Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YCL001W-BYCL001W-B 255 nt2.29□□□□□ -2.04
YLR040CQ07988 MNE1YOR350C 1992 nt2.29□□□□□ -2.04
YLR040CQ07988 YDR544CYDR544C 429 nt2.28□□□□□ -2.04
YLR040CQ07988 YMR326CYMR326C 309 nt2.28□□□□□ -2.04
YLR040CQ07988 IRR1YIL026C 3453 nt2.28□□□□□ -2.04
YLR040CQ07988 SET2YJL168C 2202 nt2.27□□□□□ -2.05
YLR040CQ07988 NUP170YBL079W 4509 nt2.27□□□□□ -2.05
YLR040CQ07988 IRA2YOL081W 9240 nt2.27□□□□□ -2.05
YLR040CQ07988 MLH1YMR167W 2310 nt2.27□□□□□ -2.05
YLR040CQ07988 YDL196WYDL196W 330 nt2.27□□□□□ -2.05
YLR040CQ07988 BRP1YGL007W 378 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)G1tW(CCA)G1 72 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)G2tW(CCA)G2 72 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)JtW(CCA)J 72 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)KtW(CCA)K 72 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)MtW(CCA)M 72 nt2.27□□□□□ -2.05
YLR040CQ07988 tW(CCA)PtW(CCA)P 72 nt2.27□□□□□ -2.05
YLR040CQ07988 PAU8YAL068C 363 nt2.27□□□□□ -2.05
YLR040CQ07988 PAU18YLL064C 363 nt2.27□□□□□ -2.05
YLR040CQ07988 RPS25BYLR333C 327 nt2.27□□□□□ -2.05
YLR040CQ07988 PAU6YNR076W 363 nt2.27□□□□□ -2.05
YLR040CQ07988 PAU20YOL161C 363 nt2.27□□□□□ -2.05
YLR040CQ07988 ZRG8YER033C 3231 nt2.27□□□□□ -2.05
YLR040CQ07988 SPF1YEL031W 3648 nt2.27□□□□□ -2.05
YLR040CQ07988 SVL3YPL032C 2478 nt2.27□□□□□ -2.05
YLR040CQ07988 INP53YOR109W 3324 nt2.26□□□□□ -2.05
YLR040CQ07988 TFB5YDR079C-A 219 nt2.26□□□□□ -2.05
YLR040CQ07988 YIL071W-AYIL071W-A 477 nt2.26□□□□□ -2.05
YLR040CQ07988 YJL120WYJL120W 324 nt2.26□□□□□ -2.05
YLR040CQ07988 YLL019W-AYLL019W-A 93 nt2.26□□□□□ -2.05
YLR040CQ07988 YOR394C-AYOR394C-A 168 nt2.26□□□□□ -2.05
YLR040CQ07988 MGM1YOR211C 2646 nt2.26□□□□□ -2.05
YLR040CQ07988 YNL018CYNL018C 1839 nt2.26□□□□□ -2.05
YLR040CQ07988 VPS13YLL040C 9435 nt2.25□□□□□ -2.05
YLR040CQ07988 YCR043CYCR043C 384 nt2.25□□□□□ -2.05
YLR040CQ07988 YHL015W-AYHL015W-A 84 nt2.25□□□□□ -2.05
YLR040CQ07988 PUT3YKL015W 2940 nt2.24□□□□□ -2.05
YLR040CQ07988 FIG4YNL325C 2640 nt2.24□□□□□ -2.05
YLR040CQ07988 NEW1YPL226W 3591 nt2.24□□□□□ -2.05
YLR040CQ07988 RLM1YPL089C 2031 nt2.24□□□□□ -2.05
YLR040CQ07988 YKL165C-AYKL165C-A 234 nt2.24□□□□□ -2.05
YLR040CQ07988 YOR102WYOR102W 351 nt2.24□□□□□ -2.05
YLR040CQ07988 YOR314W-AYOR314W-A 111 nt2.24□□□□□ -2.05
YLR040CQ07988 YBR221W-AYBR221W-A 105 nt2.24□□□□□ -2.05
YLR040CQ07988 CDC53YDL132W 2448 nt2.24□□□□□ -2.05
YLR040CQ07988 HOS4YIL112W 3252 nt2.24□□□□□ -2.05
YLR040CQ07988 VTC3YPL019C 2508 nt2.23□□□□□ -2.05
YLR040CQ07988 AIM44YPL158C 2277 nt2.23□□□□□ -2.05
YLR040CQ07988 YHR032W-AYHR032W-A 180 nt2.23□□□□□ -2.05
YLR040CQ07988 YJL022WYJL022W 309 nt2.23□□□□□ -2.05
YLR040CQ07988 YCL046WYCL046W 324 nt2.23□□□□□ -2.05
YLR040CQ07988 STE11YLR362W 2154 nt2.23□□□□□ -2.05
YLR040CQ07988 INP51YIL002C 2841 nt2.22□□□□□ -2.05
YLR040CQ07988 PAU3YCR104W 375 nt2.22□□□□□ -2.05
YLR040CQ07988 ATP7YKL016C 525 nt2.22□□□□□ -2.05
YLR040CQ07988 TIM9YEL020W-A 264 nt2.21□□□□□ -2.06
YLR040CQ07988 KTI11YBL071W-A 249 nt2.21□□□□□ -2.06
YLR040CQ07988 STH1YIL126W 4080 nt2.21□□□□□ -2.06
YLR040CQ07988 ZRG17YNR039C 1818 nt2.21□□□□□ -2.06
YLR040CQ07988 YIL156W-BYIL156W-B 222 nt2.2□□□□□ -2.06
YLR040CQ07988 YMR242W-AYMR242W-A 90 nt2.2□□□□□ -2.06
YLR040CQ07988 CBF2YGR140W 2871 nt2.2□□□□□ -2.06
YLR040CQ07988 HAL9YOL089C 3093 nt2.2□□□□□ -2.06
YLR040CQ07988 PHO91YNR013C 2685 nt2.2□□□□□ -2.06
YLR040CQ07988 TRS130YMR218C 3309 nt2.2□□□□□ -2.06
YLR040CQ07988 ZIP2YGL249W 2115 nt2.2□□□□□ -2.06
YLR040CQ07988 PDR11YIL013C 4236 nt2.19□□□□□ -2.06
YLR040CQ07988 RAD34YDR314C 2079 nt2.19□□□□□ -2.06
YLR040CQ07988 SCD5YOR329C 2619 nt2.19□□□□□ -2.06
YLR040CQ07988 PIP2YOR363C 2991 nt2.19□□□□□ -2.06
YLR040CQ07988 SAS3YBL052C 2496 nt2.18□□□□□ -2.06
YLR040CQ07988 YFR016CYFR016C 3702 nt2.18□□□□□ -2.06
YLR040CQ07988 NOC3YLR002C 1992 nt2.18□□□□□ -2.06
YLR040CQ07988 AHC1YOR023C 1701 nt2.17□□□□□ -2.06
YLR040CQ07988 YDR341CYDR341C 1824 nt2.17□□□□□ -2.06
YLR040CQ07988 ZIP1YDR285W 2628 nt2.17□□□□□ -2.06
YLR040CQ07988 RPL31AYDL075W 342 nt2.17□□□□□ -2.06
YLR040CQ07988 YDL247W-AYDL247W-A 75 nt2.17□□□□□ -2.06
YLR040CQ07988 YER053C-AYER053C-A 114 nt2.17□□□□□ -2.06
YLR040CQ07988 YHR217CYHR217C 462 nt2.17□□□□□ -2.06
YLR040CQ07988 RPS17AYML024W 411 nt2.17□□□□□ -2.06
YLR040CQ07988 YOR108C-AYOR108C-A 210 nt2.17□□□□□ -2.06
YLR040CQ07988 MSB1YOR188W 3414 nt2.17□□□□□ -2.06
YLR040CQ07988 NUP100YKL068W 2880 nt2.16□□□□□ -2.06
YLR040CQ07988 NAM7YMR080C 2916 nt2.16□□□□□ -2.06
YLR040CQ07988 DCP2YNL118C 2913 nt2.16□□□□□ -2.06
YLR040CQ07988 YCR102W-AYCR102W-A 198 nt2.16□□□□□ -2.06
YLR040CQ07988 PMP2YEL017C-A 132 nt2.16□□□□□ -2.06
YLR040CQ07988 SMC6YLR383W 3345 nt2.16□□□□□ -2.06
YLR040CQ07988 PBY1YBR094W 2262 nt2.16□□□□□ -2.06
YLR040CQ07988 NOP14YDL148C 2433 nt2.16□□□□□ -2.06
YLR040CQ07988 SLN1YIL147C 3663 nt2.15□□□□□ -2.06
YLR040CQ07988 CAT2YML042W 2013 nt2.15□□□□□ -2.06
YLR040CQ07988 YOL098CYOL098C 3114 nt2.15□□□□□ -2.07
YLR040CQ07988 YPL044CYPL044C 549 nt2.15□□□□□ -2.07
YLR040CQ07988 MAD1YGL086W 2250 nt2.15□□□□□ -2.07
YLR040CQ07988 UBP15YMR304W 3693 nt2.14□□□□□ -2.07
YLR040CQ07988 YNL103W-AYNL103W-A 90 nt2.14□□□□□ -2.07
YLR040CQ07988 SBE22YHR103W 2559 nt2.14□□□□□ -2.07
YLR040CQ07988 UBP1YDL122W 2430 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms