Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YPL185WYPL185W 396 nt0.95□□□□□ -2.26
LSM4P40070 SWI5YDR146C 2130 nt0.95□□□□□ -2.26
LSM4P40070 YDL211CYDL211C 1119 nt0.94□□□□□ -2.26
LSM4P40070 YKL202WYKL202W 582 nt0.94□□□□□ -2.26
LSM4P40070 YLR434CYLR434C 384 nt0.94□□□□□ -2.26
LSM4P40070 LEE1YPL054W 906 nt0.94□□□□□ -2.26
LSM4P40070 PXA2YKL188C 2562 nt0.94□□□□□ -2.26
LSM4P40070 NST1YNL091W 3723 nt0.93□□□□□ -2.26
LSM4P40070 SPO23YBR250W 1572 nt0.93□□□□□ -2.26
LSM4P40070 YDR003W-AYDR003W-A 123 nt0.93□□□□□ -2.26
LSM4P40070 SWF1YDR126W 1011 nt0.93□□□□□ -2.26
LSM4P40070 TIM13YGR181W 318 nt0.93□□□□□ -2.26
LSM4P40070 YHR138CYHR138C 345 nt0.93□□□□□ -2.26
LSM4P40070 YLR146W-AYLR146W-A 189 nt0.93□□□□□ -2.26
LSM4P40070 YDR269CYDR269C 324 nt0.92□□□□□ -2.26
LSM4P40070 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
LSM4P40070 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
LSM4P40070 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
LSM4P40070 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
LSM4P40070 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
LSM4P40070 YJL020W-AYJL020W-A 258 nt0.92□□□□□ -2.26
LSM4P40070 HIT1YJR055W 495 nt0.92□□□□□ -2.26
LSM4P40070 RPL40BYKR094C 387 nt0.92□□□□□ -2.26
LSM4P40070 YLL020CYLL020C 306 nt0.92□□□□□ -2.26
LSM4P40070 YMR001C-AYMR001C-A 231 nt0.92□□□□□ -2.26
LSM4P40070 YOR072W-AYOR072W-A 249 nt0.92□□□□□ -2.26
LSM4P40070 YOP1YPR028W 543 nt0.92□□□□□ -2.26
LSM4P40070 LYS14YDR034C 2373 nt0.91□□□□□ -2.26
LSM4P40070 YAP6YDR259C 1152 nt0.91□□□□□ -2.26
LSM4P40070 RTR1YER139C 681 nt0.91□□□□□ -2.26
LSM4P40070 YFL019CYFL019C 354 nt0.91□□□□□ -2.26
LSM4P40070 RPS27AYKL156W 249 nt0.91□□□□□ -2.26
LSM4P40070 YLR154W-FYLR154W-F 141 nt0.91□□□□□ -2.26
LSM4P40070 YAR047CYAR047C 321 nt0.91□□□□□ -2.26
LSM4P40070 RRT1YBL048W 312 nt0.91□□□□□ -2.26
LSM4P40070 RPL9BYNL067W 576 nt0.91□□□□□ -2.26
LSM4P40070 YBR285WYBR285W 435 nt0.91□□□□□ -2.26
LSM4P40070 BEM2YER155C 6504 nt0.91□□□□□ -2.26
LSM4P40070 SCC2YDR180W 4482 nt0.91□□□□□ -2.26
LSM4P40070 AIM9YER080W 1884 nt0.9□□□□□ -2.26
LSM4P40070 SEC5YDR166C 2916 nt0.9□□□□□ -2.26
LSM4P40070 RPL26AYLR344W 384 nt0.9□□□□□ -2.27
LSM4P40070 TIM18YOR297C 579 nt0.9□□□□□ -2.27
LSM4P40070 SPT7YBR081C 3999 nt0.9□□□□□ -2.27
LSM4P40070 EAF1YDR359C 2949 nt0.9□□□□□ -2.27
LSM4P40070 ZIP1YDR285W 2628 nt0.89□□□□□ -2.27
LSM4P40070 SRP14YDL092W 441 nt0.89□□□□□ -2.27
LSM4P40070 BSC3YLR465C 309 nt0.89□□□□□ -2.27
LSM4P40070 YOR053WYOR053W 342 nt0.89□□□□□ -2.27
LSM4P40070 SWI6YLR182W 2412 nt0.89□□□□□ -2.27
LSM4P40070 SMC1YFL008W 3678 nt0.89□□□□□ -2.27
LSM4P40070 SEC3YER008C 4011 nt0.88□□□□□ -2.27
LSM4P40070 YGL217CYGL217C 342 nt0.88□□□□□ -2.27
LSM4P40070 YIL059CYIL059C 366 nt0.88□□□□□ -2.27
LSM4P40070 YKL145W-AYKL145W-A 93 nt0.88□□□□□ -2.27
LSM4P40070 YOR161W-BYOR161W-B 261 nt0.88□□□□□ -2.27
LSM4P40070 YOR293C-AYOR293C-A 150 nt0.88□□□□□ -2.27
LSM4P40070 YPL229WYPL229W 621 nt0.88□□□□□ -2.27
LSM4P40070 RFX1YLR176C 2436 nt0.88□□□□□ -2.27
LSM4P40070 PCF11YDR228C 1881 nt0.88□□□□□ -2.27
LSM4P40070 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
LSM4P40070 RAD50YNL250W 3939 nt0.87□□□□□ -2.27
LSM4P40070 YDR157WYDR157W 402 nt0.87□□□□□ -2.27
LSM4P40070 CYC7YEL039C 342 nt0.87□□□□□ -2.27
LSM4P40070 YKL083WYKL083W 615 nt0.87□□□□□ -2.27
LSM4P40070 YAL068W-AYAL068W-A 255 nt0.87□□□□□ -2.27
LSM4P40070 ENV11YGR071C 2583 nt0.87□□□□□ -2.27
LSM4P40070 EFR3YMR212C 2349 nt0.87□□□□□ -2.27
LSM4P40070 YDR118W-AYDR118W-A 117 nt0.86□□□□□ -2.27
LSM4P40070 YMR141W-AYMR141W-A 225 nt0.86□□□□□ -2.27
LSM4P40070 SLX4YLR135W 2247 nt0.86□□□□□ -2.27
LSM4P40070 YLL032CYLL032C 2478 nt0.86□□□□□ -2.27
LSM4P40070 PIG1YLR273C 1947 nt0.85□□□□□ -2.27
LSM4P40070 YER137W-AYER137W-A 306 nt0.85□□□□□ -2.27
LSM4P40070 MRPL31YKL138C 396 nt0.85□□□□□ -2.27
LSM4P40070 YMR321CYMR321C 318 nt0.85□□□□□ -2.27
LSM4P40070 NUT2YPR168W 474 nt0.85□□□□□ -2.27
LSM4P40070 YDR182W-AYDR182W-A 204 nt0.84□□□□□ -2.27
LSM4P40070 YGR174W-AYGR174W-A 87 nt0.84□□□□□ -2.27
LSM4P40070 YHL041WYHL041W 450 nt0.84□□□□□ -2.27
LSM4P40070 UPS1YLR193C 528 nt0.84□□□□□ -2.27
LSM4P40070 YOR121CYOR121C 306 nt0.84□□□□□ -2.27
LSM4P40070 YLL054CYLL054C 2532 nt0.84□□□□□ -2.28
LSM4P40070 CDC39YCR093W 6327 nt0.84□□□□□ -2.28
LSM4P40070 SWI4YER111C 3282 nt0.83□□□□□ -2.28
LSM4P40070 SLY1YDR189W 2001 nt0.83□□□□□ -2.28
LSM4P40070 NUT1YGL151W 3399 nt0.83□□□□□ -2.28
LSM4P40070 YCS4YLR272C 3531 nt0.82□□□□□ -2.28
LSM4P40070 STB6YKL072W 2301 nt0.82□□□□□ -2.28
LSM4P40070 IFH1YLR223C 3258 nt0.82□□□□□ -2.28
LSM4P40070 SGO1YOR073W 1773 nt0.82□□□□□ -2.28
LSM4P40070 KAP120YPL125W 3099 nt0.82□□□□□ -2.28
LSM4P40070 SAS3YBL052C 2496 nt0.81□□□□□ -2.28
LSM4P40070 snR14snR14 160 nt0.81□□□□□ -2.28
LSM4P40070 snR51snR51 107 nt0.81□□□□□ -2.28
LSM4P40070 AI5_ALPHAQ0070 1893 nt0.81□□□□□ -2.28
LSM4P40070 ROM2YLR371W 4071 nt0.81□□□□□ -2.28
LSM4P40070 NOC3YLR002C 1992 nt0.8□□□□□ -2.28
LSM4P40070 TAH1YCR060W 336 nt0.8□□□□□ -2.28
LSM4P40070 ATG31YDR022C 591 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms