Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PPARGC1BQ86YN6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 TSPY6P-201ENST00000448518 926 ntBASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 CYP2T3P-201ENST00000601990 817 ntBASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC31.71■■■□□ 2.67
PPARGC1BQ86YN6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 OR2A1-AS1-201ENST00000462305 773 ntBASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 AC020907.5-201ENST00000624372 1936 ntBASIC31.7■■■□□ 2.67
PPARGC1BQ86YN6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
PPARGC1BQ86YN6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC31.7■■■□□ 2.66
PPARGC1BQ86YN6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 MIPEPP3-201ENST00000412105 444 ntBASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
PPARGC1BQ86YN6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 KRT8P36-201ENST00000489121 1440 ntBASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 MCRIP2P1-201ENST00000394346 511 ntBASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31.68■■■□□ 2.66
PPARGC1BQ86YN6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 AL356652.1-201ENST00000615962 565 ntBASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PPARGC1BQ86YN6 AC087633.2-202ENST00000565166 1439 ntBASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 KRT18P68-201ENST00000392293 1000 ntBASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PPARGC1BQ86YN6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPARGC1BQ86YN6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms