Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 NOC3YLR002C 1992 nt1.36□□□□□ -2.19
RPN9Q04062 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
RPN9Q04062 snR72snR72 98 nt1.36□□□□□ -2.19
RPN9Q04062 YNL058CYNL058C 951 nt1.36□□□□□ -2.19
RPN9Q04062 YOR072W-AYOR072W-A 249 nt1.36□□□□□ -2.19
RPN9Q04062 IRA1YBR140C 9279 nt1.36□□□□□ -2.19
RPN9Q04062 SEC21YNL287W 2808 nt1.35□□□□□ -2.19
RPN9Q04062 TRM732YMR259C 4263 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
RPN9Q04062 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
RPN9Q04062 YJL135WYJL135W 318 nt1.35□□□□□ -2.19
RPN9Q04062 YMR175W-AYMR175W-A 195 nt1.35□□□□□ -2.19
RPN9Q04062 MSN5YDR335W 3675 nt1.35□□□□□ -2.19
RPN9Q04062 ENV11YGR071C 2583 nt1.35□□□□□ -2.19
RPN9Q04062 YLL054CYLL054C 2532 nt1.34□□□□□ -2.19
RPN9Q04062 AZF1YOR113W 2745 nt1.34□□□□□ -2.19
RPN9Q04062 APL2YKL135C 2181 nt1.34□□□□□ -2.19
RPN9Q04062 ATG31YDR022C 591 nt1.34□□□□□ -2.19
RPN9Q04062 ZIP2YGL249W 2115 nt1.33□□□□□ -2.2
RPN9Q04062 YCS4YLR272C 3531 nt1.33□□□□□ -2.2
RPN9Q04062 MSH3YCR092C 3057 nt1.33□□□□□ -2.2
RPN9Q04062 snR14snR14 160 nt1.33□□□□□ -2.2
RPN9Q04062 SCW11YGL028C 1629 nt1.33□□□□□ -2.2
RPN9Q04062 NUT1YGL151W 3399 nt1.33□□□□□ -2.2
RPN9Q04062 VPS54YDR027C 2670 nt1.33□□□□□ -2.2
RPN9Q04062 YLR334CYLR334C 381 nt1.32□□□□□ -2.2
RPN9Q04062 YMR242W-AYMR242W-A 90 nt1.32□□□□□ -2.2
RPN9Q04062 YPR012WYPR012W 255 nt1.32□□□□□ -2.2
RPN9Q04062 YSY6YBR162W-A 198 nt1.32□□□□□ -2.2
RPN9Q04062 YJR003CYJR003C 1560 nt1.32□□□□□ -2.2
RPN9Q04062 PBY1YBR094W 2262 nt1.32□□□□□ -2.2
RPN9Q04062 AHC1YOR023C 1701 nt1.32□□□□□ -2.2
RPN9Q04062 YDL211CYDL211C 1119 nt1.31□□□□□ -2.2
RPN9Q04062 YAR053WYAR053W 297 nt1.31□□□□□ -2.2
RPN9Q04062 YOR199WYOR199W 330 nt1.31□□□□□ -2.2
RPN9Q04062 INP2YMR163C 2118 nt1.3□□□□□ -2.2
RPN9Q04062 NPC2YDL046W 522 nt1.3□□□□□ -2.2
RPN9Q04062 CDC36YDL165W 576 nt1.3□□□□□ -2.2
RPN9Q04062 YGR035CYGR035C 351 nt1.3□□□□□ -2.2
RPN9Q04062 YOR161W-BYOR161W-B 261 nt1.3□□□□□ -2.2
RPN9Q04062 SPC98YNL126W 2541 nt1.3□□□□□ -2.2
RPN9Q04062 RPS20YHL015W 366 nt1.29□□□□□ -2.2
RPN9Q04062 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
RPN9Q04062 tW(UCA)QtW(UCA)Q 74 nt1.29□□□□□ -2.2
RPN9Q04062 NUP188YML103C 4968 nt1.29□□□□□ -2.2
RPN9Q04062 RRT15YLR162W-A 189 nt1.28□□□□□ -2.2
RPN9Q04062 YML007C-AYML007C-A 111 nt1.28□□□□□ -2.2
RPN9Q04062 RAD9YDR217C 3930 nt1.28□□□□□ -2.2
RPN9Q04062 MDS3YGL197W 4464 nt1.28□□□□□ -2.21
RPN9Q04062 RSM22YKL155C 1887 nt1.27□□□□□ -2.21
RPN9Q04062 CSN9YDR179C 489 nt1.27□□□□□ -2.21
RPN9Q04062 YDR426CYDR426C 378 nt1.27□□□□□ -2.21
RPN9Q04062 RPL38YLR325C 237 nt1.27□□□□□ -2.21
RPN9Q04062 YOL160WYOL160W 342 nt1.27□□□□□ -2.21
RPN9Q04062 YOR108C-AYOR108C-A 210 nt1.27□□□□□ -2.21
RPN9Q04062 YPL261CYPL261C 309 nt1.27□□□□□ -2.21
RPN9Q04062 SWI4YER111C 3282 nt1.27□□□□□ -2.21
RPN9Q04062 MAD1YGL086W 2250 nt1.27□□□□□ -2.21
RPN9Q04062 MPT5YGL178W 2580 nt1.26□□□□□ -2.21
RPN9Q04062 SPT21YMR179W 2277 nt1.26□□□□□ -2.21
RPN9Q04062 YAL063C-AYAL063C-A 291 nt1.26□□□□□ -2.21
RPN9Q04062 YLL020CYLL020C 306 nt1.26□□□□□ -2.21
RPN9Q04062 YOR029WYOR029W 336 nt1.26□□□□□ -2.21
RPN9Q04062 BIL1YOR304C-A 231 nt1.26□□□□□ -2.21
RPN9Q04062 YPR002C-AYPR002C-A 198 nt1.26□□□□□ -2.21
RPN9Q04062 YPR063CYPR063C 423 nt1.26□□□□□ -2.21
RPN9Q04062 SLI15YBR156C 2097 nt1.25□□□□□ -2.21
RPN9Q04062 YBR012CYBR012C 420 nt1.25□□□□□ -2.21
RPN9Q04062 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
RPN9Q04062 AIM44YPL158C 2277 nt1.25□□□□□ -2.21
RPN9Q04062 PIP2YOR363C 2991 nt1.25□□□□□ -2.21
RPN9Q04062 RIM20YOR275C 1986 nt1.25□□□□□ -2.21
RPN9Q04062 LCD1YDR499W 2244 nt1.24□□□□□ -2.21
RPN9Q04062 HMRA1YCR097W 381 nt1.24□□□□□ -2.21
RPN9Q04062 PCC1YKR095W-A 267 nt1.23□□□□□ -2.21
RPN9Q04062 YMR290W-AYMR290W-A 348 nt1.23□□□□□ -2.21
RPN9Q04062 FIG4YNL325C 2640 nt1.23□□□□□ -2.21
RPN9Q04062 COG4YPR105C 2586 nt1.23□□□□□ -2.21
RPN9Q04062 YGR130CYGR130C 2451 nt1.23□□□□□ -2.21
RPN9Q04062 RAD34YDR314C 2079 nt1.22□□□□□ -2.21
RPN9Q04062 YPR016W-AYPR016W-A 261 nt1.21□□□□□ -2.22
RPN9Q04062 APL3YBL037W 3078 nt1.2□□□□□ -2.22
RPN9Q04062 snR56snR56 88 nt1.2□□□□□ -2.22
RPN9Q04062 RPL35AYDL191W 363 nt1.2□□□□□ -2.22
RPN9Q04062 MAM33YIL070C 801 nt1.2□□□□□ -2.22
RPN9Q04062 SEC3YER008C 4011 nt1.2□□□□□ -2.22
RPN9Q04062 LAA1YJL207C 6045 nt1.2□□□□□ -2.22
RPN9Q04062 SLD3YGL113W 2007 nt1.19□□□□□ -2.22
RPN9Q04062 tV(UAC)BtV(UAC)B 74 nt1.19□□□□□ -2.22
RPN9Q04062 tV(UAC)DtV(UAC)D 74 nt1.19□□□□□ -2.22
RPN9Q04062 PKH2YOL100W 3246 nt1.19□□□□□ -2.22
RPN9Q04062 YBR221W-AYBR221W-A 105 nt1.19□□□□□ -2.22
RPN9Q04062 EAF1YDR359C 2949 nt1.18□□□□□ -2.22
RPN9Q04062 NUP145YGL092W 3954 nt1.18□□□□□ -2.22
RPN9Q04062 GIM4YEL003W 336 nt1.18□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 211.5 ms