Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 EMC5YIL027C 426 nt1.46□□□□□ -2.18
SCD6P45978 IRA1YBR140C 9279 nt1.45□□□□□ -2.18
SCD6P45978 snR8snR8 190 nt1.45□□□□□ -2.18
SCD6P45978 INA22YIR024C 651 nt1.45□□□□□ -2.18
SCD6P45978 YIR044CYIR044C 186 nt1.45□□□□□ -2.18
SCD6P45978 YNL028WYNL028W 318 nt1.45□□□□□ -2.18
SCD6P45978 CSE2YNR010W 450 nt1.45□□□□□ -2.18
SCD6P45978 YGR130CYGR130C 2451 nt1.45□□□□□ -2.18 RIP-Chip
SCD6P45978 RAD50YNL250W 3939 nt1.45□□□□□ -2.18 RIP-Chip
SCD6P45978 YDR366CYDR366C 399 nt1.44□□□□□ -2.18
SCD6P45978 CUL3YGR003W 2235 nt1.43□□□□□ -2.18 RIP-Chip
SCD6P45978 CDC25YLR310C 4770 nt1.43□□□□□ -2.18 RIP-Chip
SCD6P45978 YEL020C-BYEL020C-B 198 nt1.43□□□□□ -2.18
SCD6P45978 YBL008W-AYBL008W-A 240 nt1.43□□□□□ -2.18
SCD6P45978 UFD2YDL190C 2886 nt1.43□□□□□ -2.18 RIP-Chip
SCD6P45978 SLI15YBR156C 2097 nt1.43□□□□□ -2.18 RIP-Chip
SCD6P45978 SPC110YDR356W 2835 nt1.42□□□□□ -2.18
SCD6P45978 NUT1YGL151W 3399 nt1.42□□□□□ -2.18
SCD6P45978 YJL022WYJL022W 309 nt1.42□□□□□ -2.18
SCD6P45978 SPO75YLL005C 2607 nt1.41□□□□□ -2.18
SCD6P45978 COG4YPR105C 2586 nt1.41□□□□□ -2.18 RIP-Chip
SCD6P45978 SMC4YLR086W 4257 nt1.41□□□□□ -2.18 RIP-Chip
SCD6P45978 COF1YLL050C 432 nt1.41□□□□□ -2.18
SCD6P45978 PTP2YOR208W 2253 nt1.41□□□□□ -2.18
SCD6P45978 LAA1YJL207C 6045 nt1.4□□□□□ -2.19
SCD6P45978 YGL217CYGL217C 342 nt1.4□□□□□ -2.19
SCD6P45978 YMR321CYMR321C 318 nt1.4□□□□□ -2.19 RIP-Chip
SCD6P45978 PKH2YOL100W 3246 nt1.4□□□□□ -2.19
SCD6P45978 YLL007CYLL007C 1998 nt1.39□□□□□ -2.19 RIP-Chip
SCD6P45978 BST1YFL025C 3090 nt1.39□□□□□ -2.19 RIP-Chip
SCD6P45978 SLX4YLR135W 2247 nt1.39□□□□□ -2.19 RIP-Chip
SCD6P45978 VPS54YDR027C 2670 nt1.39□□□□□ -2.19 RIP-Chip
SCD6P45978 tQ(UUG)E2tQ(UUG)E2 72 nt1.39□□□□□ -2.19
SCD6P45978 YOR376WYOR376W 369 nt1.39□□□□□ -2.19
SCD6P45978 snR49snR49 165 nt1.39□□□□□ -2.19
SCD6P45978 ALK1YGL021W 2283 nt1.39□□□□□ -2.19 RIP-Chip
SCD6P45978 PDE2YOR360C 1581 nt1.38□□□□□ -2.19
SCD6P45978 NCA2YPR155C 1851 nt1.38□□□□□ -2.19 RIP-Chip
SCD6P45978 YGL188C-AYGL188C-A 141 nt1.38□□□□□ -2.19
SCD6P45978 RPS27BYHR021C 249 nt1.38□□□□□ -2.19
SCD6P45978 YJL197C-AYJL197C-A 282 nt1.38□□□□□ -2.19
SCD6P45978 YLR140WYLR140W 327 nt1.38□□□□□ -2.19
SCD6P45978 RPS25BYLR333C 327 nt1.38□□□□□ -2.19 RIP-Chip
SCD6P45978 YOR218CYOR218C 420 nt1.38□□□□□ -2.19
SCD6P45978 YBR064WYBR064W 429 nt1.38□□□□□ -2.19
SCD6P45978 YLL054CYLL054C 2532 nt1.37□□□□□ -2.19
SCD6P45978 YGL052WYGL052W 306 nt1.37□□□□□ -2.19
SCD6P45978 YJL120WYJL120W 324 nt1.37□□□□□ -2.19
SCD6P45978 YLR120W-AYLR120W-A 102 nt1.37□□□□□ -2.19
SCD6P45978 SPO21YOL091W 1830 nt1.37□□□□□ -2.19
SCD6P45978 PIK1YNL267W 3201 nt1.37□□□□□ -2.19 RIP-Chip
SCD6P45978 ADR1YDR216W 3972 nt1.37□□□□□ -2.19 RIP-Chip
SCD6P45978 PAU12YGR294W 363 nt1.36□□□□□ -2.19 RIP-Chip
SCD6P45978 VPS55YJR044C 423 nt1.36□□□□□ -2.19
SCD6P45978 YMR172C-AYMR172C-A 384 nt1.36□□□□□ -2.19
SCD6P45978 YOR015WYOR015W 360 nt1.36□□□□□ -2.19
SCD6P45978 IES4YOR189W 351 nt1.36□□□□□ -2.19
SCD6P45978 PAU24YBR301W 363 nt1.36□□□□□ -2.19 RIP-Chip
SCD6P45978 IML1YJR138W 4755 nt1.36□□□□□ -2.19
SCD6P45978 AIM44YPL158C 2277 nt1.36□□□□□ -2.19
SCD6P45978 KAP122YGL016W 3246 nt1.36□□□□□ -2.19
SCD6P45978 POL5YEL055C 3069 nt1.36□□□□□ -2.19 RIP-Chip
SCD6P45978 IFH1YLR223C 3258 nt1.35□□□□□ -2.19 RIP-Chip
SCD6P45978 PBY1YBR094W 2262 nt1.35□□□□□ -2.19
SCD6P45978 YDR521WYDR521W 336 nt1.35□□□□□ -2.19
SCD6P45978 HKR1YDR420W 5409 nt1.35□□□□□ -2.19 RIP-Chip
SCD6P45978 GPG1YGL121C 381 nt1.34□□□□□ -2.19
SCD6P45978 YMR158W-BYMR158W-B 321 nt1.34□□□□□ -2.19
SCD6P45978 snR14snR14 160 nt1.34□□□□□ -2.19
SCD6P45978 ALY2YJL084C 3141 nt1.33□□□□□ -2.2 RIP-Chip
SCD6P45978 YOL155W-AYOL155W-A 135 nt1.33□□□□□ -2.2
SCD6P45978 YOR011W-AYOR011W-A 207 nt1.33□□□□□ -2.2
SCD6P45978 MMS4YBR098W 2076 nt1.32□□□□□ -2.2 RIP-Chip
SCD6P45978 snR55snR55 98 nt1.32□□□□□ -2.2
SCD6P45978 tV(UAC)BtV(UAC)B 74 nt1.32□□□□□ -2.2
SCD6P45978 tV(UAC)DtV(UAC)D 74 nt1.32□□□□□ -2.2
SCD6P45978 YCS4YLR272C 3531 nt1.31□□□□□ -2.2 RIP-Chip
SCD6P45978 PIP2YOR363C 2991 nt1.31□□□□□ -2.2
SCD6P45978 YGL041CYGL041C 204 nt1.31□□□□□ -2.2
SCD6P45978 ABF2YMR072W 552 nt1.31□□□□□ -2.2
SCD6P45978 YMR307C-AYMR307C-A 195 nt1.31□□□□□ -2.2
SCD6P45978 RPL33BYOR234C 324 nt1.31□□□□□ -2.2
SCD6P45978 YPR092WYPR092W 306 nt1.31□□□□□ -2.2
SCD6P45978 YBR206WYBR206W 324 nt1.31□□□□□ -2.2
SCD6P45978 YDL206WYDL206W 2289 nt1.31□□□□□ -2.2
SCD6P45978 MCM10YIL150C 1716 nt1.3□□□□□ -2.2
SCD6P45978 YBR174CYBR174C 315 nt1.3□□□□□ -2.2
SCD6P45978 EST2YLR318W 2655 nt1.3□□□□□ -2.2 RIP-Chip
SCD6P45978 snR80snR80 171 nt1.29□□□□□ -2.2
SCD6P45978 YOR161W-BYOR161W-B 261 nt1.29□□□□□ -2.2
SCD6P45978 TRM732YMR259C 4263 nt1.29□□□□□ -2.2 RIP-Chip
SCD6P45978 FIG4YNL325C 2640 nt1.29□□□□□ -2.2 RIP-Chip
SCD6P45978 SMC1YFL008W 3678 nt1.28□□□□□ -2.2 RIP-Chip
SCD6P45978 PET127YOR017W 2403 nt1.28□□□□□ -2.2 RIP-Chip
SCD6P45978 SLD3YGL113W 2007 nt1.28□□□□□ -2.2
SCD6P45978 SEC21YNL287W 2808 nt1.28□□□□□ -2.2 RIP-Chip
SCD6P45978 SIP4YJL089W 2490 nt1.27□□□□□ -2.21
SCD6P45978 PAN2YGL094C 3348 nt1.27□□□□□ -2.21 RIP-Chip
SCD6P45978 TTI1YKL033W 3117 nt1.26□□□□□ -2.21 RIP-Chip
SCD6P45978 AZF1YOR113W 2745 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms