Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 AL049637.2-201ENST00000641778 930 ntBASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.32■■□□□ 1.64
SH3TC1Q8TE82 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 AL049796.1-201ENST00000565336 1766 ntBASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3TC1Q8TE82 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 AL135905.2-201ENST00000584934 1404 ntBASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 TSPY7P-201ENST00000431358 1114 ntBASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.3■■□□□ 1.64
SH3TC1Q8TE82 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 PRKY-204ENST00000533551 1019 ntBASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 RARRES2P10-201ENST00000564312 460 ntBASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3TC1Q8TE82 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 AC026310.3-201ENST00000625186 2373 ntBASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 AP001412.1-201ENST00000608405 714 ntBASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3TC1Q8TE82 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 AC121338.2-201ENST00000622535 1744 ntBASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms