Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
OTU1P43558 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
OTU1P43558 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
OTU1P43558 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
OTU1P43558 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
OTU1P43558 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
OTU1P43558 YAR009CYAR009C 3591 nt0.56□□□□□ -2.32
OTU1P43558 ZIP2YGL249W 2115 nt0.56□□□□□ -2.32
OTU1P43558 YER023C-AYER023C-A 213 nt0.55□□□□□ -2.32
OTU1P43558 YGR042WYGR042W 816 nt0.55□□□□□ -2.32
OTU1P43558 PHS1YJL097W 654 nt0.55□□□□□ -2.32
OTU1P43558 YML002WYML002W 2214 nt0.54□□□□□ -2.32
OTU1P43558 YJR003CYJR003C 1560 nt0.54□□□□□ -2.32
OTU1P43558 PAN2YGL094C 3348 nt0.54□□□□□ -2.32
OTU1P43558 GPG1YGL121C 381 nt0.54□□□□□ -2.32
OTU1P43558 RPL9AYGL147C 576 nt0.54□□□□□ -2.32
OTU1P43558 HUR1YGL168W 333 nt0.54□□□□□ -2.32
OTU1P43558 YOR108C-AYOR108C-A 210 nt0.54□□□□□ -2.32
OTU1P43558 YOR282WYOR282W 321 nt0.54□□□□□ -2.32
OTU1P43558 EFR3YMR212C 2349 nt0.54□□□□□ -2.32
OTU1P43558 GEA2YEL022W 4380 nt0.54□□□□□ -2.32
OTU1P43558 YGR025WYGR025W 303 nt0.53□□□□□ -2.32
OTU1P43558 snR13snR13 124 nt0.53□□□□□ -2.32
OTU1P43558 UBP3YER151C 2739 nt0.53□□□□□ -2.32
OTU1P43558 YIL142C-AYIL142C-A 333 nt0.52□□□□□ -2.33
OTU1P43558 PAC1YOR269W 1485 nt0.52□□□□□ -2.33
OTU1P43558 YDL016CYDL016C 303 nt0.51□□□□□ -2.33
OTU1P43558 YER135CYER135C 393 nt0.51□□□□□ -2.33
OTU1P43558 YJR141WYJR141W 1044 nt0.51□□□□□ -2.33
OTU1P43558 RPS27AYKL156W 249 nt0.51□□□□□ -2.33
OTU1P43558 PRP16YKR086W 3216 nt0.51□□□□□ -2.33
OTU1P43558 YMR290W-AYMR290W-A 348 nt0.5□□□□□ -2.33
OTU1P43558 TSC3YBR058C-A 243 nt0.5□□□□□ -2.33
OTU1P43558 BFR2YDR299W 1605 nt0.49□□□□□ -2.33
OTU1P43558 PRE4YFR050C 801 nt0.49□□□□□ -2.33
OTU1P43558 LOA1YPR139C 903 nt0.48□□□□□ -2.33
OTU1P43558 HMLALPHA2YCL067C 633 nt0.47□□□□□ -2.33
OTU1P43558 MATALPHA2YCR039C 633 nt0.47□□□□□ -2.33
OTU1P43558 YHL042WYHL042W 453 nt0.47□□□□□ -2.33
OTU1P43558 YPL182CYPL182C 384 nt0.47□□□□□ -2.33
OTU1P43558 PKH2YOL100W 3246 nt0.47□□□□□ -2.33
OTU1P43558 YDR029WYDR029W 315 nt0.46□□□□□ -2.34
OTU1P43558 URM1YIL008W 300 nt0.46□□□□□ -2.34
OTU1P43558 YIL066W-AYIL066W-A 444 nt0.46□□□□□ -2.34
OTU1P43558 YJL135WYJL135W 318 nt0.46□□□□□ -2.34
OTU1P43558 LTE1YAL024C 4308 nt0.46□□□□□ -2.34
OTU1P43558 UBX4YMR067C 1251 nt0.45□□□□□ -2.34
OTU1P43558 RPB10YOR210W 213 nt0.45□□□□□ -2.34
OTU1P43558 SNU56YDR240C 1479 nt0.45□□□□□ -2.34
OTU1P43558 MYO1YHR023W 5787 nt0.44□□□□□ -2.34
OTU1P43558 NPR2YEL062W 1848 nt0.44□□□□□ -2.34
OTU1P43558 PMP1YCR024C-A 123 nt0.44□□□□□ -2.34
OTU1P43558 YKL202WYKL202W 582 nt0.43□□□□□ -2.34
OTU1P43558 YOR029WYOR029W 336 nt0.43□□□□□ -2.34
OTU1P43558 CHS6YJL099W 2241 nt0.43□□□□□ -2.34
OTU1P43558 NOP9YJL010C 2001 nt0.42□□□□□ -2.34
OTU1P43558 YER087C-AYER087C-A 552 nt0.42□□□□□ -2.34
OTU1P43558 INA22YIR024C 651 nt0.42□□□□□ -2.34
OTU1P43558 RPL26AYLR344W 384 nt0.41□□□□□ -2.34
OTU1P43558 CDC33YOL139C 642 nt0.4□□□□□ -2.35
OTU1P43558 YOL160WYOL160W 342 nt0.4□□□□□ -2.35
OTU1P43558 YDR344CYDR344C 444 nt0.39□□□□□ -2.35
OTU1P43558 TIM13YGR181W 318 nt0.39□□□□□ -2.35
OTU1P43558 BIG1YHR101C 1008 nt0.39□□□□□ -2.35
OTU1P43558 YOR072W-AYOR072W-A 249 nt0.39□□□□□ -2.35
OTU1P43558 YOR218CYOR218C 420 nt0.39□□□□□ -2.35
OTU1P43558 YPL261CYPL261C 309 nt0.39□□□□□ -2.35
OTU1P43558 YMR160WYMR160W 2451 nt0.39□□□□□ -2.35
OTU1P43558 OST1YJL002C 1431 nt0.38□□□□□ -2.35
OTU1P43558 YMR141W-AYMR141W-A 225 nt0.38□□□□□ -2.35
OTU1P43558 YIL134C-AYIL134C-A 204 nt0.37□□□□□ -2.35
OTU1P43558 CUL3YGR003W 2235 nt0.36□□□□□ -2.35
OTU1P43558 YEL030C-AYEL030C-A 315 nt0.36□□□□□ -2.35
OTU1P43558 RPS24BYIL069C 408 nt0.36□□□□□ -2.35
OTU1P43558 YBR076C-AYBR076C-A 267 nt0.36□□□□□ -2.35
OTU1P43558 RAD34YDR314C 2079 nt0.36□□□□□ -2.35
OTU1P43558 YCR001WYCR001W 315 nt0.35□□□□□ -2.35
OTU1P43558 YFL012WYFL012W 447 nt0.35□□□□□ -2.35
OTU1P43558 RPL26BYGR034W 384 nt0.35□□□□□ -2.35
OTU1P43558 YIR044CYIR044C 186 nt0.35□□□□□ -2.35
OTU1P43558 UBC7YMR022W 498 nt0.35□□□□□ -2.35
OTU1P43558 YPL044CYPL044C 549 nt0.35□□□□□ -2.35
OTU1P43558 YCK3YER123W 1575 nt0.33□□□□□ -2.36
OTU1P43558 snR72snR72 98 nt0.33□□□□□ -2.36
OTU1P43558 BSC3YLR465C 309 nt0.32□□□□□ -2.36
OTU1P43558 GPI15YNL038W 690 nt0.32□□□□□ -2.36
OTU1P43558 YNL319WYNL319W 441 nt0.32□□□□□ -2.36
OTU1P43558 NFU1YKL040C 771 nt0.31□□□□□ -2.36
OTU1P43558 snR51snR51 107 nt0.31□□□□□ -2.36
OTU1P43558 YSP1YHR155W 3687 nt0.31□□□□□ -2.36
OTU1P43558 YLR269CYLR269C 351 nt0.3□□□□□ -2.36
OTU1P43558 PBI2YNL015W 228 nt0.3□□□□□ -2.36
OTU1P43558 SBH1YER087C-B 249 nt0.29□□□□□ -2.36
OTU1P43558 YKL123WYKL123W 381 nt0.29□□□□□ -2.36
OTU1P43558 YBL008W-AYBL008W-A 240 nt0.29□□□□□ -2.36
OTU1P43558 ABF2YMR072W 552 nt0.29□□□□□ -2.36
OTU1P43558 YPL185WYPL185W 396 nt0.29□□□□□ -2.36
OTU1P43558 FMP27YLR454W 7887 nt0.28□□□□□ -2.36
OTU1P43558 EMC4YGL231C 573 nt0.28□□□□□ -2.36
OTU1P43558 RPS30BYOR182C 192 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 59.4 ms