Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 YMR175W-AYMR175W-A 195 nt0.9□□□□□ -2.27
TRM9P49957 APL3YBL037W 3078 nt0.9□□□□□ -2.27
TRM9P49957 STB6YKL072W 2301 nt0.89□□□□□ -2.27
TRM9P49957 MKT1YNL085W 2493 nt0.89□□□□□ -2.27
TRM9P49957 YKL044WYKL044W 321 nt0.89□□□□□ -2.27
TRM9P49957 BER1YLR412W 825 nt0.89□□□□□ -2.27
TRM9P49957 YPR039WYPR039W 336 nt0.89□□□□□ -2.27
TRM9P49957 MPT5YGL178W 2580 nt0.88□□□□□ -2.27
TRM9P49957 SRP14YDL092W 441 nt0.88□□□□□ -2.27
TRM9P49957 snR14snR14 160 nt0.88□□□□□ -2.27
TRM9P49957 AIM44YPL158C 2277 nt0.88□□□□□ -2.27
TRM9P49957 SPO23YBR250W 1572 nt0.87□□□□□ -2.27
TRM9P49957 YGR045CYGR045C 363 nt0.87□□□□□ -2.27
TRM9P49957 PAU12YGR294W 363 nt0.87□□□□□ -2.27
TRM9P49957 HIT1YJR055W 495 nt0.87□□□□□ -2.27
TRM9P49957 YBR012CYBR012C 420 nt0.87□□□□□ -2.27
TRM9P49957 IRC16YPR038W 360 nt0.87□□□□□ -2.27
TRM9P49957 PAU24YBR301W 363 nt0.87□□□□□ -2.27
TRM9P49957 LYS14YDR034C 2373 nt0.87□□□□□ -2.27
TRM9P49957 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
TRM9P49957 SMC1YFL008W 3678 nt0.86□□□□□ -2.27
TRM9P49957 PHS1YJL097W 654 nt0.86□□□□□ -2.27
TRM9P49957 ILM1YJR118C 612 nt0.86□□□□□ -2.27
TRM9P49957 YLR146W-AYLR146W-A 189 nt0.86□□□□□ -2.27
TRM9P49957 YNL319WYNL319W 441 nt0.86□□□□□ -2.27
TRM9P49957 ERP4YOR016C 624 nt0.86□□□□□ -2.27
TRM9P49957 SVS1YPL163C 783 nt0.86□□□□□ -2.27
TRM9P49957 SWI6YLR182W 2412 nt0.86□□□□□ -2.27
TRM9P49957 KAP120YPL125W 3099 nt0.85□□□□□ -2.27
TRM9P49957 snR84snR84 550 nt0.85□□□□□ -2.27
TRM9P49957 YKL068W-AYKL068W-A 237 nt0.85□□□□□ -2.27
TRM9P49957 YMR153C-AYMR153C-A 336 nt0.85□□□□□ -2.27
TRM9P49957 YOR032W-AYOR032W-A 201 nt0.85□□□□□ -2.27
TRM9P49957 NUT2YPR168W 474 nt0.85□□□□□ -2.27
TRM9P49957 CDC39YCR093W 6327 nt0.84□□□□□ -2.27
TRM9P49957 OCA6YDR067C 675 nt0.84□□□□□ -2.27
TRM9P49957 YFL012WYFL012W 447 nt0.84□□□□□ -2.27
TRM9P49957 APQ13YJL075C 417 nt0.84□□□□□ -2.27
TRM9P49957 DOP1YDR141C 5097 nt0.84□□□□□ -2.28
TRM9P49957 BEM2YER155C 6504 nt0.83□□□□□ -2.28
TRM9P49957 BUD3YCL014W 4911 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)BtF(GAA)B 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)FtF(GAA)F 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)GtF(GAA)G 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)H1tF(GAA)H1 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)H2tF(GAA)H2 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)MtF(GAA)M 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)P1tF(GAA)P1 73 nt0.83□□□□□ -2.28
TRM9P49957 tF(GAA)P2tF(GAA)P2 73 nt0.83□□□□□ -2.28
TRM9P49957 YJR141WYJR141W 1044 nt0.83□□□□□ -2.28
TRM9P49957 YML009C-AYML009C-A 327 nt0.83□□□□□ -2.28
TRM9P49957 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
TRM9P49957 YJR003CYJR003C 1560 nt0.83□□□□□ -2.28
TRM9P49957 MET32YDR253C 576 nt0.82□□□□□ -2.28
TRM9P49957 RUF22RUF22 515 nt0.82□□□□□ -2.28
TRM9P49957 YOR072W-AYOR072W-A 249 nt0.82□□□□□ -2.28
TRM9P49957 AI5_ALPHAQ0070 1893 nt0.82□□□□□ -2.28
TRM9P49957 SCW11YGL028C 1629 nt0.82□□□□□ -2.28
TRM9P49957 SDH2YLL041C 801 nt0.81□□□□□ -2.28
TRM9P49957 IRC23YOR044W 474 nt0.81□□□□□ -2.28
TRM9P49957 YBR200W-AYBR200W-A 165 nt0.81□□□□□ -2.28
TRM9P49957 SAS3YBL052C 2496 nt0.81□□□□□ -2.28
TRM9P49957 NUP157YER105C 4176 nt0.8□□□□□ -2.28
TRM9P49957 QCR9YGR183C 201 nt0.8□□□□□ -2.28
TRM9P49957 RPL16AYIL133C 600 nt0.8□□□□□ -2.28
TRM9P49957 YIL142C-AYIL142C-A 333 nt0.8□□□□□ -2.28
TRM9P49957 YBR221W-AYBR221W-A 105 nt0.8□□□□□ -2.28
TRM9P49957 ALY2YJL084C 3141 nt0.8□□□□□ -2.28
TRM9P49957 PXA2YKL188C 2562 nt0.8□□□□□ -2.28
TRM9P49957 SET3YKR029C 2256 nt0.8□□□□□ -2.28
TRM9P49957 YDL016CYDL016C 303 nt0.79□□□□□ -2.28
TRM9P49957 CYC7YEL039C 342 nt0.79□□□□□ -2.28
TRM9P49957 RCN2YOR220W 798 nt0.79□□□□□ -2.28
TRM9P49957 ENV11YGR071C 2583 nt0.79□□□□□ -2.28
TRM9P49957 YLL032CYLL032C 2478 nt0.78□□□□□ -2.28
TRM9P49957 IFH1YLR223C 3258 nt0.78□□□□□ -2.28
TRM9P49957 AIM9YER080W 1884 nt0.78□□□□□ -2.28
TRM9P49957 RIM20YOR275C 1986 nt0.78□□□□□ -2.28
TRM9P49957 YIL059CYIL059C 366 nt0.78□□□□□ -2.28
TRM9P49957 UPS1YLR193C 528 nt0.78□□□□□ -2.28
TRM9P49957 YBL029C-AYBL029C-A 285 nt0.78□□□□□ -2.28
TRM9P49957 snR13snR13 124 nt0.78□□□□□ -2.28
TRM9P49957 SLY1YDR189W 2001 nt0.77□□□□□ -2.29
TRM9P49957 RFX1YLR176C 2436 nt0.77□□□□□ -2.29
TRM9P49957 HUR1YGL168W 333 nt0.77□□□□□ -2.29
TRM9P49957 YGL239CYGL239C 315 nt0.77□□□□□ -2.29
TRM9P49957 UBX4YMR067C 1251 nt0.77□□□□□ -2.29
TRM9P49957 YOR199WYOR199W 330 nt0.77□□□□□ -2.29
TRM9P49957 PDE2YOR360C 1581 nt0.77□□□□□ -2.29
TRM9P49957 MMS4YBR098W 2076 nt0.77□□□□□ -2.29
TRM9P49957 FIG4YNL325C 2640 nt0.76□□□□□ -2.29
TRM9P49957 YCK3YER123W 1575 nt0.76□□□□□ -2.29
TRM9P49957 MXR1YER042W 555 nt0.76□□□□□ -2.29
TRM9P49957 YGR025WYGR025W 303 nt0.76□□□□□ -2.29
TRM9P49957 STO1YMR125W 2586 nt0.76□□□□□ -2.29
TRM9P49957 YDL206WYDL206W 2289 nt0.76□□□□□ -2.29
TRM9P49957 SNU56YDR240C 1479 nt0.75□□□□□ -2.29
TRM9P49957 HMLALPHA2YCL067C 633 nt0.75□□□□□ -2.29
TRM9P49957 MATALPHA2YCR039C 633 nt0.75□□□□□ -2.29
TRM9P49957 YDR182W-AYDR182W-A 204 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms