Protein–RNA interactions for Protein: P39543

SOP4, Protein SOP4, yeastyeast

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOP4P39543 YMR001C-AYMR001C-A 231 nt0.88□□□□□ -2.27
SOP4P39543 IRC23YOR044W 474 nt0.88□□□□□ -2.27
SOP4P39543 YOR072W-AYOR072W-A 249 nt0.88□□□□□ -2.27
SOP4P39543 NUP157YER105C 4176 nt0.88□□□□□ -2.27
SOP4P39543 SMC1YFL008W 3678 nt0.87□□□□□ -2.27
SOP4P39543 YAR009CYAR009C 3591 nt0.87□□□□□ -2.27
SOP4P39543 CUL3YGR003W 2235 nt0.87□□□□□ -2.27
SOP4P39543 RPL38YLR325C 237 nt0.87□□□□□ -2.27
SOP4P39543 YPR002C-AYPR002C-A 198 nt0.87□□□□□ -2.27
SOP4P39543 RIM20YOR275C 1986 nt0.87□□□□□ -2.27
SOP4P39543 YHR138CYHR138C 345 nt0.86□□□□□ -2.27
SOP4P39543 MAM33YIL070C 801 nt0.86□□□□□ -2.27
SOP4P39543 YIR044CYIR044C 186 nt0.86□□□□□ -2.27
SOP4P39543 YBL008W-AYBL008W-A 240 nt0.86□□□□□ -2.27
SOP4P39543 LEE1YPL054W 906 nt0.86□□□□□ -2.27
SOP4P39543 YDR426CYDR426C 378 nt0.85□□□□□ -2.27
SOP4P39543 YER137W-AYER137W-A 306 nt0.85□□□□□ -2.27
SOP4P39543 UBP3YER151C 2739 nt0.85□□□□□ -2.27
SOP4P39543 PAN2YGL094C 3348 nt0.84□□□□□ -2.27
SOP4P39543 YJR029WYJR029W 5268 nt0.84□□□□□ -2.27
SOP4P39543 YPR137C-BYPR137C-B 5268 nt0.84□□□□□ -2.27
SOP4P39543 PAU24YBR301W 363 nt0.84□□□□□ -2.27
SOP4P39543 GEA2YEL022W 4380 nt0.84□□□□□ -2.28
SOP4P39543 NIP100YPL174C 2607 nt0.83□□□□□ -2.28
SOP4P39543 BUD3YCL014W 4911 nt0.82□□□□□ -2.28
SOP4P39543 VAR1Q0140 1197 nt0.82□□□□□ -2.28
SOP4P39543 YJR011CYJR011C 786 nt0.82□□□□□ -2.28
SOP4P39543 PCC1YKR095W-A 267 nt0.82□□□□□ -2.28
SOP4P39543 YOR121CYOR121C 306 nt0.82□□□□□ -2.28
SOP4P39543 YLL007CYLL007C 1998 nt0.82□□□□□ -2.28
SOP4P39543 YLR154W-FYLR154W-F 141 nt0.81□□□□□ -2.28
SOP4P39543 PTP2YOR208W 2253 nt0.8□□□□□ -2.28
SOP4P39543 YDL196WYDL196W 330 nt0.8□□□□□ -2.28
SOP4P39543 YAL068W-AYAL068W-A 255 nt0.8□□□□□ -2.28
SOP4P39543 YOR293C-AYOR293C-A 150 nt0.8□□□□□ -2.28
SOP4P39543 CSN9YDR179C 489 nt0.78□□□□□ -2.28
SOP4P39543 YHL042WYHL042W 453 nt0.78□□□□□ -2.28
SOP4P39543 YDR521WYDR521W 336 nt0.77□□□□□ -2.29
SOP4P39543 YAR053WYAR053W 297 nt0.77□□□□□ -2.29
SOP4P39543 IES4YOR189W 351 nt0.77□□□□□ -2.29
SOP4P39543 DBP6YNR038W 1890 nt0.76□□□□□ -2.29
SOP4P39543 ISD11YER048W-A 285 nt0.76□□□□□ -2.29
SOP4P39543 YBR206WYBR206W 324 nt0.76□□□□□ -2.29
SOP4P39543 ALG13YGL047W 609 nt0.75□□□□□ -2.29
SOP4P39543 YBR064WYBR064W 429 nt0.75□□□□□ -2.29
SOP4P39543 YDR157WYDR157W 402 nt0.74□□□□□ -2.29
SOP4P39543 PRP16YKR086W 3216 nt0.74□□□□□ -2.29
SOP4P39543 PAM16YJL104W 450 nt0.73□□□□□ -2.29
SOP4P39543 YDL073WYDL073W 2955 nt0.72□□□□□ -2.29
SOP4P39543 RKR1YMR247C 4689 nt0.72□□□□□ -2.29
SOP4P39543 NHP2YDL208W 471 nt0.72□□□□□ -2.29
SOP4P39543 YDR344CYDR344C 444 nt0.72□□□□□ -2.29
SOP4P39543 OLI1Q0130 231 nt0.72□□□□□ -2.29
SOP4P39543 YAR029WYAR029W 225 nt0.72□□□□□ -2.29
SOP4P39543 YOR282WYOR282W 321 nt0.72□□□□□ -2.29
SOP4P39543 YCK3YER123W 1575 nt0.71□□□□□ -2.3
SOP4P39543 tW(UCA)QtW(UCA)Q 74 nt0.71□□□□□ -2.3
SOP4P39543 BFR2YDR299W 1605 nt0.71□□□□□ -2.3
SOP4P39543 HMRA2YCR096C 360 nt0.7□□□□□ -2.3
SOP4P39543 ECM12YHR021W-A 456 nt0.7□□□□□ -2.3
SOP4P39543 BIL1YOR304C-A 231 nt0.7□□□□□ -2.3
SOP4P39543 OST1YJL002C 1431 nt0.7□□□□□ -2.3
SOP4P39543 RPL35AYDL191W 363 nt0.69□□□□□ -2.3
SOP4P39543 YGR035CYGR035C 351 nt0.69□□□□□ -2.3
SOP4P39543 HTB2YBL002W 396 nt0.69□□□□□ -2.3
SOP4P39543 YLR334CYLR334C 381 nt0.69□□□□□ -2.3
SOP4P39543 YPL044CYPL044C 549 nt0.69□□□□□ -2.3
SOP4P39543 MCM10YIL150C 1716 nt0.69□□□□□ -2.3
SOP4P39543 STF2YGR008C 255 nt0.68□□□□□ -2.3
SOP4P39543 YAL063C-AYAL063C-A 291 nt0.68□□□□□ -2.3
SOP4P39543 SEC1YDR164C 2175 nt0.67□□□□□ -2.3
SOP4P39543 PMP1YCR024C-A 123 nt0.67□□□□□ -2.3
SOP4P39543 YHR063W-AYHR063W-A 336 nt0.67□□□□□ -2.3
SOP4P39543 YOR011W-AYOR011W-A 207 nt0.67□□□□□ -2.3
SOP4P39543 NOP9YJL010C 2001 nt0.66□□□□□ -2.3
SOP4P39543 RPS25BYLR333C 327 nt0.66□□□□□ -2.3
SOP4P39543 YMR031W-AYMR031W-A 327 nt0.66□□□□□ -2.3
SOP4P39543 CMC4YMR194C-B 222 nt0.66□□□□□ -2.3
SOP4P39543 YOR029WYOR029W 336 nt0.66□□□□□ -2.3
SOP4P39543 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
SOP4P39543 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
SOP4P39543 SPO21YOL091W 1830 nt0.65□□□□□ -2.31
SOP4P39543 HUG1YML058W-A 207 nt0.64□□□□□ -2.31
SOP4P39543 PAA1YDR071C 576 nt0.63□□□□□ -2.31
SOP4P39543 YIL142C-AYIL142C-A 333 nt0.63□□□□□ -2.31
SOP4P39543 YJL120WYJL120W 324 nt0.63□□□□□ -2.31
SOP4P39543 NPR2YEL062W 1848 nt0.62□□□□□ -2.31
SOP4P39543 YFL019CYFL019C 354 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
SOP4P39543 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
SOP4P39543 YDR048CYDR048C 315 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms