Protein–RNA interactions for Protein: Q08962

NIP7, 60S ribosome subunit biogenesis protein NIP7, yeastyeast

Known RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP7Q08962 snR13snR13 124 nt0.9□□□□□ -2.27
NIP7Q08962 SPO23YBR250W 1572 nt0.9□□□□□ -2.27
NIP7Q08962 SPT21YMR179W 2277 nt0.9□□□□□ -2.27
NIP7Q08962 LYS14YDR034C 2373 nt0.9□□□□□ -2.27
NIP7Q08962 YDR114CYDR114C 303 nt0.89□□□□□ -2.27
NIP7Q08962 RTR1YER139C 681 nt0.89□□□□□ -2.27
NIP7Q08962 RPL9AYGL147C 576 nt0.89□□□□□ -2.27
NIP7Q08962 HUR1YGL168W 333 nt0.89□□□□□ -2.27
NIP7Q08962 RPL34BYIL052C 366 nt0.89□□□□□ -2.27
NIP7Q08962 YLR146W-AYLR146W-A 189 nt0.89□□□□□ -2.27
NIP7Q08962 RCN2YOR220W 798 nt0.89□□□□□ -2.27
NIP7Q08962 snR14snR14 160 nt0.89□□□□□ -2.27
NIP7Q08962 TSC3YBR058C-A 243 nt0.89□□□□□ -2.27
NIP7Q08962 SWI6YLR182W 2412 nt0.89□□□□□ -2.27
NIP7Q08962 ROM2YLR371W 4071 nt0.88□□□□□ -2.27
NIP7Q08962 MXR1YER042W 555 nt0.88□□□□□ -2.27
NIP7Q08962 NUT1YGL151W 3399 nt0.88□□□□□ -2.27
NIP7Q08962 VAM6YDL077C 3150 nt0.87□□□□□ -2.27
NIP7Q08962 AI5_ALPHAQ0070 1893 nt0.87□□□□□ -2.27
NIP7Q08962 HMLALPHA2YCL067C 633 nt0.87□□□□□ -2.27
NIP7Q08962 MATALPHA2YCR039C 633 nt0.87□□□□□ -2.27
NIP7Q08962 BIG1YHR101C 1008 nt0.87□□□□□ -2.27
NIP7Q08962 APL2YKL135C 2181 nt0.86□□□□□ -2.27
NIP7Q08962 MPT5YGL178W 2580 nt0.86□□□□□ -2.27
NIP7Q08962 YER023C-AYER023C-A 213 nt0.86□□□□□ -2.27
NIP7Q08962 YER135CYER135C 393 nt0.86□□□□□ -2.27
NIP7Q08962 HIT1YJR055W 495 nt0.86□□□□□ -2.27
NIP7Q08962 GPI15YNL038W 690 nt0.86□□□□□ -2.27
NIP7Q08962 NUT2YPR168W 474 nt0.86□□□□□ -2.27
NIP7Q08962 YPR117WYPR117W 7470 nt0.86□□□□□ -2.27
NIP7Q08962 EAF1YDR359C 2949 nt0.85□□□□□ -2.27
NIP7Q08962 YCS4YLR272C 3531 nt0.85□□□□□ -2.27
NIP7Q08962 AIM44YPL158C 2277 nt0.85□□□□□ -2.27
NIP7Q08962 PXA2YKL188C 2562 nt0.85□□□□□ -2.27
NIP7Q08962 NUP145YGL092W 3954 nt0.85□□□□□ -2.27
NIP7Q08962 YHR139C-AYHR139C-A 312 nt0.85□□□□□ -2.27
NIP7Q08962 EAF6YJR082C 342 nt0.85□□□□□ -2.27
NIP7Q08962 APL3YBL037W 3078 nt0.85□□□□□ -2.27
NIP7Q08962 RPL32YBL092W 393 nt0.85□□□□□ -2.27
NIP7Q08962 NST1YNL091W 3723 nt0.84□□□□□ -2.27
NIP7Q08962 EMC4YGL231C 573 nt0.84□□□□□ -2.27
NIP7Q08962 YGL239CYGL239C 315 nt0.84□□□□□ -2.27
NIP7Q08962 SDH2YLL041C 801 nt0.84□□□□□ -2.27
NIP7Q08962 YMR175W-AYMR175W-A 195 nt0.84□□□□□ -2.27
NIP7Q08962 YNR025CYNR025C 360 nt0.84□□□□□ -2.27
NIP7Q08962 SCW11YGL028C 1629 nt0.84□□□□□ -2.28
NIP7Q08962 STB6YKL072W 2301 nt0.84□□□□□ -2.28
NIP7Q08962 SAS3YBL052C 2496 nt0.83□□□□□ -2.28
NIP7Q08962 YCR001WYCR001W 315 nt0.82□□□□□ -2.28
NIP7Q08962 URM1YIL008W 300 nt0.82□□□□□ -2.28
NIP7Q08962 CLU1YMR012W 3834 nt0.82□□□□□ -2.28
NIP7Q08962 PBI2YNL015W 228 nt0.82□□□□□ -2.28
NIP7Q08962 RUF22RUF22 515 nt0.82□□□□□ -2.28
NIP7Q08962 YBR012CYBR012C 420 nt0.82□□□□□ -2.28
NIP7Q08962 YLL032CYLL032C 2478 nt0.82□□□□□ -2.28
NIP7Q08962 CDC39YCR093W 6327 nt0.82□□□□□ -2.28
NIP7Q08962 RFX1YLR176C 2436 nt0.81□□□□□ -2.28
NIP7Q08962 YGR045CYGR045C 363 nt0.81□□□□□ -2.28
NIP7Q08962 MRPL31YKL138C 396 nt0.81□□□□□ -2.28
NIP7Q08962 YDR182W-AYDR182W-A 204 nt0.8□□□□□ -2.28
NIP7Q08962 STF2YGR008C 255 nt0.8□□□□□ -2.28
NIP7Q08962 NBL1YHR199C-A 222 nt0.8□□□□□ -2.28
NIP7Q08962 YIL059CYIL059C 366 nt0.8□□□□□ -2.28
NIP7Q08962 STE18YJR086W 333 nt0.8□□□□□ -2.28
NIP7Q08962 UPS1YLR193C 528 nt0.8□□□□□ -2.28
NIP7Q08962 YLR269CYLR269C 351 nt0.8□□□□□ -2.28
NIP7Q08962 YBR221W-AYBR221W-A 105 nt0.8□□□□□ -2.28
NIP7Q08962 SLY1YDR189W 2001 nt0.8□□□□□ -2.28
NIP7Q08962 BEM2YER155C 6504 nt0.79□□□□□ -2.28
NIP7Q08962 YDR269CYDR269C 324 nt0.79□□□□□ -2.28
NIP7Q08962 YER076W-AYER076W-A 348 nt0.79□□□□□ -2.28
NIP7Q08962 RPF1YHR088W 888 nt0.79□□□□□ -2.28
NIP7Q08962 YPL182CYPL182C 384 nt0.79□□□□□ -2.28
NIP7Q08962 PAU24YBR301W 363 nt0.79□□□□□ -2.28
NIP7Q08962 ENV11YGR071C 2583 nt0.79□□□□□ -2.28
NIP7Q08962 COG4YPR105C 2586 nt0.79□□□□□ -2.28
NIP7Q08962 FIG4YNL325C 2640 nt0.79□□□□□ -2.28
NIP7Q08962 SET3YKR029C 2256 nt0.78□□□□□ -2.28
NIP7Q08962 YEL050W-AYEL050W-A 192 nt0.78□□□□□ -2.28
NIP7Q08962 YIL066W-AYIL066W-A 444 nt0.78□□□□□ -2.28
NIP7Q08962 RPL16AYIL133C 600 nt0.78□□□□□ -2.28
NIP7Q08962 PHS1YJL097W 654 nt0.78□□□□□ -2.28
NIP7Q08962 PAM16YJL104W 450 nt0.78□□□□□ -2.28
NIP7Q08962 RPS27AYKL156W 249 nt0.78□□□□□ -2.28
NIP7Q08962 YBR076C-AYBR076C-A 267 nt0.78□□□□□ -2.28
NIP7Q08962 YBR200W-AYBR200W-A 165 nt0.78□□□□□ -2.28
NIP7Q08962 EMT1tM(CAU)D 73 nt0.77□□□□□ -2.29
NIP7Q08962 EMT5tM(CAU)J1 73 nt0.77□□□□□ -2.29
NIP7Q08962 EMT3tM(CAU)J2 73 nt0.77□□□□□ -2.29
NIP7Q08962 EMT4tM(CAU)M 73 nt0.77□□□□□ -2.29
NIP7Q08962 EMT2tM(CAU)O2 73 nt0.77□□□□□ -2.29
NIP7Q08962 IRC23YOR044W 474 nt0.77□□□□□ -2.29
NIP7Q08962 STO1YMR125W 2586 nt0.76□□□□□ -2.29
NIP7Q08962 EFR3YMR212C 2349 nt0.76□□□□□ -2.29
NIP7Q08962 LCD1YDR499W 2244 nt0.76□□□□□ -2.29
NIP7Q08962 CYC7YEL039C 342 nt0.76□□□□□ -2.29
NIP7Q08962 YER087C-AYER087C-A 552 nt0.76□□□□□ -2.29
NIP7Q08962 YML108WYML108W 318 nt0.76□□□□□ -2.29
NIP7Q08962 MMS4YBR098W 2076 nt0.76□□□□□ -2.29
NIP7Q08962 AIM9YER080W 1884 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms