Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 MRP10YDL045W-A 288 nt2.4□□□□□ -2.03
SDP1P40479 EMP24YGL200C 612 nt2.4□□□□□ -2.03
SDP1P40479 YNL097C-BYNL097C-B 123 nt2.4□□□□□ -2.03
SDP1P40479 YOR218CYOR218C 420 nt2.4□□□□□ -2.03
SDP1P40479 YNL018CYNL018C 1839 nt2.4□□□□□ -2.03
SDP1P40479 LYS14YDR034C 2373 nt2.39□□□□□ -2.03
SDP1P40479 YDR239CYDR239C 2364 nt2.39□□□□□ -2.03
SDP1P40479 RPS27BYHR021C 249 nt2.39□□□□□ -2.03
SDP1P40479 YHR071C-AYHR071C-A 321 nt2.39□□□□□ -2.03
SDP1P40479 PAU8YAL068C 363 nt2.39□□□□□ -2.03
SDP1P40479 PAU18YLL064C 363 nt2.39□□□□□ -2.03
SDP1P40479 PAU6YNR076W 363 nt2.39□□□□□ -2.03
SDP1P40479 PAU20YOL161C 363 nt2.39□□□□□ -2.03
SDP1P40479 SGF11YPL047W 300 nt2.39□□□□□ -2.03
SDP1P40479 YBR131C-AYBR131C-A 90 nt2.39□□□□□ -2.03
SDP1P40479 VTC3YPL019C 2508 nt2.39□□□□□ -2.03
SDP1P40479 CLN3YAL040C 1743 nt2.38□□□□□ -2.03
SDP1P40479 MMS22YLR320W 4365 nt2.38□□□□□ -2.03
SDP1P40479 NIP100YPL174C 2607 nt2.38□□□□□ -2.03
SDP1P40479 TOR1YJR066W 7413 nt2.37□□□□□ -2.03
SDP1P40479 SRB8YCR081W 4284 nt2.37□□□□□ -2.03
SDP1P40479 SRO77YBL106C 3033 nt2.37□□□□□ -2.03
SDP1P40479 HYP2YEL034W 474 nt2.37□□□□□ -2.03
SDP1P40479 ACM1YPL267W 630 nt2.37□□□□□ -2.03
SDP1P40479 SAP1YER047C 2694 nt2.37□□□□□ -2.03
SDP1P40479 MRD1YPR112C 2664 nt2.37□□□□□ -2.03
SDP1P40479 RPO41YFL036W 4056 nt2.37□□□□□ -2.03
SDP1P40479 SPC98YNL126W 2541 nt2.36□□□□□ -2.03
SDP1P40479 YPL150WYPL150W 2706 nt2.36□□□□□ -2.03
SDP1P40479 SIR3YLR442C 2937 nt2.36□□□□□ -2.03
SDP1P40479 SDH6YDR379C-A 240 nt2.36□□□□□ -2.03
SDP1P40479 Q0143Q0143 153 nt2.36□□□□□ -2.03
SDP1P40479 YBL012CYBL012C 402 nt2.36□□□□□ -2.03
SDP1P40479 YCL046WYCL046W 324 nt2.36□□□□□ -2.03
SDP1P40479 MSB2YGR014W 3921 nt2.36□□□□□ -2.03
SDP1P40479 ESC1YMR219W 4977 nt2.36□□□□□ -2.03
SDP1P40479 SWA2YDR320C 2007 nt2.35□□□□□ -2.03
SDP1P40479 SGM1YJR134C 2124 nt2.35□□□□□ -2.03
SDP1P40479 SRP14YDL092W 441 nt2.35□□□□□ -2.03
SDP1P40479 snR46snR46 197 nt2.35□□□□□ -2.03
SDP1P40479 snR52snR52 92 nt2.35□□□□□ -2.03
SDP1P40479 FAR11YNL127W 2862 nt2.35□□□□□ -2.03
SDP1P40479 ORC2YBR060C 1863 nt2.34□□□□□ -2.03
SDP1P40479 SEC26YDR238C 2922 nt2.34□□□□□ -2.04
SDP1P40479 ULI1YFR026C 510 nt2.33□□□□□ -2.04
SDP1P40479 YGL063C-AYGL063C-A 150 nt2.33□□□□□ -2.04
SDP1P40479 RPS29AYLR388W 171 nt2.33□□□□□ -2.04
SDP1P40479 MCM10YIL150C 1716 nt2.33□□□□□ -2.04
SDP1P40479 SMC6YLR383W 3345 nt2.33□□□□□ -2.04
SDP1P40479 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
SDP1P40479 PSD2YGR170W 3417 nt2.33□□□□□ -2.04
SDP1P40479 UBR1YGR184C 5853 nt2.33□□□□□ -2.04
SDP1P40479 MSC6YOR354C 2079 nt2.32□□□□□ -2.04
SDP1P40479 KRE33YNL132W 3171 nt2.32□□□□□ -2.04
SDP1P40479 LRE1YCL051W 1752 nt2.32□□□□□ -2.04
SDP1P40479 YDR003W-AYDR003W-A 123 nt2.32□□□□□ -2.04
SDP1P40479 ECM12YHR021W-A 456 nt2.32□□□□□ -2.04
SDP1P40479 COA4YLR218C 453 nt2.32□□□□□ -2.04
SDP1P40479 YPL216WYPL216W 3309 nt2.32□□□□□ -2.04
SDP1P40479 IRA2YOL081W 9240 nt2.32□□□□□ -2.04
SDP1P40479 SPO75YLL005C 2607 nt2.31□□□□□ -2.04
SDP1P40479 MNE1YOR350C 1992 nt2.31□□□□□ -2.04
SDP1P40479 BUB1YGR188C 3066 nt2.31□□□□□ -2.04
SDP1P40479 ZRG17YNR039C 1818 nt2.31□□□□□ -2.04
SDP1P40479 ARP8YOR141C 2646 nt2.3□□□□□ -2.04
SDP1P40479 ELG1YOR144C 2376 nt2.3□□□□□ -2.04
SDP1P40479 SPO21YOL091W 1830 nt2.28□□□□□ -2.04
SDP1P40479 FLO11YIR019C 4104 nt2.28□□□□□ -2.04
SDP1P40479 YCR102W-AYCR102W-A 198 nt2.28□□□□□ -2.04
SDP1P40479 DBP10YDL031W 2988 nt2.28□□□□□ -2.04
SDP1P40479 YDR182W-AYDR182W-A 204 nt2.28□□□□□ -2.04
SDP1P40479 YGR164WYGR164W 336 nt2.28□□□□□ -2.04
SDP1P40479 RPL34BYIL052C 366 nt2.28□□□□□ -2.04
SDP1P40479 LCL1YPL056C 306 nt2.28□□□□□ -2.04
SDP1P40479 ESL2YKR096W 3588 nt2.28□□□□□ -2.04
SDP1P40479 TRS130YMR218C 3309 nt2.28□□□□□ -2.04
SDP1P40479 FKS3YMR306W 5358 nt2.28□□□□□ -2.04
SDP1P40479 RLM1YPL089C 2031 nt2.27□□□□□ -2.05
SDP1P40479 NOP14YDL148C 2433 nt2.27□□□□□ -2.05
SDP1P40479 NUP100YKL068W 2880 nt2.27□□□□□ -2.05
SDP1P40479 YMR242W-AYMR242W-A 90 nt2.27□□□□□ -2.05
SDP1P40479 YOR072W-BYOR072W-B 162 nt2.27□□□□□ -2.05
SDP1P40479 TFC8YPL007C 1767 nt2.27□□□□□ -2.05
SDP1P40479 PUT3YKL015W 2940 nt2.27□□□□□ -2.05
SDP1P40479 TCB2YNL087W 3537 nt2.26□□□□□ -2.05
SDP1P40479 MET18YIL128W 3099 nt2.26□□□□□ -2.05
SDP1P40479 ZIP1YDR285W 2628 nt2.26□□□□□ -2.05
SDP1P40479 COF1YLL050C 432 nt2.26□□□□□ -2.05
SDP1P40479 YLR154W-AYLR154W-A 186 nt2.26□□□□□ -2.05
SDP1P40479 YOR055WYOR055W 435 nt2.26□□□□□ -2.05
SDP1P40479 YOR381W-AYOR381W-A 168 nt2.26□□□□□ -2.05
SDP1P40479 YBR174CYBR174C 315 nt2.26□□□□□ -2.05
SDP1P40479 DCP2YNL118C 2913 nt2.26□□□□□ -2.05
SDP1P40479 ZIP2YGL249W 2115 nt2.25□□□□□ -2.05
SDP1P40479 ATP7YKL016C 525 nt2.25□□□□□ -2.05
SDP1P40479 RPS25BYLR333C 327 nt2.25□□□□□ -2.05
SDP1P40479 PDR1YGL013C 3207 nt2.25□□□□□ -2.05
SDP1P40479 GIP3YPL137C 3831 nt2.24□□□□□ -2.05
SDP1P40479 SAS3YBL052C 2496 nt2.24□□□□□ -2.05
SDP1P40479 VTC1YER072W 390 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms