Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 MUK1YPL070W 1839 nt1.43□□□□□ -2.18
RPT4P53549 SIP4YJL089W 2490 nt1.42□□□□□ -2.18
RPT4P53549 YHL041WYHL041W 450 nt1.42□□□□□ -2.18
RPT4P53549 tV(UAC)BtV(UAC)B 74 nt1.42□□□□□ -2.18
RPT4P53549 tV(UAC)DtV(UAC)D 74 nt1.42□□□□□ -2.18
RPT4P53549 RPB10YOR210W 213 nt1.42□□□□□ -2.18
RPT4P53549 YER137W-AYER137W-A 306 nt1.41□□□□□ -2.18
RPT4P53549 YJL015CYJL015C 285 nt1.41□□□□□ -2.18
RPT4P53549 YAL068W-AYAL068W-A 255 nt1.41□□□□□ -2.18
RPT4P53549 YOR293C-AYOR293C-A 150 nt1.41□□□□□ -2.18
RPT4P53549 NUT2YPR168W 474 nt1.41□□□□□ -2.18
RPT4P53549 ENV11YGR071C 2583 nt1.4□□□□□ -2.19
RPT4P53549 NOC3YLR002C 1992 nt1.4□□□□□ -2.19
RPT4P53549 SGO1YOR073W 1773 nt1.4□□□□□ -2.19
RPT4P53549 SDH2YLL041C 801 nt1.4□□□□□ -2.19
RPT4P53549 RPL33BYOR234C 324 nt1.4□□□□□ -2.19
RPT4P53549 SLX4YLR135W 2247 nt1.39□□□□□ -2.19
RPT4P53549 EST2YLR318W 2655 nt1.39□□□□□ -2.19
RPT4P53549 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
RPT4P53549 YDR182W-AYDR182W-A 204 nt1.39□□□□□ -2.19
RPT4P53549 YOR029WYOR029W 336 nt1.39□□□□□ -2.19
RPT4P53549 RPS30BYOR182C 192 nt1.39□□□□□ -2.19
RPT4P53549 OST1YJL002C 1431 nt1.39□□□□□ -2.19
RPT4P53549 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
RPT4P53549 YMR175W-AYMR175W-A 195 nt1.38□□□□□ -2.19
RPT4P53549 YLL054CYLL054C 2532 nt1.38□□□□□ -2.19
RPT4P53549 YAR009CYAR009C 3591 nt1.38□□□□□ -2.19
RPT4P53549 SPO75YLL005C 2607 nt1.37□□□□□ -2.19
RPT4P53549 PET127YOR017W 2403 nt1.37□□□□□ -2.19
RPT4P53549 snR51snR51 107 nt1.37□□□□□ -2.19
RPT4P53549 VPS54YDR027C 2670 nt1.37□□□□□ -2.19
RPT4P53549 AZF1YOR113W 2745 nt1.36□□□□□ -2.19
RPT4P53549 YCS4YLR272C 3531 nt1.36□□□□□ -2.19
RPT4P53549 YNL058CYNL058C 951 nt1.36□□□□□ -2.19
RPT4P53549 IRC23YOR044W 474 nt1.36□□□□□ -2.19
RPT4P53549 YOR121CYOR121C 306 nt1.36□□□□□ -2.19
RPT4P53549 snR72snR72 98 nt1.35□□□□□ -2.19
RPT4P53549 MSN5YDR335W 3675 nt1.35□□□□□ -2.19
RPT4P53549 ZIP2YGL249W 2115 nt1.34□□□□□ -2.19
RPT4P53549 SCW11YGL028C 1629 nt1.34□□□□□ -2.19
RPT4P53549 NUT1YGL151W 3399 nt1.34□□□□□ -2.19
RPT4P53549 PAU12YGR294W 363 nt1.34□□□□□ -2.19
RPT4P53549 YOR072W-AYOR072W-A 249 nt1.34□□□□□ -2.19
RPT4P53549 snR14snR14 160 nt1.34□□□□□ -2.19
RPT4P53549 PAU24YBR301W 363 nt1.34□□□□□ -2.19
RPT4P53549 SEC21YNL287W 2808 nt1.33□□□□□ -2.2
RPT4P53549 YDL211CYDL211C 1119 nt1.33□□□□□ -2.2
RPT4P53549 YMR242W-AYMR242W-A 90 nt1.33□□□□□ -2.2
RPT4P53549 NPC2YDL046W 522 nt1.32□□□□□ -2.2
RPT4P53549 YDR118W-AYDR118W-A 117 nt1.32□□□□□ -2.2
RPT4P53549 YJL135WYJL135W 318 nt1.32□□□□□ -2.2
RPT4P53549 YOR161W-BYOR161W-B 261 nt1.32□□□□□ -2.2
RPT4P53549 YOR199WYOR199W 330 nt1.32□□□□□ -2.2
RPT4P53549 YSY6YBR162W-A 198 nt1.32□□□□□ -2.2
RPT4P53549 NUP188YML103C 4968 nt1.31□□□□□ -2.2
RPT4P53549 YOR108C-AYOR108C-A 210 nt1.31□□□□□ -2.2
RPT4P53549 INP2YMR163C 2118 nt1.31□□□□□ -2.2
RPT4P53549 COG4YPR105C 2586 nt1.31□□□□□ -2.2
RPT4P53549 SPT21YMR179W 2277 nt1.3□□□□□ -2.2
RPT4P53549 INA22YIR024C 651 nt1.3□□□□□ -2.2
RPT4P53549 YJR003CYJR003C 1560 nt1.3□□□□□ -2.2
RPT4P53549 MAD1YGL086W 2250 nt1.29□□□□□ -2.2
RPT4P53549 MPT5YGL178W 2580 nt1.29□□□□□ -2.2
RPT4P53549 ATG31YDR022C 591 nt1.29□□□□□ -2.2
RPT4P53549 YLL020CYLL020C 306 nt1.29□□□□□ -2.2
RPT4P53549 RPL38YLR325C 237 nt1.29□□□□□ -2.2
RPT4P53549 YPR170W-AYPR170W-A 186 nt1.29□□□□□ -2.2
RPT4P53549 SLI15YBR156C 2097 nt1.28□□□□□ -2.2
RPT4P53549 AIM44YPL158C 2277 nt1.28□□□□□ -2.2
RPT4P53549 RPS20YHL015W 366 nt1.28□□□□□ -2.2
RPT4P53549 RRT15YLR162W-A 189 nt1.28□□□□□ -2.2
RPT4P53549 YML007C-AYML007C-A 111 nt1.28□□□□□ -2.2
RPT4P53549 YPL261CYPL261C 309 nt1.28□□□□□ -2.2
RPT4P53549 SWI4YER111C 3282 nt1.27□□□□□ -2.21
RPT4P53549 AHC1YOR023C 1701 nt1.27□□□□□ -2.21
RPT4P53549 YGR035CYGR035C 351 nt1.27□□□□□ -2.21
RPT4P53549 YAR053WYAR053W 297 nt1.27□□□□□ -2.21
RPT4P53549 YOL160WYOL160W 342 nt1.27□□□□□ -2.21
RPT4P53549 MDS3YGL197W 4464 nt1.27□□□□□ -2.21
RPT4P53549 YMR290W-AYMR290W-A 348 nt1.26□□□□□ -2.21
RPT4P53549 RIM20YOR275C 1986 nt1.26□□□□□ -2.21
RPT4P53549 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
RPT4P53549 LCD1YDR499W 2244 nt1.25□□□□□ -2.21
RPT4P53549 YDR426CYDR426C 378 nt1.25□□□□□ -2.21
RPT4P53549 YPR002C-AYPR002C-A 198 nt1.25□□□□□ -2.21
RPT4P53549 YPR012WYPR012W 255 nt1.25□□□□□ -2.21
RPT4P53549 YPR063CYPR063C 423 nt1.25□□□□□ -2.21
RPT4P53549 PBY1YBR094W 2262 nt1.24□□□□□ -2.21
RPT4P53549 ROM2YLR371W 4071 nt1.24□□□□□ -2.21
RPT4P53549 YAL063C-AYAL063C-A 291 nt1.24□□□□□ -2.21
RPT4P53549 PCC1YKR095W-A 267 nt1.24□□□□□ -2.21
RPT4P53549 YLR334CYLR334C 381 nt1.24□□□□□ -2.21
RPT4P53549 FIG4YNL325C 2640 nt1.24□□□□□ -2.21
RPT4P53549 CDC36YDL165W 576 nt1.23□□□□□ -2.21
RPT4P53549 CSN9YDR179C 489 nt1.23□□□□□ -2.21
RPT4P53549 QCR9YGR183C 201 nt1.23□□□□□ -2.21
RPT4P53549 tW(UCA)QtW(UCA)Q 74 nt1.23□□□□□ -2.21
RPT4P53549 CLU1YMR012W 3834 nt1.23□□□□□ -2.21
RPT4P53549 RAD34YDR314C 2079 nt1.22□□□□□ -2.21
RPT4P53549 YIL020C-AYIL020C-A 339 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms