Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YOR161W-BYOR161W-B 261 nt1□□□□□ -2.25
SSH1P38353 snR14snR14 160 nt1□□□□□ -2.25
SSH1P38353 YPR063CYPR063C 423 nt1□□□□□ -2.25
SSH1P38353 PXA2YKL188C 2562 nt1□□□□□ -2.25
SSH1P38353 MKT1YNL085W 2493 nt0.99□□□□□ -2.25
SSH1P38353 YCR001WYCR001W 315 nt0.99□□□□□ -2.25
SSH1P38353 YLL020CYLL020C 306 nt0.99□□□□□ -2.25
SSH1P38353 SEC5YDR166C 2916 nt0.99□□□□□ -2.25
SSH1P38353 DCP2YNL118C 2913 nt0.99□□□□□ -2.25
SSH1P38353 APL3YBL037W 3078 nt0.98□□□□□ -2.25
SSH1P38353 STB6YKL072W 2301 nt0.98□□□□□ -2.25
SSH1P38353 YGL239CYGL239C 315 nt0.98□□□□□ -2.25
SSH1P38353 NFU1YKL040C 771 nt0.98□□□□□ -2.25
SSH1P38353 YLR269CYLR269C 351 nt0.98□□□□□ -2.25
SSH1P38353 PBI2YNL015W 228 nt0.98□□□□□ -2.25
SSH1P38353 TSC3YBR058C-A 243 nt0.98□□□□□ -2.25
SSH1P38353 GDS1YOR355W 1569 nt0.98□□□□□ -2.25
SSH1P38353 MUK1YPL070W 1839 nt0.98□□□□□ -2.25
SSH1P38353 SGO1YOR073W 1773 nt0.98□□□□□ -2.25
SSH1P38353 EAF1YDR359C 2949 nt0.98□□□□□ -2.25
SSH1P38353 ZIP1YDR285W 2628 nt0.98□□□□□ -2.25
SSH1P38353 VPS54YDR027C 2670 nt0.97□□□□□ -2.25
SSH1P38353 NBL1YHR199C-A 222 nt0.97□□□□□ -2.25
SSH1P38353 URM1YIL008W 300 nt0.97□□□□□ -2.25
SSH1P38353 YBR076C-AYBR076C-A 267 nt0.97□□□□□ -2.25
SSH1P38353 SPO75YLL005C 2607 nt0.97□□□□□ -2.25
SSH1P38353 YDR182W-AYDR182W-A 204 nt0.96□□□□□ -2.26
SSH1P38353 YEL050W-AYEL050W-A 192 nt0.96□□□□□ -2.26
SSH1P38353 tV(UAC)BtV(UAC)B 74 nt0.96□□□□□ -2.26
SSH1P38353 tV(UAC)DtV(UAC)D 74 nt0.96□□□□□ -2.26
SSH1P38353 YMR153C-AYMR153C-A 336 nt0.96□□□□□ -2.26
SSH1P38353 NUT2YPR168W 474 nt0.96□□□□□ -2.26
SSH1P38353 SEC3YER008C 4011 nt0.96□□□□□ -2.26
SSH1P38353 SPT7YBR081C 3999 nt0.96□□□□□ -2.26
SSH1P38353 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
SSH1P38353 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
SSH1P38353 SIP4YJL089W 2490 nt0.95□□□□□ -2.26
SSH1P38353 YDR114CYDR114C 303 nt0.95□□□□□ -2.26
SSH1P38353 YGR045CYGR045C 363 nt0.95□□□□□ -2.26
SSH1P38353 RPF1YHR088W 888 nt0.95□□□□□ -2.26
SSH1P38353 YLR146W-AYLR146W-A 189 nt0.95□□□□□ -2.26
SSH1P38353 YGR130CYGR130C 2451 nt0.95□□□□□ -2.26
SSH1P38353 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
SSH1P38353 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
SSH1P38353 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
SSH1P38353 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
SSH1P38353 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
SSH1P38353 RUF22RUF22 515 nt0.94□□□□□ -2.26
SSH1P38353 RPL9BYNL067W 576 nt0.94□□□□□ -2.26
SSH1P38353 SPT21YMR179W 2277 nt0.94□□□□□ -2.26
SSH1P38353 YMR175W-AYMR175W-A 195 nt0.93□□□□□ -2.26
SSH1P38353 NOC3YLR002C 1992 nt0.92□□□□□ -2.26
SSH1P38353 IFH1YLR223C 3258 nt0.92□□□□□ -2.26
SSH1P38353 APL2YKL135C 2181 nt0.92□□□□□ -2.26
SSH1P38353 YDR169C-AYDR169C-A 150 nt0.92□□□□□ -2.26
SSH1P38353 PHS1YJL097W 654 nt0.92□□□□□ -2.26
SSH1P38353 AIM29YKR074W 468 nt0.92□□□□□ -2.26
SSH1P38353 YML108WYML108W 318 nt0.92□□□□□ -2.26
SSH1P38353 PIP2YOR363C 2991 nt0.92□□□□□ -2.26
SSH1P38353 YLL032CYLL032C 2478 nt0.92□□□□□ -2.26
SSH1P38353 YLL054CYLL054C 2532 nt0.91□□□□□ -2.26
SSH1P38353 ALY2YJL084C 3141 nt0.91□□□□□ -2.26
SSH1P38353 YIL066W-AYIL066W-A 444 nt0.91□□□□□ -2.26
SSH1P38353 RPL16AYIL133C 600 nt0.91□□□□□ -2.26
SSH1P38353 YAL016C-BYAL016C-B 186 nt0.91□□□□□ -2.26
SSH1P38353 YML003WYML003W 873 nt0.91□□□□□ -2.26
SSH1P38353 RFX1YLR176C 2436 nt0.91□□□□□ -2.26
SSH1P38353 YEL030C-AYEL030C-A 315 nt0.9□□□□□ -2.27
SSH1P38353 YER076W-AYER076W-A 348 nt0.9□□□□□ -2.27
SSH1P38353 RTT102YGR275W 474 nt0.9□□□□□ -2.27
SSH1P38353 YNL122CYNL122C 348 nt0.9□□□□□ -2.27
SSH1P38353 snR189snR189 189 nt0.9□□□□□ -2.27
SSH1P38353 TTI1YKL033W 3117 nt0.9□□□□□ -2.27
SSH1P38353 AI5_ALPHAQ0070 1893 nt0.89□□□□□ -2.27
SSH1P38353 WIP1YDR374W-A 270 nt0.89□□□□□ -2.27
SSH1P38353 YHR125WYHR125W 306 nt0.89□□□□□ -2.27
SSH1P38353 IML1YJR138W 4755 nt0.89□□□□□ -2.27
SSH1P38353 NUP145YGL092W 3954 nt0.89□□□□□ -2.27
SSH1P38353 PRP16YKR086W 3216 nt0.88□□□□□ -2.27
SSH1P38353 YER087C-AYER087C-A 552 nt0.88□□□□□ -2.27
SSH1P38353 MRPL31YKL138C 396 nt0.88□□□□□ -2.27
SSH1P38353 SDH2YLL041C 801 nt0.88□□□□□ -2.27
SSH1P38353 CDC33YOL139C 642 nt0.88□□□□□ -2.27
SSH1P38353 YBR012CYBR012C 420 nt0.88□□□□□ -2.27
SSH1P38353 YPL182CYPL182C 384 nt0.88□□□□□ -2.27
SSH1P38353 SET3YKR029C 2256 nt0.88□□□□□ -2.27
SSH1P38353 MPT5YGL178W 2580 nt0.87□□□□□ -2.27
SSH1P38353 YDL073WYDL073W 2955 nt0.87□□□□□ -2.27
SSH1P38353 YDR269CYDR269C 324 nt0.87□□□□□ -2.27
SSH1P38353 BI2Q0110 1272 nt0.87□□□□□ -2.27
SSH1P38353 YHR130CYHR130C 336 nt0.87□□□□□ -2.27
SSH1P38353 FYV7YLR068W 456 nt0.87□□□□□ -2.27
SSH1P38353 UPS1YLR193C 528 nt0.87□□□□□ -2.27
SSH1P38353 HCH1YNL281W 462 nt0.87□□□□□ -2.27
SSH1P38353 YOR192C-CYOR192C-C 237 nt0.87□□□□□ -2.27
SSH1P38353 YBR221W-AYBR221W-A 105 nt0.87□□□□□ -2.27
SSH1P38353 SWI6YLR182W 2412 nt0.87□□□□□ -2.27
SSH1P38353 BEM2YER155C 6504 nt0.87□□□□□ -2.27
SSH1P38353 NUP157YER105C 4176 nt0.86□□□□□ -2.27
SSH1P38353 SCW11YGL028C 1629 nt0.86□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms