2412 nt2.34□□□□□ -2.03
CTF4Q01454 SNF5YBR289W 2718 nt2.34□□□□□ -2.03
CTF4Q01454 NUP192YJL039C 5052 nt2.34□□□□□ -2.03
CTF4Q01454 SRP14YDL092W 441 nt2.34□□□□□ -2.03
CTF4Q01454 YHR073W-AYHR073W-A 177 nt2.34□□□□□ -2.03
CTF4Q01454 YJL120WYJL120W 324 nt2.34□□□□□ -2.03
CTF4Q01454 RFX1YLR176C 2436 nt2.33□□□□□ -2.04
CTF4Q01454 YLR282CYLR282C 342 nt2.33□□□□□ -2.04
CTF4Q01454 RPS25BYLR333C 327 nt2.33□□□□□ -2.04
CTF4Q01454 YNL114CYNL114C 372 nt2.33□□□□□ -2.04
CTF4Q01454 YPL044CYPL044C 549 nt2.33□□□□□ -2.04
CTF4Q01454 RTT107YHR154W 3213 nt2.32□□□□□ -2.04
CTF4Q01454 SMY1YKL079W 1971 nt2.32□□□□□ -2.04
CTF4Q01454 MNE1YOR350C 1992 nt2.32□□□□□ -2.04
CTF4Q01454 VMR1YHL035C 4779 nt2.32□□□□□ -2.04
CTF4Q01454 TOR2YKL203C 7425 nt2.32□□□□□ -2.04
CTF4Q01454 SET2YJL168C 2202 nt2.32□□□□□ -2.04
CTF4Q01454 TRM3YDL112W 4311 nt2.32□□□□□ -2.04
CTF4Q01454 YMR272W-BYMR272W-B 108 nt2.32□□□□□ -2.04
CTF4Q01454 YNL211CYNL211C 261 nt2.32□□□□□ -2.04
CTF4Q01454 HAL9YOL089C 3093 nt2.32□□□□□ -2.04
CTF4Q01454 UBR1YGR184C 5853 nt2.31□□□□□ -2.04
CTF4Q01454 CMC4YMR194C-B 222 nt2.31□□□□□ -2.04
CTF4Q01454 MYO4YAL029C 4416 nt2.31□□□□□ -2.04
CTF4Q01454 STB4YMR019W 2850 nt2.3□□□□□ -2.04
CTF4Q01454 OST4YDL232W 111 nt2.3□□□□□ -2.04
CTF4Q01454 YBR277CYBR277C 402 nt2.3□□□□□ -2.04
CTF4Q01454 USO1YDL058W 5373 nt2.3□□□□□ -2.04
CTF4Q01454 NOC3YLR002C 1992 nt2.3□□□□□ -2.04
CTF4Q01454 SWI5YDR146C 2130 nt2.3□□□□□ -2.04
CTF4Q01454 AIM44YPL158C 2277 nt2.29□□□□□ -2.04
CTF4Q01454 YCR043CYCR043C 384 nt2.29□□□□□ -2.04
CTF4Q01454 YDL118WYDL118W 381 nt2.29□□□□□ -2.04
CTF4Q01454 FMP16YDR070C 282 nt2.29□□□□□ -2.04
CTF4Q01454 YIL134C-AYIL134C-A 204 nt2.29□□□□□ -2.04
CTF4Q01454 BUD2YKL092C 3315 nt2.28□□□□□ -2.04
CTF4Q01454 ATG9YDL149W 2994 nt2.28□□□□□ -2.04
CTF4Q01454 YLL066W-BYLL066W-B 171 nt2.28□□□□□ -2.04
CTF4Q01454 SLY1YDR189W 2001 nt2.28□□□□□ -2.04
CTF4Q01454 SAC3YDR159W 3906 nt2.28□□□□□ -2.04
CTF4Q01454 LYS14YDR034C 2373 nt2.28□□□□□ -2.05
CTF4Q01454 CFT1YDR301W 4074 nt2.27□□□□□ -2.05
CTF4Q01454 YOR394C-AYOR394C-A 168 nt2.27□□□□□ -2.05
CTF4Q01454 YCL046WYCL046W 324 nt2.27□□□□□ -2.05
CTF4Q01454 VPS8YAL002W 3825 nt2.27□□□□□ -2.05
CTF4Q01454 tS(GCU)Q1tS(GCU)Q1 86 nt2.26□□□□□ -2.05
CTF4Q01454 MET18YIL128W 3099 nt2.26□□□□□ -2.05
CTF4Q01454 SPO22YIL073C 2928 nt2.26□□□□□ -2.05
CTF4Q01454 RRP6YOR001W 2202 nt2.26□□□□□ -2.05
CTF4Q01454 DCP2YNL118C 2913 nt2.25□□□□□ -2.05
CTF4Q01454 PBY1YBR094W 2262 nt2.25□□□□□ -2.05
CTF4Q01454 RIC1YLR039C 3171 nt2.25□□□□□ -2.05
CTF4Q01454 SCH9YHR205W 2475 nt2.25□□□□□ -2.05
CTF4Q01454 MGA2YIR033W 3342 nt2.25□□□□□ -2.05
CTF4Q01454 PAU18YLL064C 363 nt2.25□□□□□ -2.05
CTF4Q01454 PDR8YLR266C 2106 nt2.25□□□□□ -2.05
CTF4Q01454 PAU6YNR076W 363 nt2.25□□□□□ -2.05
CTF4Q01454 snR45snR45 172 nt2.25□□□□□ -2.05
CTF4Q01454 CTF4YPR135W 2784 nt2.25□□□□□ -2.05
CTF4Q01454 YHR214C-BYHR214C-B 5382 nt2.24□□□□□ -2.05
CTF4Q01454 MEC1YBR136W 7107 nt2.24□□□□□ -2.05
CTF4Q01454 TRL1YJL087C 2484 nt2.24□□□□□ -2.05
CTF4Q01454 RPL31AYDL075W 342 nt2.24□□□□□ -2.05
CTF4Q01454 TMA7YLR262C-A 195 nt2.24□□□□□ -2.05
CTF4Q01454 SNC1YAL030W 354 nt2.23□□□□□ -2.05
CTF4Q01454 RPS30BYOR182C 192 nt2.23□□□□□ -2.05
CTF4Q01454 PIP2YOR363C 2991 nt2.23□□□□□ -2.05
CTF4Q01454 MNL2YLR057W 2550 nt2.23□□□□□ -2.05
CTF4Q01454 SOM1YEL059C-A 225 nt2.22□□□□□ -2.05
CTF4Q01454 CAT2YML042W 2013 nt2.22□□□□□ -2.05
CTF4Q01454 MMS22YLR320W 4365 nt2.21□□□□□ -2.06
CTF4Q01454 YCR038W-AYCR038W-A 126 nt2.21□□□□□ -2.06
CTF4Q01454 CDC60YPL160W 3273 nt2.21□□□□□ -2.06
CTF4Q01454 YBR206WYBR206W 324 nt2.2□□□□□ -2.06
CTF4Q01454 HSL1YKL101W 4557 nt2.2□□□□□ -2.06
CTF4Q01454 SBE22YHR103W 2559 nt2.2□□□□□ -2.06
CTF4Q01454 YOR019WYOR019W 2193 nt2.2□□□□□ -2.06
CTF4Q01454 BPH1YCR032W 6504 nt2.19□□□□□ -2.06
CTF4Q01454 RAD34YDR314C 2079 nt2.18□□□□□ -2.06
CTF4Q01454 CRM1YGR218W 3255 nt2.17□□□□□ -2.06
CTF4Q01454 MGM1YOR211C 2646 nt2.17□□□□□ -2.06
CTF4Q01454 YMR242W-AYMR242W-A 90 nt2.17□□□□□ -2.06
CTF4Q01454 SLM1YIL105C 2061 nt2.16□□□□□ -2.06
CTF4Q01454 MSH3YCR092C 3057 nt2.16□□□□□ -2.06
CTF4Q01454 YDR354C-AYDR354C-A 144 nt2.16□□□□□ -2.06
CTF4Q01454 NAM7YMR080C 2916 nt2.16□□□□□ -2.06
CTF4Q01454 ZIP2YGL249W 2115 nt2.15□□□□□ -2.06
CTF4Q01454 SLD3YGL113W 2007 nt2.15□□□□□ -2.06
CTF4Q01454 MYO2YOR326W 4725 nt2.15□□□□□ -2.06
CTF4Q01454 YKR075W-AYKR075W-A 270 nt2.15□□□□□ -2.07
CTF4Q01454 CAT8YMR280C 4302 nt2.15□□□□□ -2.07
CTF4Q01454 COX12YLR038C 252 nt2.14□□□□□ -2.07
CTF4Q01454 IRR1YIL026C 3453 nt2.14□□□□□ -2.07
CTF4Q01454 GCN2YDR283C 4980 nt2.13□□□□□ -2.07
CTF4Q01454 AGC1YPR021C 2709 nt2.13□□□□□ -2.07
CTF4Q01454 RCO1YMR075W 2055 nt2.13□□□□□ -2.07
CTF4Q01454 CHS6YJL099W 2241 nt2.13□□□□□ -2.07
CTF4Q01454 PRP5YBR237W 2550 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms