Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDH20Q9HBT6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 AC069152.1-201ENST00000438030 544 ntBASIC17.56■□□□□ 0.4
CDH20Q9HBT6 AC097658.1-201ENST00000475555 843 ntBASIC17.56■□□□□ 0.4
CDH20Q9HBT6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 AC142086.2-201ENST00000569753 217 ntBASIC17.56■□□□□ 0.4
CDH20Q9HBT6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.56■□□□□ 0.4
CDH20Q9HBT6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH20Q9HBT6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 AC091874.3-201ENST00000512672 1195 ntBASIC17.55■□□□□ 0.4
CDH20Q9HBT6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 C2orf69P4-201ENST00000565394 541 ntBASIC17.55■□□□□ 0.4
CDH20Q9HBT6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH20Q9HBT6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 AC098934.4-201ENST00000564127 592 ntBASIC17.54■□□□□ 0.4
CDH20Q9HBT6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH20Q9HBT6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDH20Q9HBT6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms