Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.18■■□□□ 1.14
COL1A2P08123 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.18■■□□□ 1.14
COL1A2P08123 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.18■■□□□ 1.14
COL1A2P08123 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.18■■□□□ 1.14
COL1A2P08123 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
COL1A2P08123 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 AC005229.4-201ENST00000610085 2198 ntBASIC22.18■■□□□ 1.14
COL1A2P08123 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.17■■□□□ 1.14
COL1A2P08123 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
COL1A2P08123 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL1A2P08123 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.17■■□□□ 1.14
COL1A2P08123 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.16■■□□□ 1.14
COL1A2P08123 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL1A2P08123 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.16■■□□□ 1.14
COL1A2P08123 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.16■■□□□ 1.14
COL1A2P08123 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL1A2P08123 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL1A2P08123 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL1A2P08123 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL1A2P08123 AP001412.1-201ENST00000608405 714 ntBASIC22.16■■□□□ 1.14
COL1A2P08123 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.16■■□□□ 1.14
COL1A2P08123 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
COL1A2P08123 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL1A2P08123 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL1A2P08123 NBPF21P-201ENST00000425093 1451 ntBASIC22.15■■□□□ 1.14
COL1A2P08123 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 SNORA78-201ENST00000459373 127 ntBASIC22.15■■□□□ 1.14
COL1A2P08123 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.15■■□□□ 1.14
COL1A2P08123 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.15■■□□□ 1.14
COL1A2P08123 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A2P08123 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
COL1A2P08123 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
COL1A2P08123 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.15■■□□□ 1.14
COL1A2P08123 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A2P08123 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.14■■□□□ 1.14
COL1A2P08123 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.14■■□□□ 1.14
COL1A2P08123 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A2P08123 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
COL1A2P08123 KRT16P5-201ENST00000455284 522 ntBASIC22.14■■□□□ 1.14
COL1A2P08123 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.14■■□□□ 1.14
COL1A2P08123 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.14■■□□□ 1.14
COL1A2P08123 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A2P08123 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.14■■□□□ 1.14
COL1A2P08123 AL049637.2-201ENST00000641778 930 ntBASIC22.14■■□□□ 1.14
COL1A2P08123 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A2P08123 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A2P08123 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A2P08123 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A2P08123 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
COL1A2P08123 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A2P08123 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A2P08123 DPP3P2-201ENST00000416030 1696 ntBASIC22.14■■□□□ 1.13
COL1A2P08123 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A2P08123 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A2P08123 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.13■■□□□ 1.13
COL1A2P08123 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.13■■□□□ 1.13
COL1A2P08123 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.13■■□□□ 1.13
COL1A2P08123 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.13■■□□□ 1.13
COL1A2P08123 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A2P08123 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.13■■□□□ 1.13
COL1A2P08123 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.13■■□□□ 1.13
COL1A2P08123 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A2P08123 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A2P08123 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.13■■□□□ 1.13
COL1A2P08123 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
COL1A2P08123 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.13■■□□□ 1.13
COL1A2P08123 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
COL1A2P08123 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL1A2P08123 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A2P08123 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A2P08123 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.12■■□□□ 1.13
COL1A2P08123 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms