Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 UTP21YLR409C 2820 nt1.52□□□□□ -2.17
TDA7P53882 SPO21YOL091W 1830 nt1.52□□□□□ -2.17
TDA7P53882 LRE1YCL051W 1752 nt1.52□□□□□ -2.17
TDA7P53882 LHS1YKL073W 2646 nt1.52□□□□□ -2.17
TDA7P53882 BPH1YCR032W 6504 nt1.51□□□□□ -2.17
TDA7P53882 RPL31AYDL075W 342 nt1.51□□□□□ -2.17
TDA7P53882 tF(GAA)QtF(GAA)Q 75 nt1.51□□□□□ -2.17
TDA7P53882 YIR044CYIR044C 186 nt1.51□□□□□ -2.17
TDA7P53882 YJL120WYJL120W 324 nt1.51□□□□□ -2.17
TDA7P53882 PFD1YJL179W 330 nt1.51□□□□□ -2.17
TDA7P53882 BLI1YKL061W 342 nt1.51□□□□□ -2.17
TDA7P53882 YBL008W-AYBL008W-A 240 nt1.51□□□□□ -2.17
TDA7P53882 YOR011W-AYOR011W-A 207 nt1.51□□□□□ -2.17
TDA7P53882 LAA1YJL207C 6045 nt1.5□□□□□ -2.17
TDA7P53882 GPG1YGL121C 381 nt1.5□□□□□ -2.17
TDA7P53882 RPS25BYLR333C 327 nt1.5□□□□□ -2.17
TDA7P53882 YMR247W-AYMR247W-A 144 nt1.5□□□□□ -2.17
TDA7P53882 YOR218CYOR218C 420 nt1.5□□□□□ -2.17
TDA7P53882 YPR092WYPR092W 306 nt1.49□□□□□ -2.17
TDA7P53882 YGR130CYGR130C 2451 nt1.49□□□□□ -2.17
TDA7P53882 YMR046W-AYMR046W-A 129 nt1.48□□□□□ -2.17
TDA7P53882 SPO24YPR036W-A 204 nt1.48□□□□□ -2.17
TDA7P53882 CUL3YGR003W 2235 nt1.47□□□□□ -2.17
TDA7P53882 NUT1YGL151W 3399 nt1.46□□□□□ -2.18
TDA7P53882 SKI3YPR189W 4299 nt1.46□□□□□ -2.18
TDA7P53882 tT(UGU)HtT(UGU)H 72 nt1.46□□□□□ -2.18
TDA7P53882 EMC5YIL027C 426 nt1.46□□□□□ -2.18
TDA7P53882 APQ12YIL040W 417 nt1.46□□□□□ -2.18
TDA7P53882 YMR230W-AYMR230W-A 189 nt1.46□□□□□ -2.18
TDA7P53882 YOR302WYOR302W 78 nt1.46□□□□□ -2.18
TDA7P53882 KCS1YDR017C 3153 nt1.46□□□□□ -2.18
TDA7P53882 SLI15YBR156C 2097 nt1.46□□□□□ -2.18
TDA7P53882 COG4YPR105C 2586 nt1.46□□□□□ -2.18
TDA7P53882 MON2YNL297C 4911 nt1.45□□□□□ -2.18
TDA7P53882 YLL007CYLL007C 1998 nt1.45□□□□□ -2.18
TDA7P53882 PTP2YOR208W 2253 nt1.45□□□□□ -2.18
TDA7P53882 PAU3YCR104W 375 nt1.45□□□□□ -2.18
TDA7P53882 snR74snR74 88 nt1.45□□□□□ -2.18
TDA7P53882 YBR174CYBR174C 315 nt1.45□□□□□ -2.18
TDA7P53882 SXM1YDR395W 2835 nt1.45□□□□□ -2.18
TDA7P53882 IRA1YBR140C 9279 nt1.44□□□□□ -2.18
TDA7P53882 ALK1YGL021W 2283 nt1.44□□□□□ -2.18
TDA7P53882 YDR406W-AYDR406W-A 246 nt1.44□□□□□ -2.18
TDA7P53882 YDR521WYDR521W 336 nt1.44□□□□□ -2.18
TDA7P53882 VPS55YJR044C 423 nt1.44□□□□□ -2.18
TDA7P53882 RRT15YLR162W-A 189 nt1.44□□□□□ -2.18
TDA7P53882 SGF11YPL047W 300 nt1.44□□□□□ -2.18
TDA7P53882 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
TDA7P53882 FIG2YCR089W 4830 nt1.43□□□□□ -2.18
TDA7P53882 SEC5YDR166C 2916 nt1.43□□□□□ -2.18
TDA7P53882 PKH2YOL100W 3246 nt1.43□□□□□ -2.18
TDA7P53882 MCM10YIL150C 1716 nt1.43□□□□□ -2.18
TDA7P53882 RAD50YNL250W 3939 nt1.43□□□□□ -2.18
TDA7P53882 IML1YJR138W 4755 nt1.42□□□□□ -2.18
TDA7P53882 PIK1YNL267W 3201 nt1.42□□□□□ -2.18
TDA7P53882 IFH1YLR223C 3258 nt1.42□□□□□ -2.18
TDA7P53882 UFD2YDL190C 2886 nt1.41□□□□□ -2.18
TDA7P53882 YGL217CYGL217C 342 nt1.41□□□□□ -2.18
TDA7P53882 YJL022WYJL022W 309 nt1.41□□□□□ -2.18
TDA7P53882 PAM16YJL104W 450 nt1.41□□□□□ -2.18
TDA7P53882 YBR206WYBR206W 324 nt1.41□□□□□ -2.18
TDA7P53882 PMD1YER132C 5262 nt1.41□□□□□ -2.18
TDA7P53882 SAC3YDR159W 3906 nt1.4□□□□□ -2.19
TDA7P53882 YCR018C-AYCR018C-A 255 nt1.4□□□□□ -2.19
TDA7P53882 YIR030W-AYIR030W-A 384 nt1.4□□□□□ -2.19
TDA7P53882 COF1YLL050C 432 nt1.4□□□□□ -2.19
TDA7P53882 YNL337WYNL337W 255 nt1.4□□□□□ -2.19
TDA7P53882 YBR182C-AYBR182C-A 195 nt1.4□□□□□ -2.19
TDA7P53882 PBY1YBR094W 2262 nt1.4□□□□□ -2.19
TDA7P53882 SMC4YLR086W 4257 nt1.39□□□□□ -2.19
TDA7P53882 YLR035C-AYLR035C-A 3468 nt1.39□□□□□ -2.19
TDA7P53882 YKU70YMR284W 1809 nt1.39□□□□□ -2.19
TDA7P53882 PKH3YDR466W 2697 nt1.39□□□□□ -2.19
TDA7P53882 YGR109W-BYGR109W-B 4644 nt1.38□□□□□ -2.19
TDA7P53882 ALY2YJL084C 3141 nt1.38□□□□□ -2.19
TDA7P53882 SLX4YLR135W 2247 nt1.38□□□□□ -2.19
TDA7P53882 KAP122YGL016W 3246 nt1.38□□□□□ -2.19
TDA7P53882 TTI1YKL033W 3117 nt1.37□□□□□ -2.19
TDA7P53882 YOR376WYOR376W 369 nt1.37□□□□□ -2.19
TDA7P53882 YCS4YLR272C 3531 nt1.37□□□□□ -2.19
TDA7P53882 ADR1YDR216W 3972 nt1.37□□□□□ -2.19
TDA7P53882 VPS15YBR097W 4365 nt1.36□□□□□ -2.19
TDA7P53882 ECM12YHR021W-A 456 nt1.36□□□□□ -2.19
TDA7P53882 AHC1YOR023C 1701 nt1.36□□□□□ -2.19
TDA7P53882 YOR072W-BYOR072W-B 162 nt1.36□□□□□ -2.19
TDA7P53882 snR14snR14 160 nt1.36□□□□□ -2.19
TDA7P53882 YAR009CYAR009C 3591 nt1.36□□□□□ -2.19
TDA7P53882 YDL206WYDL206W 2289 nt1.35□□□□□ -2.19
TDA7P53882 MDS3YGL197W 4464 nt1.34□□□□□ -2.19
TDA7P53882 OLI1Q0130 231 nt1.34□□□□□ -2.19
TDA7P53882 YLR140WYLR140W 327 nt1.34□□□□□ -2.19
TDA7P53882 NCA2YPR155C 1851 nt1.34□□□□□ -2.19
TDA7P53882 YDL185C-AYDL185C-A 228 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
TDA7P53882 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
TDA7P53882 ISD11YER048W-A 285 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 102.3 ms