Protein–RNA interactions for Protein: Q04734

RIM9, pH-response regulator protein palI/RIM9, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM9Q04734 YAP3YHL009C 993 nt0.59□□□□□ -2.31
RIM9Q04734 CMC4YMR194C-B 222 nt0.59□□□□□ -2.31
RIM9Q04734 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
RIM9Q04734 YOL038C-AYOL038C-A 96 nt0.59□□□□□ -2.31
RIM9Q04734 YBR221W-AYBR221W-A 105 nt0.59□□□□□ -2.31
RIM9Q04734 QCR7YDR529C 384 nt0.58□□□□□ -2.32
RIM9Q04734 RPC10YHR143W-A 213 nt0.58□□□□□ -2.32
RIM9Q04734 NBL1YHR199C-A 222 nt0.58□□□□□ -2.32
RIM9Q04734 NUT2YPR168W 474 nt0.58□□□□□ -2.32
RIM9Q04734 YBR200W-AYBR200W-A 165 nt0.58□□□□□ -2.32
RIM9Q04734 YCL002CYCL002C 792 nt0.58□□□□□ -2.32
RIM9Q04734 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
RIM9Q04734 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
RIM9Q04734 URM1YIL008W 300 nt0.57□□□□□ -2.32
RIM9Q04734 YLR271WYLR271W 825 nt0.57□□□□□ -2.32
RIM9Q04734 YDL206WYDL206W 2289 nt0.57□□□□□ -2.32
RIM9Q04734 MKT1YNL085W 2493 nt0.56□□□□□ -2.32
RIM9Q04734 SET3YKR029C 2256 nt0.56□□□□□ -2.32
RIM9Q04734 PAN3YKL025C 2040 nt0.56□□□□□ -2.32
RIM9Q04734 WIP1YDR374W-A 270 nt0.56□□□□□ -2.32
RIM9Q04734 YER087C-AYER087C-A 552 nt0.56□□□□□ -2.32
RIM9Q04734 YBR071WYBR071W 636 nt0.56□□□□□ -2.32
RIM9Q04734 YPR099CYPR099C 357 nt0.56□□□□□ -2.32
RIM9Q04734 AI5_ALPHAQ0070 1893 nt0.56□□□□□ -2.32
RIM9Q04734 YDL073WYDL073W 2955 nt0.55□□□□□ -2.32
RIM9Q04734 YDR509WYDR509W 348 nt0.55□□□□□ -2.32
RIM9Q04734 SPO13YHR014W 876 nt0.55□□□□□ -2.32
RIM9Q04734 PXA2YKL188C 2562 nt0.55□□□□□ -2.32
RIM9Q04734 PRP16YKR086W 3216 nt0.55□□□□□ -2.32
RIM9Q04734 FIG4YNL325C 2640 nt0.55□□□□□ -2.32
RIM9Q04734 SCW11YGL028C 1629 nt0.54□□□□□ -2.32
RIM9Q04734 YDR114CYDR114C 303 nt0.54□□□□□ -2.32
RIM9Q04734 RUF22RUF22 515 nt0.54□□□□□ -2.32
RIM9Q04734 YBR121C-AYBR121C-A 159 nt0.54□□□□□ -2.32
RIM9Q04734 STO1YMR125W 2586 nt0.53□□□□□ -2.32
RIM9Q04734 ALY2YJL084C 3141 nt0.53□□□□□ -2.32
RIM9Q04734 YCR100CYCR100C 951 nt0.53□□□□□ -2.32
RIM9Q04734 snR9snR9 187 nt0.53□□□□□ -2.32
RIM9Q04734 MXR1YER042W 555 nt0.53□□□□□ -2.32
RIM9Q04734 YER188C-AYER188C-A 300 nt0.53□□□□□ -2.32
RIM9Q04734 YMR031W-AYMR031W-A 327 nt0.53□□□□□ -2.32
RIM9Q04734 YOR199WYOR199W 330 nt0.53□□□□□ -2.32
RIM9Q04734 CSM4YPL200W 471 nt0.53□□□□□ -2.32
RIM9Q04734 YPR159C-AYPR159C-A 102 nt0.53□□□□□ -2.32
RIM9Q04734 LYS14YDR034C 2373 nt0.52□□□□□ -2.33
RIM9Q04734 SEM1YDR363W-A 270 nt0.52□□□□□ -2.33
RIM9Q04734 MND1YGL183C 660 nt0.52□□□□□ -2.33
RIM9Q04734 BMT5YIL096C 1011 nt0.52□□□□□ -2.33
RIM9Q04734 SDH2YLL041C 801 nt0.52□□□□□ -2.33
RIM9Q04734 YMR153C-AYMR153C-A 336 nt0.52□□□□□ -2.33
RIM9Q04734 YMR254CYMR254C 309 nt0.52□□□□□ -2.33
RIM9Q04734 YBR032WYBR032W 303 nt0.52□□□□□ -2.33
RIM9Q04734 SPO23YBR250W 1572 nt0.52□□□□□ -2.33
RIM9Q04734 snR84snR84 550 nt0.51□□□□□ -2.33
RIM9Q04734 YDR008CYDR008C 351 nt0.51□□□□□ -2.33
RIM9Q04734 PDE2YOR360C 1581 nt0.51□□□□□ -2.33
RIM9Q04734 SLM6YBR266C 453 nt0.51□□□□□ -2.33
RIM9Q04734 YDL196WYDL196W 330 nt0.5□□□□□ -2.33
RIM9Q04734 YAL066WYAL066W 309 nt0.5□□□□□ -2.33
RIM9Q04734 MMS4YBR098W 2076 nt0.5□□□□□ -2.33
RIM9Q04734 YJR079WYJR079W 330 nt0.49□□□□□ -2.33
RIM9Q04734 ECM9YKR004C 1134 nt0.49□□□□□ -2.33
RIM9Q04734 SWI6YLR182W 2412 nt0.49□□□□□ -2.33
RIM9Q04734 SLY1YDR189W 2001 nt0.48□□□□□ -2.33
RIM9Q04734 SWF1YDR126W 1011 nt0.48□□□□□ -2.33
RIM9Q04734 SCEIQ0160 708 nt0.48□□□□□ -2.33
RIM9Q04734 UPS1YLR193C 528 nt0.48□□□□□ -2.33
RIM9Q04734 YOR218CYOR218C 420 nt0.48□□□□□ -2.33
RIM9Q04734 YBR063CYBR063C 1215 nt0.48□□□□□ -2.33
RIM9Q04734 RKR1YMR247C 4689 nt0.47□□□□□ -2.33
RIM9Q04734 PPN1YDR452W 2025 nt0.47□□□□□ -2.33
RIM9Q04734 TRS65YGR166W 1683 nt0.47□□□□□ -2.33
RIM9Q04734 OCA6YDR067C 675 nt0.47□□□□□ -2.33
RIM9Q04734 ALG13YGL047W 609 nt0.47□□□□□ -2.33
RIM9Q04734 UBC7YMR022W 498 nt0.47□□□□□ -2.33
RIM9Q04734 IES4YOR189W 351 nt0.47□□□□□ -2.33
RIM9Q04734 YOR248WYOR248W 303 nt0.47□□□□□ -2.33
RIM9Q04734 LCD1YDR499W 2244 nt0.47□□□□□ -2.33
RIM9Q04734 SLD3YGL113W 2007 nt0.47□□□□□ -2.33
RIM9Q04734 AFR1YDR085C 1863 nt0.46□□□□□ -2.34
RIM9Q04734 AFB1YLR040C 675 nt0.46□□□□□ -2.34
RIM9Q04734 YLR146W-AYLR146W-A 189 nt0.46□□□□□ -2.34
RIM9Q04734 YLR252WYLR252W 306 nt0.46□□□□□ -2.34
RIM9Q04734 GMC2YLR445W 567 nt0.46□□□□□ -2.34
RIM9Q04734 IPP1YBR011C 864 nt0.46□□□□□ -2.34
RIM9Q04734 YML002WYML002W 2214 nt0.46□□□□□ -2.34
RIM9Q04734 WAR1YML076C 2835 nt0.45□□□□□ -2.34
RIM9Q04734 YDR182W-AYDR182W-A 204 nt0.45□□□□□ -2.34
RIM9Q04734 YMR321CYMR321C 318 nt0.45□□□□□ -2.34
RIM9Q04734 YLL032CYLL032C 2478 nt0.44□□□□□ -2.34
RIM9Q04734 DBP6YNR038W 1890 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms