Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 AI1Q0050 2505 nt0.73□□□□□ -2.29
RTR1P40084 TRS65YGR166W 1683 nt0.72□□□□□ -2.29
RTR1P40084 YIL059CYIL059C 366 nt0.72□□□□□ -2.29
RTR1P40084 YOR218CYOR218C 420 nt0.72□□□□□ -2.29
RTR1P40084 LCD1YDR499W 2244 nt0.71□□□□□ -2.3
RTR1P40084 VMA21YGR105W 234 nt0.71□□□□□ -2.3
RTR1P40084 YIL029CYIL029C 429 nt0.71□□□□□ -2.3
RTR1P40084 PRP21YJL203W 843 nt0.71□□□□□ -2.3
RTR1P40084 ENV11YGR071C 2583 nt0.71□□□□□ -2.3
RTR1P40084 YDL196WYDL196W 330 nt0.7□□□□□ -2.3
RTR1P40084 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
RTR1P40084 YLL032CYLL032C 2478 nt0.69□□□□□ -2.3
RTR1P40084 YDR182W-AYDR182W-A 204 nt0.69□□□□□ -2.3
RTR1P40084 ILM1YJR118C 612 nt0.69□□□□□ -2.3
RTR1P40084 YKL023C-AYKL023C-A 228 nt0.69□□□□□ -2.3
RTR1P40084 YLR285C-AYLR285C-A 171 nt0.69□□□□□ -2.3
RTR1P40084 RRT1YBL048W 312 nt0.69□□□□□ -2.3
RTR1P40084 YPR039WYPR039W 336 nt0.69□□□□□ -2.3
RTR1P40084 SLD3YGL113W 2007 nt0.67□□□□□ -2.3
RTR1P40084 OCA6YDR067C 675 nt0.67□□□□□ -2.3
RTR1P40084 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
RTR1P40084 RFX1YLR176C 2436 nt0.67□□□□□ -2.3
RTR1P40084 Q0255Q0255 1419 nt0.66□□□□□ -2.3
RTR1P40084 PKH2YOL100W 3246 nt0.66□□□□□ -2.3
RTR1P40084 MRPL31YKL138C 396 nt0.66□□□□□ -2.3
RTR1P40084 YMR031W-AYMR031W-A 327 nt0.66□□□□□ -2.3
RTR1P40084 YPR153WYPR153W 423 nt0.66□□□□□ -2.3
RTR1P40084 SLI15YBR156C 2097 nt0.65□□□□□ -2.31
RTR1P40084 SWF1YDR126W 1011 nt0.65□□□□□ -2.31
RTR1P40084 ALG13YGL047W 609 nt0.65□□□□□ -2.31
RTR1P40084 APQ13YJL075C 417 nt0.65□□□□□ -2.31
RTR1P40084 RCN2YOR220W 798 nt0.65□□□□□ -2.31
RTR1P40084 WAR1YML076C 2835 nt0.65□□□□□ -2.31
RTR1P40084 BUL2YML111W 2763 nt0.65□□□□□ -2.31
RTR1P40084 YOR192C-BYOR192C-B 5313 nt0.64□□□□□ -2.31
RTR1P40084 UTP8YGR128C 2142 nt0.64□□□□□ -2.31
RTR1P40084 THO2YNL139C 4794 nt0.64□□□□□ -2.31
RTR1P40084 YER076W-AYER076W-A 348 nt0.64□□□□□ -2.31
RTR1P40084 YNL050CYNL050C 813 nt0.64□□□□□ -2.31
RTR1P40084 IES4YOR189W 351 nt0.64□□□□□ -2.31
RTR1P40084 RKR1YMR247C 4689 nt0.63□□□□□ -2.31
RTR1P40084 DBP6YNR038W 1890 nt0.63□□□□□ -2.31
RTR1P40084 ISD11YER048W-A 285 nt0.63□□□□□ -2.31
RTR1P40084 YHR139C-AYHR139C-A 312 nt0.63□□□□□ -2.31
RTR1P40084 IRC16YPR038W 360 nt0.63□□□□□ -2.31
RTR1P40084 NPC2YDL046W 522 nt0.62□□□□□ -2.31
RTR1P40084 MET32YDR253C 576 nt0.62□□□□□ -2.31
RTR1P40084 YKL044WYKL044W 321 nt0.62□□□□□ -2.31
RTR1P40084 YGL239CYGL239C 315 nt0.61□□□□□ -2.31
RTR1P40084 RPL32YBL092W 393 nt0.61□□□□□ -2.31
RTR1P40084 YDR269CYDR269C 324 nt0.6□□□□□ -2.31
RTR1P40084 YFR009W-AYFR009W-A 258 nt0.6□□□□□ -2.31
RTR1P40084 STE5YDR103W 2754 nt0.59□□□□□ -2.31
RTR1P40084 ECM12YHR021W-A 456 nt0.59□□□□□ -2.31
RTR1P40084 RPL38YLR325C 237 nt0.59□□□□□ -2.31
RTR1P40084 BER1YLR412W 825 nt0.59□□□□□ -2.31
RTR1P40084 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
RTR1P40084 YLL007CYLL007C 1998 nt0.58□□□□□ -2.32
RTR1P40084 YHR063W-AYHR063W-A 336 nt0.58□□□□□ -2.32
RTR1P40084 YKL068W-AYKL068W-A 237 nt0.58□□□□□ -2.32
RTR1P40084 YOR108C-AYOR108C-A 210 nt0.57□□□□□ -2.32
RTR1P40084 snR13snR13 124 nt0.57□□□□□ -2.32
RTR1P40084 ZIP2YGL249W 2115 nt0.56□□□□□ -2.32
RTR1P40084 YOR282WYOR282W 321 nt0.56□□□□□ -2.32
RTR1P40084 RPL9AYGL147C 576 nt0.55□□□□□ -2.32
RTR1P40084 HUR1YGL168W 333 nt0.55□□□□□ -2.32
RTR1P40084 YGR042WYGR042W 816 nt0.55□□□□□ -2.32
RTR1P40084 UBX4YMR067C 1251 nt0.55□□□□□ -2.32
RTR1P40084 YML002WYML002W 2214 nt0.54□□□□□ -2.32
RTR1P40084 GPG1YGL121C 381 nt0.54□□□□□ -2.32
RTR1P40084 EFR3YMR212C 2349 nt0.54□□□□□ -2.32
RTR1P40084 YDL016CYDL016C 303 nt0.53□□□□□ -2.32
RTR1P40084 YGR025WYGR025W 303 nt0.53□□□□□ -2.32
RTR1P40084 YHL042WYHL042W 453 nt0.53□□□□□ -2.32
RTR1P40084 YMR290W-AYMR290W-A 348 nt0.53□□□□□ -2.32
RTR1P40084 LOA1YPR139C 903 nt0.52□□□□□ -2.33
RTR1P40084 YER135CYER135C 393 nt0.51□□□□□ -2.33
RTR1P40084 YJR141WYJR141W 1044 nt0.51□□□□□ -2.33
RTR1P40084 YPL182CYPL182C 384 nt0.51□□□□□ -2.33
RTR1P40084 RPS27AYKL156W 249 nt0.49□□□□□ -2.33
RTR1P40084 TSC3YBR058C-A 243 nt0.49□□□□□ -2.33
RTR1P40084 BFR2YDR299W 1605 nt0.49□□□□□ -2.33
RTR1P40084 HMLALPHA2YCL067C 633 nt0.48□□□□□ -2.33
RTR1P40084 MATALPHA2YCR039C 633 nt0.48□□□□□ -2.33
RTR1P40084 YJL135WYJL135W 318 nt0.48□□□□□ -2.33
RTR1P40084 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
RTR1P40084 PMP1YCR024C-A 123 nt0.47□□□□□ -2.33
RTR1P40084 YDR029WYDR029W 315 nt0.47□□□□□ -2.33
RTR1P40084 YER078W-AYER078W-A 165 nt0.47□□□□□ -2.33
RTR1P40084 YKL202WYKL202W 582 nt0.47□□□□□ -2.33
RTR1P40084 YIL066W-AYIL066W-A 444 nt0.46□□□□□ -2.34
RTR1P40084 MYO1YHR023W 5787 nt0.46□□□□□ -2.34
RTR1P40084 RPL26AYLR344W 384 nt0.45□□□□□ -2.34
RTR1P40084 NOP9YJL010C 2001 nt0.44□□□□□ -2.34
RTR1P40084 NPR2YEL062W 1848 nt0.43□□□□□ -2.34
RTR1P40084 SNU56YDR240C 1479 nt0.43□□□□□ -2.34
RTR1P40084 YGR290WYGR290W 444 nt0.43□□□□□ -2.34
RTR1P40084 YOL160WYOL160W 342 nt0.43□□□□□ -2.34
RTR1P40084 YPL261CYPL261C 309 nt0.43□□□□□ -2.34
RTR1P40084 CHS6YJL099W 2241 nt0.43□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 73 ms