Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 AMS1YGL156W 3252 nt3.83□□□□□ -1.8
PTP3P40048 FLO1YAR050W 4614 nt3.83□□□□□ -1.8
PTP3P40048 COG4YPR105C 2586 nt3.82□□□□□ -1.8
PTP3P40048 SAC3YDR159W 3906 nt3.82□□□□□ -1.8
PTP3P40048 YDR210WYDR210W 228 nt3.82□□□□□ -1.8
PTP3P40048 YGL123C-AYGL123C-A 231 nt3.82□□□□□ -1.8
PTP3P40048 YKL100W-AYKL100W-A 90 nt3.82□□□□□ -1.8
PTP3P40048 SMC6YLR383W 3345 nt3.82□□□□□ -1.8
PTP3P40048 TAH1YCR060W 336 nt3.81□□□□□ -1.8
PTP3P40048 UFD2YDL190C 2886 nt3.81□□□□□ -1.8
PTP3P40048 NMD2YHR077C 3270 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)G1tW(CCA)G1 72 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)G2tW(CCA)G2 72 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)JtW(CCA)J 72 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)KtW(CCA)K 72 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)MtW(CCA)M 72 nt3.8□□□□□ -1.8
PTP3P40048 tW(CCA)PtW(CCA)P 72 nt3.8□□□□□ -1.8
PTP3P40048 TBS1YBR150C 3285 nt3.8□□□□□ -1.8
PTP3P40048 SWR1YDR334W 4545 nt3.8□□□□□ -1.8
PTP3P40048 ISW1YBR245C 3390 nt3.79□□□□□ -1.8
PTP3P40048 YDL206WYDL206W 2289 nt3.79□□□□□ -1.8
PTP3P40048 RAD1YPL022W 3303 nt3.79□□□□□ -1.8
PTP3P40048 SPT6YGR116W 4356 nt3.79□□□□□ -1.8
PTP3P40048 POL5YEL055C 3069 nt3.79□□□□□ -1.8
PTP3P40048 RAD9YDR217C 3930 nt3.78□□□□□ -1.8
PTP3P40048 YIL169CYIL169C 2988 nt3.78□□□□□ -1.8
PTP3P40048 ULS1YOR191W 4860 nt3.78□□□□□ -1.8
PTP3P40048 SRO7YPR032W 3102 nt3.77□□□□□ -1.81
PTP3P40048 IST2YBR086C 2841 nt3.76□□□□□ -1.81
PTP3P40048 YGR109W-BYGR109W-B 4644 nt3.76□□□□□ -1.81
PTP3P40048 YGR146C-AYGR146C-A 162 nt3.76□□□□□ -1.81
PTP3P40048 RTP1YMR185W 2946 nt3.76□□□□□ -1.81
PTP3P40048 CIN8YEL061C 3003 nt3.76□□□□□ -1.81
PTP3P40048 YJL127W-AYJL127W-A 117 nt3.75□□□□□ -1.81
PTP3P40048 PKH2YOL100W 3246 nt3.75□□□□□ -1.81
PTP3P40048 NUP100YKL068W 2880 nt3.75□□□□□ -1.81
PTP3P40048 URA2YJL130C 6645 nt3.74□□□□□ -1.81
PTP3P40048 ILS1YBL076C 3219 nt3.74□□□□□ -1.81
PTP3P40048 DRS2YAL026C 4068 nt3.73□□□□□ -1.81
PTP3P40048 snR50snR50 90 nt3.73□□□□□ -1.81
PTP3P40048 GCN2YDR283C 4980 nt3.72□□□□□ -1.81
PTP3P40048 ASE1YOR058C 2658 nt3.72□□□□□ -1.81
PTP3P40048 ROM2YLR371W 4071 nt3.71□□□□□ -1.82
PTP3P40048 JSN1YJR091C 3276 nt3.71□□□□□ -1.82
PTP3P40048 SIR4YDR227W 4077 nt3.7□□□□□ -1.82
PTP3P40048 CSR2YPR030W 3366 nt3.7□□□□□ -1.82
PTP3P40048 RAX2YLR084C 3663 nt3.7□□□□□ -1.82
PTP3P40048 SLI15YBR156C 2097 nt3.69□□□□□ -1.82
PTP3P40048 YBT1YLL048C 4986 nt3.69□□□□□ -1.82
PTP3P40048 YLR286W-AYLR286W-A 135 nt3.69□□□□□ -1.82
PTP3P40048 SPO71YDR104C 3738 nt3.69□□□□□ -1.82
PTP3P40048 CTR9YOL145C 3234 nt3.68□□□□□ -1.82
PTP3P40048 AGC1YPR021C 2709 nt3.68□□□□□ -1.82
PTP3P40048 YKL096C-BYKL096C-B 150 nt3.68□□□□□ -1.82
PTP3P40048 YML002WYML002W 2214 nt3.68□□□□□ -1.82
PTP3P40048 ADR1YDR216W 3972 nt3.67□□□□□ -1.82
PTP3P40048 SVL3YPL032C 2478 nt3.67□□□□□ -1.82
PTP3P40048 snR75snR75 89 nt3.66□□□□□ -1.82
PTP3P40048 ORC3YLL004W 1851 nt3.64□□□□□ -1.83
PTP3P40048 YLR232WYLR232W 348 nt3.64□□□□□ -1.83
PTP3P40048 YOR161W-AYOR161W-A 81 nt3.64□□□□□ -1.83
PTP3P40048 RPS29AYLR388W 171 nt3.61□□□□□ -1.83
PTP3P40048 snR47snR47 99 nt3.61□□□□□ -1.83
PTP3P40048 REV3YPL167C 4515 nt3.61□□□□□ -1.83
PTP3P40048 RAD26YJR035W 3258 nt3.61□□□□□ -1.83
PTP3P40048 RRP5YMR229C 5190 nt3.61□□□□□ -1.83
PTP3P40048 RSM22YKL155C 1887 nt3.6□□□□□ -1.83
PTP3P40048 RPS21AYKR057W 264 nt3.6□□□□□ -1.83
PTP3P40048 YBR196C-AYBR196C-A 150 nt3.6□□□□□ -1.83
PTP3P40048 GEA1YJR031C 4227 nt3.59□□□□□ -1.83
PTP3P40048 MSH6YDR097C 3729 nt3.59□□□□□ -1.84
PTP3P40048 HSL1YKL101W 4557 nt3.59□□□□□ -1.84
PTP3P40048 FAR11YNL127W 2862 nt3.57□□□□□ -1.84
PTP3P40048 MYO2YOR326W 4725 nt3.56□□□□□ -1.84
PTP3P40048 YIL082W-AYIL082W-A 4497 nt3.56□□□□□ -1.84
PTP3P40048 PAN2YGL094C 3348 nt3.55□□□□□ -1.84
PTP3P40048 YLR041WYLR041W 321 nt3.55□□□□□ -1.84
PTP3P40048 YCS4YLR272C 3531 nt3.54□□□□□ -1.84
PTP3P40048 SEC26YDR238C 2922 nt3.54□□□□□ -1.84
PTP3P40048 SGS1YMR190C 4344 nt3.54□□□□□ -1.84
PTP3P40048 NOP9YJL010C 2001 nt3.54□□□□□ -1.84
PTP3P40048 SPA2YLL021W 4401 nt3.53□□□□□ -1.84
PTP3P40048 FRK1YPL141C 2598 nt3.52□□□□□ -1.85
PTP3P40048 YLR149C-AYLR149C-A 87 nt3.52□□□□□ -1.85
PTP3P40048 STH1YIL126W 4080 nt3.52□□□□□ -1.85
PTP3P40048 MDS3YGL197W 4464 nt3.52□□□□□ -1.85
PTP3P40048 ESL1YIL151C 3357 nt3.51□□□□□ -1.85
PTP3P40048 ALY2YJL084C 3141 nt3.51□□□□□ -1.85
PTP3P40048 PNC1YGL037C 651 nt3.51□□□□□ -1.85
PTP3P40048 TRL1YJL087C 2484 nt3.5□□□□□ -1.85
PTP3P40048 ESL2YKR096W 3588 nt3.5□□□□□ -1.85
PTP3P40048 FKS3YMR306W 5358 nt3.5□□□□□ -1.85
PTP3P40048 SYH1YPL105C 2550 nt3.5□□□□□ -1.85
PTP3P40048 CDC60YPL160W 3273 nt3.5□□□□□ -1.85
PTP3P40048 NUT1YGL151W 3399 nt3.49□□□□□ -1.85
PTP3P40048 YDL073WYDL073W 2955 nt3.48□□□□□ -1.85
PTP3P40048 TOP2YNL088W 4287 nt3.48□□□□□ -1.85
PTP3P40048 IRE1YHR079C 3348 nt3.48□□□□□ -1.85
PTP3P40048 UBP3YER151C 2739 nt3.47□□□□□ -1.85
PTP3P40048 CDC25YLR310C 4770 nt3.46□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 66.9 ms