Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 YOR072W-BYOR072W-B 162 nt2.56□□□□□ -2
RPN3P40016 NUP170YBL079W 4509 nt2.55□□□□□ -2
RPN3P40016 ZRG8YER033C 3231 nt2.55□□□□□ -2
RPN3P40016 SCD5YOR329C 2619 nt2.55□□□□□ -2
RPN3P40016 YEL073CYEL073C 324 nt2.54□□□□□ -2
RPN3P40016 YBR174CYBR174C 315 nt2.54□□□□□ -2
RPN3P40016 TRA1YHR099W 11235 nt2.54□□□□□ -2
RPN3P40016 ORC2YBR060C 1863 nt2.54□□□□□ -2
RPN3P40016 PRP42YDR235W 1635 nt2.53□□□□□ -2
RPN3P40016 YDR003W-AYDR003W-A 123 nt2.53□□□□□ -2
RPN3P40016 RPL34BYIL052C 366 nt2.53□□□□□ -2
RPN3P40016 UTP14YML093W 2700 nt2.52□□□□□ -2.01
RPN3P40016 YIR044CYIR044C 186 nt2.52□□□□□ -2.01
RPN3P40016 RPS25BYLR333C 327 nt2.52□□□□□ -2.01
RPN3P40016 YDR239CYDR239C 2364 nt2.52□□□□□ -2.01
RPN3P40016 UBR1YGR184C 5853 nt2.52□□□□□ -2.01
RPN3P40016 GEA1YJR031C 4227 nt2.52□□□□□ -2.01
RPN3P40016 YJL120WYJL120W 324 nt2.51□□□□□ -2.01
RPN3P40016 ATP7YKL016C 525 nt2.51□□□□□ -2.01
RPN3P40016 YNL018CYNL018C 1839 nt2.51□□□□□ -2.01
RPN3P40016 RLM1YPL089C 2031 nt2.51□□□□□ -2.01
RPN3P40016 SVL3YPL032C 2478 nt2.5□□□□□ -2.01
RPN3P40016 PUT3YKL015W 2940 nt2.5□□□□□ -2.01
RPN3P40016 ZRG17YNR039C 1818 nt2.49□□□□□ -2.01
RPN3P40016 COY1YKL179C 2040 nt2.49□□□□□ -2.01
RPN3P40016 YLL019W-AYLL019W-A 93 nt2.49□□□□□ -2.01
RPN3P40016 YOR343W-BYOR343W-B 5313 nt2.48□□□□□ -2.01
RPN3P40016 SMC6YLR383W 3345 nt2.48□□□□□ -2.01
RPN3P40016 YLL007CYLL007C 1998 nt2.48□□□□□ -2.01
RPN3P40016 TFC8YPL007C 1767 nt2.48□□□□□ -2.01
RPN3P40016 CAT2YML042W 2013 nt2.47□□□□□ -2.01
RPN3P40016 CHC1YGL206C 4962 nt2.47□□□□□ -2.01
RPN3P40016 NOP14YDL148C 2433 nt2.47□□□□□ -2.01
RPN3P40016 PAU3YCR104W 375 nt2.47□□□□□ -2.01
RPN3P40016 YMR242W-AYMR242W-A 90 nt2.47□□□□□ -2.01
RPN3P40016 REV3YPL167C 4515 nt2.46□□□□□ -2.02
RPN3P40016 YDL196WYDL196W 330 nt2.46□□□□□ -2.02
RPN3P40016 ZIP2YGL249W 2115 nt2.46□□□□□ -2.02
RPN3P40016 SIR3YLR442C 2937 nt2.46□□□□□ -2.02
RPN3P40016 SAP190YKR028W 3102 nt2.46□□□□□ -2.02
RPN3P40016 RAD34YDR314C 2079 nt2.45□□□□□ -2.02
RPN3P40016 RPL31AYDL075W 342 nt2.45□□□□□ -2.02
RPN3P40016 YHR210CYHR210C 1026 nt2.45□□□□□ -2.02
RPN3P40016 ACM1YPL267W 630 nt2.45□□□□□ -2.02
RPN3P40016 SGM1YJR134C 2124 nt2.45□□□□□ -2.02
RPN3P40016 NOC3YLR002C 1992 nt2.44□□□□□ -2.02
RPN3P40016 YCR102W-AYCR102W-A 198 nt2.44□□□□□ -2.02
RPN3P40016 HSL1YKL101W 4557 nt2.44□□□□□ -2.02
RPN3P40016 ZIP1YDR285W 2628 nt2.44□□□□□ -2.02
RPN3P40016 HSH155YMR288W 2916 nt2.44□□□□□ -2.02
RPN3P40016 STH1YIL126W 4080 nt2.43□□□□□ -2.02
RPN3P40016 NAM7YMR080C 2916 nt2.43□□□□□ -2.02
RPN3P40016 SNU13YEL026W 381 nt2.43□□□□□ -2.02
RPN3P40016 YBR178WYBR178W 375 nt2.43□□□□□ -2.02
RPN3P40016 GIP3YPL137C 3831 nt2.43□□□□□ -2.02
RPN3P40016 YEF3YLR249W 3135 nt2.42□□□□□ -2.02
RPN3P40016 SAS3YBL052C 2496 nt2.42□□□□□ -2.02
RPN3P40016 NCA2YPR155C 1851 nt2.42□□□□□ -2.02
RPN3P40016 YOR329W-AYOR329W-A 210 nt2.42□□□□□ -2.02
RPN3P40016 AHC1YOR023C 1701 nt2.42□□□□□ -2.02
RPN3P40016 VPS13YLL040C 9435 nt2.41□□□□□ -2.02
RPN3P40016 FIG4YNL325C 2640 nt2.41□□□□□ -2.02
RPN3P40016 MMS22YLR320W 4365 nt2.41□□□□□ -2.02
RPN3P40016 DCP2YNL118C 2913 nt2.41□□□□□ -2.02
RPN3P40016 TFC3YAL001C 3483 nt2.41□□□□□ -2.02
RPN3P40016 RAV1YJR033C 4074 nt2.4□□□□□ -2.02
RPN3P40016 YDR524C-AYDR524C-A 120 nt2.4□□□□□ -2.03
RPN3P40016 ISW1YBR245C 3390 nt2.4□□□□□ -2.03
RPN3P40016 MAD1YGL086W 2250 nt2.4□□□□□ -2.03
RPN3P40016 AIM44YPL158C 2277 nt2.4□□□□□ -2.03
RPN3P40016 ENV11YGR071C 2583 nt2.4□□□□□ -2.03
RPN3P40016 MLH1YMR167W 2310 nt2.39□□□□□ -2.03
RPN3P40016 YOR108C-AYOR108C-A 210 nt2.39□□□□□ -2.03
RPN3P40016 UTP22YGR090W 3714 nt2.39□□□□□ -2.03
RPN3P40016 SPF1YEL031W 3648 nt2.38□□□□□ -2.03
RPN3P40016 KTI11YBL071W-A 249 nt2.38□□□□□ -2.03
RPN3P40016 PIP2YOR363C 2991 nt2.37□□□□□ -2.03
RPN3P40016 TOP2YNL088W 4287 nt2.37□□□□□ -2.03
RPN3P40016 BNI1YNL271C 5862 nt2.37□□□□□ -2.03
RPN3P40016 MET18YIL128W 3099 nt2.37□□□□□ -2.03
RPN3P40016 PSD2YGR170W 3417 nt2.36□□□□□ -2.03
RPN3P40016 DGR2YKL121W 2559 nt2.36□□□□□ -2.03
RPN3P40016 BRP1YGL007W 378 nt2.36□□□□□ -2.03
RPN3P40016 RPS17AYML024W 411 nt2.36□□□□□ -2.03
RPN3P40016 SSD1YDR293C 3753 nt2.36□□□□□ -2.03
RPN3P40016 APL2YKL135C 2181 nt2.36□□□□□ -2.03
RPN3P40016 NUP100YKL068W 2880 nt2.35□□□□□ -2.03
RPN3P40016 YJL052C-AYJL052C-A 120 nt2.35□□□□□ -2.03
RPN3P40016 DNF1YER166W 4716 nt2.35□□□□□ -2.03
RPN3P40016 PIG1YLR273C 1947 nt2.34□□□□□ -2.03
RPN3P40016 MAK10YEL053C 2202 nt2.34□□□□□ -2.03
RPN3P40016 SEC16YPL085W 6588 nt2.34□□□□□ -2.03
RPN3P40016 YBL109WYBL109W 336 nt2.34□□□□□ -2.03
RPN3P40016 FAR11YNL127W 2862 nt2.34□□□□□ -2.04
RPN3P40016 BPH1YCR032W 6504 nt2.34□□□□□ -2.04
RPN3P40016 HAL9YOL089C 3093 nt2.33□□□□□ -2.04
RPN3P40016 YHL015W-AYHL015W-A 84 nt2.33□□□□□ -2.04
RPN3P40016 RPS29AYLR388W 171 nt2.33□□□□□ -2.04
RPN3P40016 YCL001W-BYCL001W-B 255 nt2.33□□□□□ -2.04
RPN3P40016 KOG1YHR186C 4674 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms