Protein–RNA interactions for Protein: P53117

RRT6, Regulator of rDNA transcription protein 6, yeastyeast

Predicted RBP Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRT6P53117 YDR169C-AYDR169C-A 150 nt1.78□□□□□ -2.12
RRT6P53117 SEC5YDR166C 2916 nt1.77□□□□□ -2.13
RRT6P53117 SRP14YDL092W 441 nt1.77□□□□□ -2.13
RRT6P53117 YDR102CYDR102C 333 nt1.77□□□□□ -2.13
RRT6P53117 YHR007C-AYHR007C-A 216 nt1.77□□□□□ -2.13
RRT6P53117 SKI3YPR189W 4299 nt1.77□□□□□ -2.13
RRT6P53117 ZIP2YGL249W 2115 nt1.76□□□□□ -2.13
RRT6P53117 PIG1YLR273C 1947 nt1.76□□□□□ -2.13
RRT6P53117 RTP1YMR185W 2946 nt1.76□□□□□ -2.13
RRT6P53117 YIL102CYIL102C 306 nt1.76□□□□□ -2.13
RRT6P53117 TAR1YLR154W-C 375 nt1.76□□□□□ -2.13
RRT6P53117 snR36snR36 182 nt1.76□□□□□ -2.13
RRT6P53117 PKH3YDR466W 2697 nt1.76□□□□□ -2.13
RRT6P53117 IML1YJR138W 4755 nt1.75□□□□□ -2.13
RRT6P53117 PIK1YNL267W 3201 nt1.75□□□□□ -2.13
RRT6P53117 NPC2YDL046W 522 nt1.75□□□□□ -2.13
RRT6P53117 RPL35AYDL191W 363 nt1.75□□□□□ -2.13
RRT6P53117 CSN9YDR179C 489 nt1.75□□□□□ -2.13
RRT6P53117 RPL39YJL189W 156 nt1.75□□□□□ -2.13
RRT6P53117 EMC5YIL027C 426 nt1.74□□□□□ -2.13
RRT6P53117 PFD1YJL179W 330 nt1.74□□□□□ -2.13
RRT6P53117 YMR141W-AYMR141W-A 225 nt1.74□□□□□ -2.13
RRT6P53117 YMR242W-AYMR242W-A 90 nt1.74□□□□□ -2.13
RRT6P53117 YMR290W-AYMR290W-A 348 nt1.74□□□□□ -2.13
RRT6P53117 NOC3YLR002C 1992 nt1.74□□□□□ -2.13
RRT6P53117 YOL160WYOL160W 342 nt1.73□□□□□ -2.13
RRT6P53117 YPL225WYPL225W 441 nt1.73□□□□□ -2.13
RRT6P53117 YOR199WYOR199W 330 nt1.72□□□□□ -2.13
RRT6P53117 GCN2YDR283C 4980 nt1.72□□□□□ -2.13
RRT6P53117 AI5_ALPHAQ0070 1893 nt1.71□□□□□ -2.14
RRT6P53117 YOR019WYOR019W 2193 nt1.71□□□□□ -2.14
RRT6P53117 YDR183C-AYDR183C-A 258 nt1.71□□□□□ -2.14
RRT6P53117 YDR413CYDR413C 576 nt1.71□□□□□ -2.14
RRT6P53117 YNL146WYNL146W 303 nt1.71□□□□□ -2.14
RRT6P53117 YLL054CYLL054C 2532 nt1.71□□□□□ -2.14
RRT6P53117 YDR048CYDR048C 315 nt1.7□□□□□ -2.14
RRT6P53117 YGL149WYGL149W 306 nt1.7□□□□□ -2.14
RRT6P53117 snR72snR72 98 nt1.69□□□□□ -2.14
RRT6P53117 YAR029WYAR029W 225 nt1.69□□□□□ -2.14
RRT6P53117 YMR031W-AYMR031W-A 327 nt1.69□□□□□ -2.14
RRT6P53117 YMR247W-AYMR247W-A 144 nt1.69□□□□□ -2.14
RRT6P53117 AIM44YPL158C 2277 nt1.68□□□□□ -2.14
RRT6P53117 MVP1YMR004W 1536 nt1.68□□□□□ -2.14
RRT6P53117 NHP2YDL208W 471 nt1.68□□□□□ -2.14
RRT6P53117 YFL032WYFL032W 321 nt1.68□□□□□ -2.14
RRT6P53117 MAM33YIL070C 801 nt1.68□□□□□ -2.14
RRT6P53117 YIR044CYIR044C 186 nt1.68□□□□□ -2.14
RRT6P53117 SPO24YPR036W-A 204 nt1.68□□□□□ -2.14
RRT6P53117 RAD50YNL250W 3939 nt1.68□□□□□ -2.14
RRT6P53117 ENV11YGR071C 2583 nt1.68□□□□□ -2.14
RRT6P53117 UFD2YDL190C 2886 nt1.68□□□□□ -2.14
RRT6P53117 MAD1YGL086W 2250 nt1.68□□□□□ -2.14
RRT6P53117 NCA2YPR155C 1851 nt1.67□□□□□ -2.14
RRT6P53117 ADR1YDR216W 3972 nt1.67□□□□□ -2.14
RRT6P53117 YDL211CYDL211C 1119 nt1.67□□□□□ -2.14
RRT6P53117 YJL135WYJL135W 318 nt1.67□□□□□ -2.14
RRT6P53117 VPS54YDR027C 2670 nt1.66□□□□□ -2.14
RRT6P53117 TTI1YKL033W 3117 nt1.66□□□□□ -2.14
RRT6P53117 RPL31AYDL075W 342 nt1.66□□□□□ -2.14
RRT6P53117 YMR175W-AYMR175W-A 195 nt1.66□□□□□ -2.14
RRT6P53117 CUL3YGR003W 2235 nt1.66□□□□□ -2.14
RRT6P53117 BST1YFL025C 3090 nt1.65□□□□□ -2.14
RRT6P53117 YLR140WYLR140W 327 nt1.65□□□□□ -2.15
RRT6P53117 YOR376WYOR376W 369 nt1.65□□□□□ -2.15
RRT6P53117 YAR009CYAR009C 3591 nt1.64□□□□□ -2.15
RRT6P53117 SLI15YBR156C 2097 nt1.64□□□□□ -2.15
RRT6P53117 YDR182W-AYDR182W-A 204 nt1.64□□□□□ -2.15
RRT6P53117 YER097WYER097W 330 nt1.64□□□□□ -2.15
RRT6P53117 SCW11YGL028C 1629 nt1.64□□□□□ -2.15
RRT6P53117 OST1YJL002C 1431 nt1.64□□□□□ -2.15
RRT6P53117 STE5YDR103W 2754 nt1.64□□□□□ -2.15
RRT6P53117 TBS1YBR150C 3285 nt1.63□□□□□ -2.15
RRT6P53117 HTL1YCR020W-B 237 nt1.63□□□□□ -2.15
RRT6P53117 COF1YLL050C 432 nt1.63□□□□□ -2.15
RRT6P53117 YMR230W-AYMR230W-A 189 nt1.63□□□□□ -2.15
RRT6P53117 RAD34YDR314C 2079 nt1.63□□□□□ -2.15
RRT6P53117 YFL063WYFL063W 456 nt1.62□□□□□ -2.15
RRT6P53117 tT(UGU)HtT(UGU)H 72 nt1.62□□□□□ -2.15
RRT6P53117 RPS30BYOR182C 192 nt1.62□□□□□ -2.15
RRT6P53117 PTP2YOR208W 2253 nt1.62□□□□□ -2.15
RRT6P53117 YJL022WYJL022W 309 nt1.61□□□□□ -2.15
RRT6P53117 NUP145YGL092W 3954 nt1.61□□□□□ -2.15
RRT6P53117 YNL284C-BYNL284C-B 5268 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)E1tH(GUG)E1 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)E2tH(GUG)E2 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)G1tH(GUG)G1 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)G2tH(GUG)G2 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)HtH(GUG)H 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)KtH(GUG)K 72 nt1.6□□□□□ -2.15
RRT6P53117 tH(GUG)MtH(GUG)M 72 nt1.6□□□□□ -2.15
RRT6P53117 YOR161W-BYOR161W-B 261 nt1.6□□□□□ -2.15
RRT6P53117 SLX4YLR135W 2247 nt1.6□□□□□ -2.15
RRT6P53117 SMC4YLR086W 4257 nt1.6□□□□□ -2.15
RRT6P53117 NUT1YGL151W 3399 nt1.6□□□□□ -2.15
RRT6P53117 DBP6YNR038W 1890 nt1.6□□□□□ -2.15
RRT6P53117 HMRA2YCR096C 360 nt1.59□□□□□ -2.15
RRT6P53117 YGL217CYGL217C 342 nt1.59□□□□□ -2.15
RRT6P53117 YPR063CYPR063C 423 nt1.59□□□□□ -2.15
RRT6P53117 NIP100YPL174C 2607 nt1.59□□□□□ -2.16
RRT6P53117 KCS1YDR017C 3153 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms