Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 YNL198CYNL198C 303 nt1.87□□□□□ -2.11
RPL42BP0CX28 EDS1YBR033W 2760 nt1.87□□□□□ -2.11
RPL42BP0CX28 YEF3YLR249W 3135 nt1.87□□□□□ -2.11
RPL42BP0CX28 NPR2YEL062W 1848 nt1.87□□□□□ -2.11
RPL42BP0CX28 LYS14YDR034C 2373 nt1.86□□□□□ -2.11
RPL42BP0CX28 ISD11YER048W-A 285 nt1.86□□□□□ -2.11
RPL42BP0CX28 PAU8YAL068C 363 nt1.86□□□□□ -2.11
RPL42BP0CX28 YLR294CYLR294C 330 nt1.86□□□□□ -2.11
RPL42BP0CX28 PAU20YOL161C 363 nt1.86□□□□□ -2.11
RPL42BP0CX28 TFC8YPL007C 1767 nt1.85□□□□□ -2.11
RPL42BP0CX28 KRE33YNL132W 3171 nt1.85□□□□□ -2.11
RPL42BP0CX28 tF(GAA)QtF(GAA)Q 75 nt1.85□□□□□ -2.11
RPL42BP0CX28 YJL135WYJL135W 318 nt1.85□□□□□ -2.11
RPL42BP0CX28 PFD1YJL179W 330 nt1.85□□□□□ -2.11
RPL42BP0CX28 PAU18YLL064C 363 nt1.85□□□□□ -2.11
RPL42BP0CX28 COX14YML129C 213 nt1.85□□□□□ -2.11
RPL42BP0CX28 YMR321CYMR321C 318 nt1.85□□□□□ -2.11
RPL42BP0CX28 PAU6YNR076W 363 nt1.85□□□□□ -2.11
RPL42BP0CX28 PDE2YOR360C 1581 nt1.85□□□□□ -2.11
RPL42BP0CX28 PHO2YDL106C 1680 nt1.84□□□□□ -2.11
RPL42BP0CX28 SSD1YDR293C 3753 nt1.84□□□□□ -2.11
RPL42BP0CX28 YHR071C-AYHR071C-A 321 nt1.84□□□□□ -2.11
RPL42BP0CX28 YLR154W-AYLR154W-A 186 nt1.84□□□□□ -2.11
RPL42BP0CX28 SCD5YOR329C 2619 nt1.84□□□□□ -2.12
RPL42BP0CX28 SIR3YLR442C 2937 nt1.84□□□□□ -2.12
RPL42BP0CX28 BNI1YNL271C 5862 nt1.83□□□□□ -2.12
RPL42BP0CX28 snR72snR72 98 nt1.83□□□□□ -2.12
RPL42BP0CX28 INA22YIR024C 651 nt1.83□□□□□ -2.12
RPL42BP0CX28 YJL182CYJL182C 318 nt1.83□□□□□ -2.12
RPL42BP0CX28 RPS17AYML024W 411 nt1.83□□□□□ -2.12
RPL42BP0CX28 YOR015WYOR015W 360 nt1.83□□□□□ -2.12
RPL42BP0CX28 ORC2YBR060C 1863 nt1.83□□□□□ -2.12
RPL42BP0CX28 CSF1YLR087C 8877 nt1.83□□□□□ -2.12
RPL42BP0CX28 UBR1YGR184C 5853 nt1.83□□□□□ -2.12
RPL42BP0CX28 YOR302WYOR302W 78 nt1.82□□□□□ -2.12
RPL42BP0CX28 NEW1YPL226W 3591 nt1.82□□□□□ -2.12
RPL42BP0CX28 CLN3YAL040C 1743 nt1.82□□□□□ -2.12
RPL42BP0CX28 ZRG17YNR039C 1818 nt1.82□□□□□ -2.12
RPL42BP0CX28 YOL098CYOL098C 3114 nt1.82□□□□□ -2.12
RPL42BP0CX28 NIP100YPL174C 2607 nt1.81□□□□□ -2.12
RPL42BP0CX28 TOF1YNL273W 3717 nt1.81□□□□□ -2.12
RPL42BP0CX28 YDL185C-AYDL185C-A 228 nt1.81□□□□□ -2.12
RPL42BP0CX28 VPS55YJR044C 423 nt1.81□□□□□ -2.12
RPL42BP0CX28 YOR011W-AYOR011W-A 207 nt1.81□□□□□ -2.12
RPL42BP0CX28 YCL046WYCL046W 324 nt1.81□□□□□ -2.12
RPL42BP0CX28 DCP2YNL118C 2913 nt1.81□□□□□ -2.12
RPL42BP0CX28 VPS54YDR027C 2670 nt1.81□□□□□ -2.12
RPL42BP0CX28 STE11YLR362W 2154 nt1.81□□□□□ -2.12
RPL42BP0CX28 TRL1YJL087C 2484 nt1.8□□□□□ -2.12
RPL42BP0CX28 RRT15YLR162W-A 189 nt1.8□□□□□ -2.12
RPL42BP0CX28 YLR466C-BYLR466C-B 117 nt1.8□□□□□ -2.12
RPL42BP0CX28 ZIP1YDR285W 2628 nt1.8□□□□□ -2.12
RPL42BP0CX28 UBP15YMR304W 3693 nt1.8□□□□□ -2.12
RPL42BP0CX28 PHO91YNR013C 2685 nt1.79□□□□□ -2.12
RPL42BP0CX28 CDC60YPL160W 3273 nt1.79□□□□□ -2.12
RPL42BP0CX28 YDR003W-AYDR003W-A 123 nt1.79□□□□□ -2.12
RPL42BP0CX28 YBL012CYBL012C 402 nt1.79□□□□□ -2.12
RPL42BP0CX28 YOL160WYOL160W 342 nt1.79□□□□□ -2.12
RPL42BP0CX28 MPT5YGL178W 2580 nt1.78□□□□□ -2.12
RPL42BP0CX28 YDR341CYDR341C 1824 nt1.78□□□□□ -2.12
RPL42BP0CX28 SRP14YDL092W 441 nt1.78□□□□□ -2.12
RPL42BP0CX28 BRP1YGL007W 378 nt1.78□□□□□ -2.12
RPL42BP0CX28 YHR032W-AYHR032W-A 180 nt1.78□□□□□ -2.12
RPL42BP0CX28 YKL165C-AYKL165C-A 234 nt1.78□□□□□ -2.12
RPL42BP0CX28 NOP14YDL148C 2433 nt1.78□□□□□ -2.12
RPL42BP0CX28 MAK10YEL053C 2202 nt1.78□□□□□ -2.13
RPL42BP0CX28 RTT107YHR154W 3213 nt1.78□□□□□ -2.13
RPL42BP0CX28 TOR2YKL203C 7425 nt1.77□□□□□ -2.13
RPL42BP0CX28 YGR151CYGR151C 336 nt1.77□□□□□ -2.13
RPL42BP0CX28 RPS27BYHR021C 249 nt1.77□□□□□ -2.13
RPL42BP0CX28 YIL156W-BYIL156W-B 222 nt1.77□□□□□ -2.13
RPL42BP0CX28 YOR108C-AYOR108C-A 210 nt1.77□□□□□ -2.13
RPL42BP0CX28 YOR218CYOR218C 420 nt1.77□□□□□ -2.13
RPL42BP0CX28 YPR092WYPR092W 306 nt1.77□□□□□ -2.13
RPL42BP0CX28 AI5_ALPHAQ0070 1893 nt1.77□□□□□ -2.13
RPL42BP0CX28 SPC98YNL126W 2541 nt1.77□□□□□ -2.13
RPL42BP0CX28 SAS3YBL052C 2496 nt1.77□□□□□ -2.13
RPL42BP0CX28 STH1YIL126W 4080 nt1.76□□□□□ -2.13
RPL42BP0CX28 SEC5YDR166C 2916 nt1.76□□□□□ -2.13
RPL42BP0CX28 YRB1YDR002W 606 nt1.76□□□□□ -2.13
RPL42BP0CX28 YEL014CYEL014C 306 nt1.76□□□□□ -2.13
RPL42BP0CX28 YER088C-AYER088C-A 324 nt1.76□□□□□ -2.13
RPL42BP0CX28 OLI1Q0130 231 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)G1tW(CCA)G1 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)G2tW(CCA)G2 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)JtW(CCA)J 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)KtW(CCA)K 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)MtW(CCA)M 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 tW(CCA)PtW(CCA)P 72 nt1.76□□□□□ -2.13
RPL42BP0CX28 SYH1YPL105C 2550 nt1.76□□□□□ -2.13
RPL42BP0CX28 GIP3YPL137C 3831 nt1.76□□□□□ -2.13
RPL42BP0CX28 PET309YLR067C 2898 nt1.76□□□□□ -2.13
RPL42BP0CX28 NAM7YMR080C 2916 nt1.75□□□□□ -2.13
RPL42BP0CX28 RAV1YJR033C 4074 nt1.75□□□□□ -2.13
RPL42BP0CX28 RSE1YML049C 4086 nt1.75□□□□□ -2.13
RPL42BP0CX28 MSC6YOR354C 2079 nt1.75□□□□□ -2.13
RPL42BP0CX28 TIM9YEL020W-A 264 nt1.75□□□□□ -2.13
RPL42BP0CX28 YMR242W-AYMR242W-A 90 nt1.75□□□□□ -2.13
RPL42BP0CX28 SGS1YMR190C 4344 nt1.75□□□□□ -2.13
RPL42BP0CX28 DNA2YHR164C 4569 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 99.5 ms