Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 ZIP1YDR285W 2628 nt2.59□□□□□ -1.99
PEX28P38848 SAP1YER047C 2694 nt2.59□□□□□ -1.99
PEX28P38848 NUP170YBL079W 4509 nt2.59□□□□□ -1.99
PEX28P38848 PNC1YGL037C 651 nt2.59□□□□□ -1.99
PEX28P38848 TOP2YNL088W 4287 nt2.59□□□□□ -2
PEX28P38848 YDR239CYDR239C 2364 nt2.59□□□□□ -2
PEX28P38848 ZIP2YGL249W 2115 nt2.59□□□□□ -2
PEX28P38848 SCP160YJL080C 3669 nt2.58□□□□□ -2
PEX28P38848 CSF1YLR087C 8877 nt2.58□□□□□ -2
PEX28P38848 NOP14YDL148C 2433 nt2.58□□□□□ -2
PEX28P38848 SAS3YBL052C 2496 nt2.58□□□□□ -2
PEX28P38848 NAM7YMR080C 2916 nt2.58□□□□□ -2
PEX28P38848 DCP2YNL118C 2913 nt2.58□□□□□ -2
PEX28P38848 RPS29AYLR388W 171 nt2.58□□□□□ -2
PEX28P38848 RPL33BYOR234C 324 nt2.58□□□□□ -2
PEX28P38848 snR48snR48 113 nt2.58□□□□□ -2
PEX28P38848 RAD34YDR314C 2079 nt2.57□□□□□ -2
PEX28P38848 FAR11YNL127W 2862 nt2.57□□□□□ -2
PEX28P38848 SEC26YDR238C 2922 nt2.57□□□□□ -2
PEX28P38848 HSH155YMR288W 2916 nt2.57□□□□□ -2
PEX28P38848 ECM29YHL030W 5607 nt2.57□□□□□ -2
PEX28P38848 CYR1YJL005W 6081 nt2.56□□□□□ -2
PEX28P38848 YIR044CYIR044C 186 nt2.56□□□□□ -2
PEX28P38848 ATP7YKL016C 525 nt2.56□□□□□ -2
PEX28P38848 YOR345CYOR345C 351 nt2.56□□□□□ -2
PEX28P38848 ENV11YGR071C 2583 nt2.56□□□□□ -2
PEX28P38848 PDR11YIL013C 4236 nt2.56□□□□□ -2
PEX28P38848 RPS22AYJL190C 393 nt2.55□□□□□ -2
PEX28P38848 ACM1YPL267W 630 nt2.55□□□□□ -2
PEX28P38848 NUM1YDR150W 8247 nt2.55□□□□□ -2
PEX28P38848 NCA2YPR155C 1851 nt2.54□□□□□ -2
PEX28P38848 APL5YPL195W 2799 nt2.54□□□□□ -2
PEX28P38848 PMP1YCR024C-A 123 nt2.54□□□□□ -2
PEX28P38848 SNU13YEL026W 381 nt2.54□□□□□ -2
PEX28P38848 KTI11YBL071W-A 249 nt2.54□□□□□ -2
PEX28P38848 SGM1YJR134C 2124 nt2.54□□□□□ -2
PEX28P38848 NOC3YLR002C 1992 nt2.54□□□□□ -2
PEX28P38848 SIR3YLR442C 2937 nt2.54□□□□□ -2
PEX28P38848 UBR1YGR184C 5853 nt2.53□□□□□ -2
PEX28P38848 PDR1YGL013C 3207 nt2.53□□□□□ -2
PEX28P38848 MAD1YGL086W 2250 nt2.53□□□□□ -2
PEX28P38848 MAK10YEL053C 2202 nt2.53□□□□□ -2
PEX28P38848 CAT2YML042W 2013 nt2.53□□□□□ -2
PEX28P38848 AXL1YPR122W 3627 nt2.53□□□□□ -2
PEX28P38848 PRP42YDR235W 1635 nt2.53□□□□□ -2
PEX28P38848 APL2YKL135C 2181 nt2.52□□□□□ -2.01
PEX28P38848 SRO77YBL106C 3033 nt2.52□□□□□ -2.01
PEX28P38848 ORC2YBR060C 1863 nt2.52□□□□□ -2.01
PEX28P38848 YDL196WYDL196W 330 nt2.51□□□□□ -2.01
PEX28P38848 YHR210CYHR210C 1026 nt2.51□□□□□ -2.01
PEX28P38848 PAU3YCR104W 375 nt2.5□□□□□ -2.01
PEX28P38848 BRP1YGL007W 378 nt2.5□□□□□ -2.01
PEX28P38848 YIL174WYIL174W 228 nt2.5□□□□□ -2.01
PEX28P38848 YJL222W-AYJL222W-A 228 nt2.5□□□□□ -2.01
PEX28P38848 YLL019W-AYLL019W-A 93 nt2.5□□□□□ -2.01
PEX28P38848 COY1YKL179C 2040 nt2.5□□□□□ -2.01
PEX28P38848 UBP15YMR304W 3693 nt2.49□□□□□ -2.01
PEX28P38848 KRE33YNL132W 3171 nt2.49□□□□□ -2.01
PEX28P38848 RPL31AYDL075W 342 nt2.49□□□□□ -2.01
PEX28P38848 RPS17AYML024W 411 nt2.49□□□□□ -2.01
PEX28P38848 LCL1YPL056C 306 nt2.49□□□□□ -2.01
PEX28P38848 YLL007CYLL007C 1998 nt2.49□□□□□ -2.01
PEX28P38848 HAL9YOL089C 3093 nt2.48□□□□□ -2.01
PEX28P38848 AIM44YPL158C 2277 nt2.48□□□□□ -2.01
PEX28P38848 MSH5YDL154W 2706 nt2.48□□□□□ -2.01
PEX28P38848 ESC1YMR219W 4977 nt2.47□□□□□ -2.01
PEX28P38848 TRL1YJL087C 2484 nt2.47□□□□□ -2.01
PEX28P38848 FIG4YNL325C 2640 nt2.47□□□□□ -2.01
PEX28P38848 EDS1YBR033W 2760 nt2.47□□□□□ -2.01
PEX28P38848 PTP2YOR208W 2253 nt2.47□□□□□ -2.01
PEX28P38848 YLR035C-AYLR035C-A 3468 nt2.47□□□□□ -2.01
PEX28P38848 YDR341CYDR341C 1824 nt2.47□□□□□ -2.01
PEX28P38848 MLH3YPL164C 2148 nt2.47□□□□□ -2.01
PEX28P38848 PIP2YOR363C 2991 nt2.46□□□□□ -2.01
PEX28P38848 ARP8YOR141C 2646 nt2.45□□□□□ -2.02
PEX28P38848 DGR2YKL121W 2559 nt2.45□□□□□ -2.02
PEX28P38848 YIL156W-BYIL156W-B 222 nt2.45□□□□□ -2.02
PEX28P38848 CDC60YPL160W 3273 nt2.44□□□□□ -2.02
PEX28P38848 RTT107YHR154W 3213 nt2.44□□□□□ -2.02
PEX28P38848 PHO91YNR013C 2685 nt2.44□□□□□ -2.02
PEX28P38848 YBL053WYBL053W 375 nt2.44□□□□□ -2.02
PEX28P38848 SYH1YPL105C 2550 nt2.43□□□□□ -2.02
PEX28P38848 PSD2YGR170W 3417 nt2.43□□□□□ -2.02
PEX28P38848 AHC1YOR023C 1701 nt2.42□□□□□ -2.02
PEX28P38848 PIG1YLR273C 1947 nt2.42□□□□□ -2.02
PEX28P38848 SSD1YDR293C 3753 nt2.42□□□□□ -2.02
PEX28P38848 BUD2YKL092C 3315 nt2.42□□□□□ -2.02
PEX28P38848 CTR9YOL145C 3234 nt2.41□□□□□ -2.02
PEX28P38848 SLD3YGL113W 2007 nt2.41□□□□□ -2.02
PEX28P38848 YBR221W-AYBR221W-A 105 nt2.41□□□□□ -2.02
PEX28P38848 ESL2YKR096W 3588 nt2.41□□□□□ -2.02
PEX28P38848 HMI1YOL095C 2121 nt2.41□□□□□ -2.02
PEX28P38848 AGC1YPR021C 2709 nt2.4□□□□□ -2.02
PEX28P38848 YKR075W-AYKR075W-A 270 nt2.4□□□□□ -2.03
PEX28P38848 GIP3YPL137C 3831 nt2.4□□□□□ -2.03
PEX28P38848 PET309YLR067C 2898 nt2.4□□□□□ -2.03
PEX28P38848 MSB1YOR188W 3414 nt2.4□□□□□ -2.03
PEX28P38848 RAV1YJR033C 4074 nt2.39□□□□□ -2.03
PEX28P38848 RPL37BYDR500C 267 nt2.39□□□□□ -2.03
PEX28P38848 IFH1YLR223C 3258 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms