Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT12Q53H54 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRMT12Q53H54 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
TRMT12Q53H54 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.86■□□□□ 0.61
TRMT12Q53H54 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 SLC29A4P1-201ENST00000398760 971 ntBASIC18.85■□□□□ 0.61
TRMT12Q53H54 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.85■□□□□ 0.61
TRMT12Q53H54 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRMT12Q53H54 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT12Q53H54 AC112907.3-201ENST00000577781 2400 ntBASIC18.84■□□□□ 0.61
TRMT12Q53H54 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT12Q53H54 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT12Q53H54 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT12Q53H54 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRMT12Q53H54 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.84■□□□□ 0.61
TRMT12Q53H54 AL109923.1-201ENST00000618799 583 ntBASIC18.84■□□□□ 0.61
TRMT12Q53H54 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRMT12Q53H54 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.84■□□□□ 0.61
TRMT12Q53H54 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TRMT12Q53H54 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRMT12Q53H54 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT12Q53H54 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.83■□□□□ 0.61
TRMT12Q53H54 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.83■□□□□ 0.61
TRMT12Q53H54 PCDHAC2-203ENST00000615316 3011 ntBASIC18.83■□□□□ 0.61
TRMT12Q53H54 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT12Q53H54 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.83■□□□□ 0.61
TRMT12Q53H54 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRMT12Q53H54 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 AC099778.1-201ENST00000568593 1911 ntBASIC18.83■□□□□ 0.6
TRMT12Q53H54 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT12Q53H54 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT12Q53H54 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRMT12Q53H54 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.83■□□□□ 0.6
TRMT12Q53H54 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.82■□□□□ 0.6
TRMT12Q53H54 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 C2orf69P4-201ENST00000565394 541 ntBASIC18.82■□□□□ 0.6
TRMT12Q53H54 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRMT12Q53H54 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.82■□□□□ 0.6
TRMT12Q53H54 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.81■□□□□ 0.6
TRMT12Q53H54 AC104771.1-201ENST00000603335 964 ntBASIC18.81■□□□□ 0.6
TRMT12Q53H54 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRMT12Q53H54 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRMT12Q53H54 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT12Q53H54 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT12Q53H54 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRMT12Q53H54 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRMT12Q53H54 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRMT12Q53H54 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.8■□□□□ 0.6
TRMT12Q53H54 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TRMT12Q53H54 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms