Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 PEP3YLR148W 2757 nt2.46□□□□□ -2.02
DEF1P35732 GCN2YDR283C 4980 nt2.46□□□□□ -2.02
DEF1P35732 SWI6YLR182W 2412 nt2.46□□□□□ -2.02
DEF1P35732 YDR182W-AYDR182W-A 204 nt2.45□□□□□ -2.02
DEF1P35732 PIG1YLR273C 1947 nt2.44□□□□□ -2.02
DEF1P35732 EMC6YLL014W 327 nt2.44□□□□□ -2.02
DEF1P35732 HRD3YLR207W 2502 nt2.44□□□□□ -2.02
DEF1P35732 PDR3YBL005W 2931 nt2.44□□□□□ -2.02
DEF1P35732 MSB1YOR188W 3414 nt2.43□□□□□ -2.02
DEF1P35732 SDC25YLL016W 3147 nt2.43□□□□□ -2.02
DEF1P35732 UBR1YGR184C 5853 nt2.43□□□□□ -2.02
DEF1P35732 PTP3YER075C 2787 nt2.43□□□□□ -2.02
DEF1P35732 FMP16YDR070C 282 nt2.43□□□□□ -2.02
DEF1P35732 BRP1YGL007W 378 nt2.43□□□□□ -2.02
DEF1P35732 YHR217CYHR217C 462 nt2.43□□□□□ -2.02
DEF1P35732 NEO1YIL048W 3456 nt2.43□□□□□ -2.02
DEF1P35732 TAE2YPL009C 3117 nt2.43□□□□□ -2.02
DEF1P35732 RPH1YER169W 2391 nt2.42□□□□□ -2.02
DEF1P35732 PMP2YEL017C-A 132 nt2.42□□□□□ -2.02
DEF1P35732 YHL015W-AYHL015W-A 84 nt2.42□□□□□ -2.02
DEF1P35732 YNL114CYNL114C 372 nt2.42□□□□□ -2.02
DEF1P35732 YHR073W-AYHR073W-A 177 nt2.41□□□□□ -2.02
DEF1P35732 YNL103W-AYNL103W-A 90 nt2.41□□□□□ -2.02
DEF1P35732 YOR314W-AYOR314W-A 111 nt2.41□□□□□ -2.02
DEF1P35732 PRP6YBR055C 2700 nt2.41□□□□□ -2.02
DEF1P35732 AGC1YPR021C 2709 nt2.41□□□□□ -2.02
DEF1P35732 SPC98YNL126W 2541 nt2.41□□□□□ -2.02
DEF1P35732 VMR1YHL035C 4779 nt2.41□□□□□ -2.02
DEF1P35732 GIP3YPL137C 3831 nt2.4□□□□□ -2.02
DEF1P35732 RFX1YLR176C 2436 nt2.4□□□□□ -2.02
DEF1P35732 PDR11YIL013C 4236 nt2.4□□□□□ -2.02
DEF1P35732 YJL022WYJL022W 309 nt2.4□□□□□ -2.03
DEF1P35732 YBL012CYBL012C 402 nt2.4□□□□□ -2.03
DEF1P35732 CRS5YOR031W 210 nt2.4□□□□□ -2.03
DEF1P35732 MSC6YOR354C 2079 nt2.4□□□□□ -2.03
DEF1P35732 PDR1YGL013C 3207 nt2.4□□□□□ -2.03
DEF1P35732 RIC1YLR039C 3171 nt2.39□□□□□ -2.03
DEF1P35732 IST2YBR086C 2841 nt2.39□□□□□ -2.03
DEF1P35732 SRP14YDL092W 441 nt2.39□□□□□ -2.03
DEF1P35732 YER053C-AYER053C-A 114 nt2.39□□□□□ -2.03
DEF1P35732 YOR102WYOR102W 351 nt2.39□□□□□ -2.03
DEF1P35732 YBR174CYBR174C 315 nt2.39□□□□□ -2.03
DEF1P35732 SPO75YLL005C 2607 nt2.39□□□□□ -2.03
DEF1P35732 SWI5YDR146C 2130 nt2.39□□□□□ -2.03
DEF1P35732 INP51YIL002C 2841 nt2.39□□□□□ -2.03
DEF1P35732 UBP2YOR124C 3819 nt2.39□□□□□ -2.03
DEF1P35732 GIS1YDR096W 2685 nt2.38□□□□□ -2.03
DEF1P35732 YDL196WYDL196W 330 nt2.38□□□□□ -2.03
DEF1P35732 YLL019W-AYLL019W-A 93 nt2.38□□□□□ -2.03
DEF1P35732 RPS17AYML024W 411 nt2.38□□□□□ -2.03
DEF1P35732 PUT3YKL015W 2940 nt2.38□□□□□ -2.03
DEF1P35732 SLY1YDR189W 2001 nt2.37□□□□□ -2.03
DEF1P35732 YOR055WYOR055W 435 nt2.37□□□□□ -2.03
DEF1P35732 SCH9YHR205W 2475 nt2.37□□□□□ -2.03
DEF1P35732 STB4YMR019W 2850 nt2.37□□□□□ -2.03
DEF1P35732 MNL2YLR057W 2550 nt2.37□□□□□ -2.03
DEF1P35732 NIP100YPL174C 2607 nt2.37□□□□□ -2.03
DEF1P35732 YDR341CYDR341C 1824 nt2.36□□□□□ -2.03
DEF1P35732 SNC1YAL030W 354 nt2.36□□□□□ -2.03
DEF1P35732 TMA7YLR262C-A 195 nt2.36□□□□□ -2.03
DEF1P35732 KAP123YER110C 3342 nt2.35□□□□□ -2.03
DEF1P35732 YBR277CYBR277C 402 nt2.35□□□□□ -2.03
DEF1P35732 MNE1YOR350C 1992 nt2.35□□□□□ -2.03
DEF1P35732 NCA2YPR155C 1851 nt2.35□□□□□ -2.03
DEF1P35732 PAU3YCR104W 375 nt2.34□□□□□ -2.03
DEF1P35732 YIL156W-BYIL156W-B 222 nt2.34□□□□□ -2.03
DEF1P35732 RPS25BYLR333C 327 nt2.34□□□□□ -2.03
DEF1P35732 VTC3YPL019C 2508 nt2.34□□□□□ -2.04
DEF1P35732 SPO22YIL073C 2928 nt2.34□□□□□ -2.04
DEF1P35732 FIG4YNL325C 2640 nt2.34□□□□□ -2.04
DEF1P35732 LYS14YDR034C 2373 nt2.34□□□□□ -2.04
DEF1P35732 VPS16YPL045W 2397 nt2.34□□□□□ -2.04
DEF1P35732 REV3YPL167C 4515 nt2.33□□□□□ -2.04
DEF1P35732 YOR394C-AYOR394C-A 168 nt2.33□□□□□ -2.04
DEF1P35732 YBR099CYBR099C 384 nt2.33□□□□□ -2.04
DEF1P35732 MGM1YOR211C 2646 nt2.33□□□□□ -2.04
DEF1P35732 CRM1YGR218W 3255 nt2.32□□□□□ -2.04
DEF1P35732 YJL120WYJL120W 324 nt2.32□□□□□ -2.04
DEF1P35732 PDR8YLR266C 2106 nt2.32□□□□□ -2.04
DEF1P35732 MGA2YIR033W 3342 nt2.31□□□□□ -2.04
DEF1P35732 SSD1YDR293C 3753 nt2.31□□□□□ -2.04
DEF1P35732 YCR043CYCR043C 384 nt2.31□□□□□ -2.04
DEF1P35732 PAU18YLL064C 363 nt2.31□□□□□ -2.04
DEF1P35732 PAU6YNR076W 363 nt2.31□□□□□ -2.04
DEF1P35732 YBR221W-AYBR221W-A 105 nt2.31□□□□□ -2.04
DEF1P35732 AIM44YPL158C 2277 nt2.3□□□□□ -2.04
DEF1P35732 TOR2YKL203C 7425 nt2.3□□□□□ -2.04
DEF1P35732 EMP24YGL200C 612 nt2.3□□□□□ -2.04
DEF1P35732 ACB1YGR037C 264 nt2.3□□□□□ -2.04
DEF1P35732 tT(UGU)HtT(UGU)H 72 nt2.3□□□□□ -2.04
DEF1P35732 ATP7YKL016C 525 nt2.3□□□□□ -2.04
DEF1P35732 YCL046WYCL046W 324 nt2.3□□□□□ -2.04
DEF1P35732 RLM1YPL089C 2031 nt2.3□□□□□ -2.04
DEF1P35732 RGA2YDR379W 3030 nt2.29□□□□□ -2.04
DEF1P35732 RRP6YOR001W 2202 nt2.29□□□□□ -2.04
DEF1P35732 STE11YLR362W 2154 nt2.29□□□□□ -2.04
DEF1P35732 YCR095W-AYCR095W-A 159 nt2.29□□□□□ -2.04
DEF1P35732 CBF2YGR140W 2871 nt2.29□□□□□ -2.04
DEF1P35732 LHS1YKL073W 2646 nt2.29□□□□□ -2.04
DEF1P35732 SET2YJL168C 2202 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms