Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 FYV10YIL097W 1551 nt-1.15□□□□□ -2.59
RKR1Q04781 ORC3YLL004W 1851 nt-1.16□□□□□ -2.59
RKR1Q04781 DAD1YDR016C 285 nt-1.16□□□□□ -2.59
RKR1Q04781 YBL029WYBL029W 1131 nt-1.16□□□□□ -2.59
RKR1Q04781 snR128snR128 126 nt-1.16□□□□□ -2.59
RKR1Q04781 NOC3YLR002C 1992 nt-1.16□□□□□ -2.6
RKR1Q04781 HNT1YDL125C 477 nt-1.17□□□□□ -2.6
RKR1Q04781 RUF22RUF22 515 nt-1.17□□□□□ -2.6
RKR1Q04781 FIG1YBR040W 897 nt-1.17□□□□□ -2.6
RKR1Q04781 NIP1YMR309C 2439 nt-1.17□□□□□ -2.6
RKR1Q04781 TIM10YHR005C-A 282 nt-1.18□□□□□ -2.6
RKR1Q04781 YGR265WYGR265W 411 nt-1.19□□□□□ -2.6
RKR1Q04781 YKL183C-AYKL183C-A 213 nt-1.19□□□□□ -2.6
RKR1Q04781 YLR252WYLR252W 306 nt-1.19□□□□□ -2.6
RKR1Q04781 YHR145CYHR145C 357 nt-1.2□□□□□ -2.6
RKR1Q04781 snR35snR35 204 nt-1.2□□□□□ -2.6
RKR1Q04781 YNL211CYNL211C 261 nt-1.21□□□□□ -2.6
RKR1Q04781 PHO92YDR374C 921 nt-1.21□□□□□ -2.6
RKR1Q04781 YBL094CYBL094C 333 nt-1.21□□□□□ -2.6
RKR1Q04781 YPL080CYPL080C 327 nt-1.21□□□□□ -2.6
RKR1Q04781 AME1YBR211C 975 nt-1.21□□□□□ -2.6
RKR1Q04781 ASE1YOR058C 2658 nt-1.22□□□□□ -2.6
RKR1Q04781 TAP42YMR028W 1101 nt-1.22□□□□□ -2.61
RKR1Q04781 YPR096CYPR096C 303 nt-1.22□□□□□ -2.61
RKR1Q04781 YIR018C-AYIR018C-A 138 nt-1.23□□□□□ -2.61
RKR1Q04781 NEJ1YLR265C 1029 nt-1.23□□□□□ -2.61
RKR1Q04781 YPR172WYPR172W 603 nt-1.23□□□□□ -2.61
RKR1Q04781 GSP1YLR293C 660 nt-1.24□□□□□ -2.61
RKR1Q04781 RPS10AYOR293W 318 nt-1.24□□□□□ -2.61
RKR1Q04781 YOL024WYOL024W 519 nt-1.25□□□□□ -2.61
RKR1Q04781 YJL127C-BYJL127C-B 159 nt-1.25□□□□□ -2.61
RKR1Q04781 YOR015WYOR015W 360 nt-1.25□□□□□ -2.61
RKR1Q04781 SPR2YOR214C 711 nt-1.25□□□□□ -2.61
RKR1Q04781 YCL002CYCL002C 792 nt-1.26□□□□□ -2.61
RKR1Q04781 YDR371C-AYDR371C-A 105 nt-1.27□□□□□ -2.61
RKR1Q04781 YLR402WYLR402W 192 nt-1.27□□□□□ -2.61
RKR1Q04781 BET5YML077W 480 nt-1.27□□□□□ -2.61
RKR1Q04781 LEE1YPL054W 906 nt-1.27□□□□□ -2.61
RKR1Q04781 SPO23YBR250W 1572 nt-1.28□□□□□ -2.61
RKR1Q04781 YJL156W-AYJL156W-A 222 nt-1.29□□□□□ -2.62
RKR1Q04781 AI5_ALPHAQ0070 1893 nt-1.31□□□□□ -2.62
RKR1Q04781 YLR458WYLR458W 381 nt-1.31□□□□□ -2.62
RKR1Q04781 MMS4YBR098W 2076 nt-1.32□□□□□ -2.62
RKR1Q04781 YLR282CYLR282C 342 nt-1.33□□□□□ -2.62
RKR1Q04781 RPS16AYMR143W 432 nt-1.33□□□□□ -2.62
RKR1Q04781 EST1YLR233C 2100 nt-1.34□□□□□ -2.62
RKR1Q04781 DIE2YGR227W 1578 nt-1.34□□□□□ -2.62
RKR1Q04781 snR68snR68 136 nt-1.34□□□□□ -2.62
RKR1Q04781 YDR029WYDR029W 315 nt-1.34□□□□□ -2.62
RKR1Q04781 HTB2YBL002W 396 nt-1.34□□□□□ -2.62
RKR1Q04781 GPX2YBR244W 489 nt-1.36□□□□□ -2.63
RKR1Q04781 NOT5YPR072W 1683 nt-1.37□□□□□ -2.63
RKR1Q04781 CHZ1YER030W 462 nt-1.37□□□□□ -2.63
RKR1Q04781 OLI1Q0130 231 nt-1.37□□□□□ -2.63
RKR1Q04781 RPS26AYGL189C 360 nt-1.38□□□□□ -2.63
RKR1Q04781 ERV14YGL054C 417 nt-1.38□□□□□ -2.63
RKR1Q04781 YKL111CYKL111C 336 nt-1.39□□□□□ -2.63
RKR1Q04781 YPL205CYPL205C 345 nt-1.4□□□□□ -2.63
RKR1Q04781 YKU70YMR284W 1809 nt-1.4□□□□□ -2.63
RKR1Q04781 AI3Q0060 1248 nt-1.42□□□□□ -2.64
RKR1Q04781 YDR199WYDR199W 366 nt-1.42□□□□□ -2.64
RKR1Q04781 MMS21YEL019C 804 nt-1.42□□□□□ -2.64
RKR1Q04781 BSC3YLR465C 309 nt-1.42□□□□□ -2.64
RKR1Q04781 SPO11YHL022C 1197 nt-1.42□□□□□ -2.64
RKR1Q04781 YHR139C-AYHR139C-A 312 nt-1.42□□□□□ -2.64
RKR1Q04781 MAM33YIL070C 801 nt-1.44□□□□□ -2.64
RKR1Q04781 CDC33YOL139C 642 nt-1.44□□□□□ -2.64
RKR1Q04781 ECM9YKR004C 1134 nt-1.46□□□□□ -2.64
RKR1Q04781 NTC20YBR188C 423 nt-1.46□□□□□ -2.64
RKR1Q04781 COX6YHR051W 447 nt-1.47□□□□□ -2.64
RKR1Q04781 YJL120WYJL120W 324 nt-1.47□□□□□ -2.64
RKR1Q04781 GEP7YGL057C 864 nt-1.47□□□□□ -2.65
RKR1Q04781 YHL042WYHL042W 453 nt-1.47□□□□□ -2.65
RKR1Q04781 YAL067W-AYAL067W-A 228 nt-1.47□□□□□ -2.65
RKR1Q04781 KAR1YNL188W 1302 nt-1.48□□□□□ -2.65
RKR1Q04781 MFA1YDR461W 111 nt-1.48□□□□□ -2.65
RKR1Q04781 TAR1YLR154W-C 375 nt-1.48□□□□□ -2.65
RKR1Q04781 UPS1YLR193C 528 nt-1.48□□□□□ -2.65
RKR1Q04781 YNL089CYNL089C 477 nt-1.48□□□□□ -2.65
RKR1Q04781 LCD1YDR499W 2244 nt-1.48□□□□□ -2.65
RKR1Q04781 COY1YKL179C 2040 nt-1.49□□□□□ -2.65
RKR1Q04781 YFL063WYFL063W 456 nt-1.5□□□□□ -2.65
RKR1Q04781 YCR090CYCR090C 549 nt-1.51□□□□□ -2.65
RKR1Q04781 HTB1YDR224C 396 nt-1.51□□□□□ -2.65
RKR1Q04781 YHR054CYHR054C 1065 nt-1.51□□□□□ -2.65
RKR1Q04781 COG1YGL223C 1254 nt-1.52□□□□□ -2.65
RKR1Q04781 YMR158W-BYMR158W-B 321 nt-1.52□□□□□ -2.65
RKR1Q04781 NUP82YJL061W 2142 nt-1.53□□□□□ -2.65
RKR1Q04781 RPL42AYNL162W 321 nt-1.53□□□□□ -2.65
RKR1Q04781 CSM4YPL200W 471 nt-1.53□□□□□ -2.65
RKR1Q04781 RMD6YEL072W 696 nt-1.54□□□□□ -2.66
RKR1Q04781 YER038W-AYER038W-A 381 nt-1.54□□□□□ -2.66
RKR1Q04781 MVB12YGR206W 306 nt-1.54□□□□□ -2.66
RKR1Q04781 YNL146WYNL146W 303 nt-1.55□□□□□ -2.66
RKR1Q04781 SST2YLR452C 2097 nt-1.56□□□□□ -2.66
RKR1Q04781 SRP14YDL092W 441 nt-1.58□□□□□ -2.66
RKR1Q04781 OST4YDL232W 111 nt-1.59□□□□□ -2.66
RKR1Q04781 YLR311CYLR311C 348 nt-1.59□□□□□ -2.66
RKR1Q04781 MRPS8YMR158W 468 nt-1.59□□□□□ -2.66
RKR1Q04781 YNR021WYNR021W 1215 nt-1.59□□□□□ -2.66
Retrieved 100 of 7,029 protein–RNA pairs in 41.8 ms