Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RPB10YOR210W 213 nt2.45□□□□□ -2.02
YLR040CQ07988 PEP3YLR148W 2757 nt2.45□□□□□ -2.02
YLR040CQ07988 SMY2YBR172C 2223 nt2.45□□□□□ -2.02
YLR040CQ07988 MPT5YGL178W 2580 nt2.45□□□□□ -2.02
YLR040CQ07988 SEC26YDR238C 2922 nt2.44□□□□□ -2.02
YLR040CQ07988 SAP1YER047C 2694 nt2.44□□□□□ -2.02
YLR040CQ07988 YOR329W-AYOR329W-A 210 nt2.44□□□□□ -2.02
YLR040CQ07988 ACM1YPL267W 630 nt2.44□□□□□ -2.02
YLR040CQ07988 snR43snR43 209 nt2.44□□□□□ -2.02
YLR040CQ07988 CLN3YAL040C 1743 nt2.44□□□□□ -2.02
YLR040CQ07988 RPO41YFL036W 4056 nt2.44□□□□□ -2.02
YLR040CQ07988 MCM10YIL150C 1716 nt2.43□□□□□ -2.02
YLR040CQ07988 YDR003W-AYDR003W-A 123 nt2.43□□□□□ -2.02
YLR040CQ07988 YBT1YLL048C 4986 nt2.43□□□□□ -2.02
YLR040CQ07988 GCV2YMR189W 3105 nt2.42□□□□□ -2.02
YLR040CQ07988 TAE2YPL009C 3117 nt2.42□□□□□ -2.02
YLR040CQ07988 SRB8YCR081W 4284 nt2.42□□□□□ -2.02
YLR040CQ07988 RIC1YLR039C 3171 nt2.42□□□□□ -2.02
YLR040CQ07988 PSD2YGR170W 3417 nt2.42□□□□□ -2.02
YLR040CQ07988 SUL1YBR294W 2580 nt2.42□□□□□ -2.02
YLR040CQ07988 YPL150WYPL150W 2706 nt2.41□□□□□ -2.02
YLR040CQ07988 KAP123YER110C 3342 nt2.41□□□□□ -2.02
YLR040CQ07988 PMP1YCR024C-A 123 nt2.41□□□□□ -2.02
YLR040CQ07988 snR72snR72 98 nt2.41□□□□□ -2.02
YLR040CQ07988 RPL42BYHR141C 321 nt2.41□□□□□ -2.02
YLR040CQ07988 YNL114CYNL114C 372 nt2.41□□□□□ -2.02
YLR040CQ07988 RPL42AYNL162W 321 nt2.41□□□□□ -2.02
YLR040CQ07988 RPH1YER169W 2391 nt2.41□□□□□ -2.02
YLR040CQ07988 SGM1YJR134C 2124 nt2.4□□□□□ -2.03
YLR040CQ07988 RPS29AYLR388W 171 nt2.4□□□□□ -2.03
YLR040CQ07988 RPL33BYOR234C 324 nt2.4□□□□□ -2.03
YLR040CQ07988 ELG1YOR144C 2376 nt2.4□□□□□ -2.03
YLR040CQ07988 ESC1YMR219W 4977 nt2.4□□□□□ -2.03
YLR040CQ07988 NFT1YKR103W 3657 nt2.4□□□□□ -2.03
YLR040CQ07988 MRD1YPR112C 2664 nt2.39□□□□□ -2.03
YLR040CQ07988 FAR11YNL127W 2862 nt2.39□□□□□ -2.03
YLR040CQ07988 YLR154W-AYLR154W-A 186 nt2.39□□□□□ -2.03
YLR040CQ07988 YOR345CYOR345C 351 nt2.39□□□□□ -2.03
YLR040CQ07988 SLY1YDR189W 2001 nt2.39□□□□□ -2.03
YLR040CQ07988 YDR186CYDR186C 2634 nt2.38□□□□□ -2.03
YLR040CQ07988 HYP2YEL034W 474 nt2.38□□□□□ -2.03
YLR040CQ07988 SCH9YHR205W 2475 nt2.38□□□□□ -2.03
YLR040CQ07988 YHR210CYHR210C 1026 nt2.38□□□□□ -2.03
YLR040CQ07988 YIR044CYIR044C 186 nt2.38□□□□□ -2.03
YLR040CQ07988 YOR072W-BYOR072W-B 162 nt2.38□□□□□ -2.03
YLR040CQ07988 RFX1YLR176C 2436 nt2.38□□□□□ -2.03
YLR040CQ07988 MNL2YLR057W 2550 nt2.37□□□□□ -2.03
YLR040CQ07988 NUM1YDR150W 8247 nt2.37□□□□□ -2.03
YLR040CQ07988 KRE33YNL132W 3171 nt2.37□□□□□ -2.03
YLR040CQ07988 YIL080WYIL080W 4722 nt2.37□□□□□ -2.03
YLR040CQ07988 AFI1YOR129C 2682 nt2.36□□□□□ -2.03
YLR040CQ07988 VPS16YPL045W 2397 nt2.36□□□□□ -2.03
YLR040CQ07988 YGR050CYGR050C 357 nt2.36□□□□□ -2.03
YLR040CQ07988 YHR073W-AYHR073W-A 177 nt2.36□□□□□ -2.03
YLR040CQ07988 EMC6YLL014W 327 nt2.36□□□□□ -2.03
YLR040CQ07988 LCL1YPL056C 306 nt2.36□□□□□ -2.03
YLR040CQ07988 CRM1YGR218W 3255 nt2.36□□□□□ -2.03
YLR040CQ07988 SWI5YDR146C 2130 nt2.36□□□□□ -2.03
YLR040CQ07988 ARP8YOR141C 2646 nt2.36□□□□□ -2.03
YLR040CQ07988 FKS3YMR306W 5358 nt2.35□□□□□ -2.03
YLR040CQ07988 SNC1YAL030W 354 nt2.35□□□□□ -2.03
YLR040CQ07988 YBR277CYBR277C 402 nt2.35□□□□□ -2.03
YLR040CQ07988 PDR3YBL005W 2931 nt2.35□□□□□ -2.03
YLR040CQ07988 SIR3YLR442C 2937 nt2.35□□□□□ -2.03
YLR040CQ07988 STB4YMR019W 2850 nt2.34□□□□□ -2.03
YLR040CQ07988 MSC6YOR354C 2079 nt2.34□□□□□ -2.03
YLR040CQ07988 PDR1YGL013C 3207 nt2.34□□□□□ -2.03
YLR040CQ07988 YDR182W-AYDR182W-A 204 nt2.34□□□□□ -2.03
YLR040CQ07988 YBL012CYBL012C 402 nt2.34□□□□□ -2.03
YLR040CQ07988 NIP100YPL174C 2607 nt2.34□□□□□ -2.04
YLR040CQ07988 SPC98YNL126W 2541 nt2.33□□□□□ -2.04
YLR040CQ07988 SRP14YDL092W 441 nt2.33□□□□□ -2.04
YLR040CQ07988 YAL042C-AYAL042C-A 378 nt2.33□□□□□ -2.04
YLR040CQ07988 YBR174CYBR174C 315 nt2.33□□□□□ -2.04
YLR040CQ07988 SPO22YIL073C 2928 nt2.33□□□□□ -2.04
YLR040CQ07988 SWR1YDR334W 4545 nt2.33□□□□□ -2.04
YLR040CQ07988 SPO75YLL005C 2607 nt2.33□□□□□ -2.04
YLR040CQ07988 PTP3YER075C 2787 nt2.32□□□□□ -2.04
YLR040CQ07988 EDS1YBR033W 2760 nt2.32□□□□□ -2.04
YLR040CQ07988 AMS1YGL156W 3252 nt2.32□□□□□ -2.04
YLR040CQ07988 SDC25YLL016W 3147 nt2.32□□□□□ -2.04
YLR040CQ07988 RRP6YOR001W 2202 nt2.32□□□□□ -2.04
YLR040CQ07988 ACB1YGR037C 264 nt2.32□□□□□ -2.04
YLR040CQ07988 YHR071C-AYHR071C-A 321 nt2.32□□□□□ -2.04
YLR040CQ07988 CRS5YOR031W 210 nt2.32□□□□□ -2.04
YLR040CQ07988 COY1YKL179C 2040 nt2.32□□□□□ -2.04
YLR040CQ07988 VMR1YHL035C 4779 nt2.32□□□□□ -2.04
YLR040CQ07988 TFC8YPL007C 1767 nt2.31□□□□□ -2.04
YLR040CQ07988 SPO21YOL091W 1830 nt2.31□□□□□ -2.04
YLR040CQ07988 LYS14YDR034C 2373 nt2.3□□□□□ -2.04
YLR040CQ07988 RGA2YDR379W 3030 nt2.3□□□□□ -2.04
YLR040CQ07988 EMP24YGL200C 612 nt2.3□□□□□ -2.04
YLR040CQ07988 YOR055WYOR055W 435 nt2.3□□□□□ -2.04
YLR040CQ07988 YEF3YLR249W 3135 nt2.3□□□□□ -2.04
YLR040CQ07988 GIS1YDR096W 2685 nt2.29□□□□□ -2.04
YLR040CQ07988 TRA1YHR099W 11235 nt2.29□□□□□ -2.04
YLR040CQ07988 SLM1YIL105C 2061 nt2.29□□□□□ -2.04
YLR040CQ07988 PIG1YLR273C 1947 nt2.29□□□□□ -2.04
YLR040CQ07988 NCA2YPR155C 1851 nt2.29□□□□□ -2.04
YLR040CQ07988 BNR1YIL159W 4128 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms