Protein–RNA interactions for Protein: Q08919

TRE1, Uncharacterized protein TRE1, yeastyeast

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRE1Q08919 VPS35YJL154C 2835 nt2.9□□□□□ -1.94
TRE1Q08919 YEL073CYEL073C 324 nt2.9□□□□□ -1.95
TRE1Q08919 ECM12YHR021W-A 456 nt2.9□□□□□ -1.95
TRE1Q08919 INP52YNL106C 3552 nt2.9□□□□□ -1.95
TRE1Q08919 YAT2YER024W 2772 nt2.9□□□□□ -1.95
TRE1Q08919 YBR184WYBR184W 1572 nt2.9□□□□□ -1.95
TRE1Q08919 MPT5YGL178W 2580 nt2.9□□□□□ -1.95
TRE1Q08919 YDR003W-AYDR003W-A 123 nt2.89□□□□□ -1.95
TRE1Q08919 RIF1YBR275C 5751 nt2.89□□□□□ -1.95
TRE1Q08919 VPH1YOR270C 2523 nt2.89□□□□□ -1.95
TRE1Q08919 INP2YMR163C 2118 nt2.89□□□□□ -1.95
TRE1Q08919 ESL1YIL151C 3357 nt2.88□□□□□ -1.95
TRE1Q08919 RPS22AYJL190C 393 nt2.88□□□□□ -1.95
TRE1Q08919 MOT1YPL082C 5604 nt2.87□□□□□ -1.95
TRE1Q08919 COS111YBR203W 2775 nt2.87□□□□□ -1.95
TRE1Q08919 BAS1YKR099W 2436 nt2.87□□□□□ -1.95
TRE1Q08919 YMR326CYMR326C 309 nt2.87□□□□□ -1.95
TRE1Q08919 PTC5YOR090C 1719 nt2.87□□□□□ -1.95
TRE1Q08919 RAX2YLR084C 3663 nt2.87□□□□□ -1.95
TRE1Q08919 VPS34YLR240W 2628 nt2.86□□□□□ -1.95
TRE1Q08919 YLR149CYLR149C 2193 nt2.86□□□□□ -1.95
TRE1Q08919 PNC1YGL037C 651 nt2.86□□□□□ -1.95
TRE1Q08919 RGM1YMR182C 636 nt2.86□□□□□ -1.95
TRE1Q08919 RPL33BYOR234C 324 nt2.86□□□□□ -1.95
TRE1Q08919 YIL082W-AYIL082W-A 4497 nt2.85□□□□□ -1.95
TRE1Q08919 CLN3YAL040C 1743 nt2.85□□□□□ -1.95
TRE1Q08919 TFB5YDR079C-A 219 nt2.85□□□□□ -1.95
TRE1Q08919 RSN1YMR266W 2862 nt2.85□□□□□ -1.95
TRE1Q08919 SLH1YGR271W 5904 nt2.84□□□□□ -1.95
TRE1Q08919 IKI3YLR384C 4050 nt2.84□□□□□ -1.95
TRE1Q08919 YPL150WYPL150W 2706 nt2.84□□□□□ -1.95
TRE1Q08919 RPL20AYMR242C 519 nt2.84□□□□□ -1.95
TRE1Q08919 YOR218CYOR218C 420 nt2.84□□□□□ -1.95
TRE1Q08919 BPT1YLL015W 4680 nt2.84□□□□□ -1.95
TRE1Q08919 UBP11YKR098C 2154 nt2.84□□□□□ -1.96
TRE1Q08919 PXA2YKL188C 2562 nt2.84□□□□□ -1.96
TRE1Q08919 DYN1YKR054C 12279 nt2.83□□□□□ -1.96
TRE1Q08919 RGR1YLR071C 3249 nt2.83□□□□□ -1.96
TRE1Q08919 YOR345CYOR345C 351 nt2.83□□□□□ -1.96
TRE1Q08919 SEF1YBL066C 3447 nt2.83□□□□□ -1.96
TRE1Q08919 PFF1YBR074W 2931 nt2.83□□□□□ -1.96
TRE1Q08919 GRR1YJR090C 3456 nt2.83□□□□□ -1.96
TRE1Q08919 PSY2YNL201C 2577 nt2.82□□□□□ -1.96
TRE1Q08919 YIL174WYIL174W 228 nt2.82□□□□□ -1.96
TRE1Q08919 YJL222W-AYJL222W-A 228 nt2.82□□□□□ -1.96
TRE1Q08919 YCL001W-BYCL001W-B 255 nt2.82□□□□□ -1.96
TRE1Q08919 AXL1YPR122W 3627 nt2.81□□□□□ -1.96
TRE1Q08919 snR76snR76 109 nt2.81□□□□□ -1.96
TRE1Q08919 YIR044CYIR044C 186 nt2.81□□□□□ -1.96
TRE1Q08919 YKL165C-AYKL165C-A 234 nt2.81□□□□□ -1.96
TRE1Q08919 YLR146W-AYLR146W-A 189 nt2.81□□□□□ -1.96
TRE1Q08919 DNA2YHR164C 4569 nt2.81□□□□□ -1.96
TRE1Q08919 MCM10YIL150C 1716 nt2.81□□□□□ -1.96
TRE1Q08919 YDL247W-AYDL247W-A 75 nt2.8□□□□□ -1.96
TRE1Q08919 YHR086W-AYHR086W-A 162 nt2.8□□□□□ -1.96
TRE1Q08919 SEC7YDR170C 6030 nt2.8□□□□□ -1.96
TRE1Q08919 TOM1YDR457W 9807 nt2.79□□□□□ -1.96
TRE1Q08919 AI2Q0055 2565 nt2.79□□□□□ -1.96
TRE1Q08919 NET1YJL076W 3570 nt2.79□□□□□ -1.96
TRE1Q08919 YHR217CYHR217C 462 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)G1tW(CCA)G1 72 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)G2tW(CCA)G2 72 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)JtW(CCA)J 72 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)KtW(CCA)K 72 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)MtW(CCA)M 72 nt2.79□□□□□ -1.96
TRE1Q08919 tW(CCA)PtW(CCA)P 72 nt2.79□□□□□ -1.96
TRE1Q08919 RSE1YML049C 4086 nt2.79□□□□□ -1.96
TRE1Q08919 TFC8YPL007C 1767 nt2.79□□□□□ -1.96
TRE1Q08919 FRE2YKL220C 2136 nt2.78□□□□□ -1.96
TRE1Q08919 ESL2YKR096W 3588 nt2.78□□□□□ -1.96
TRE1Q08919 ECM29YHL030W 5607 nt2.78□□□□□ -1.96
TRE1Q08919 snR72snR72 98 nt2.78□□□□□ -1.96
TRE1Q08919 YDR182W-AYDR182W-A 204 nt2.78□□□□□ -1.96
TRE1Q08919 NOP10YHR072W-A 177 nt2.78□□□□□ -1.96
TRE1Q08919 EMC6YLL014W 327 nt2.78□□□□□ -1.96
TRE1Q08919 YLR154W-AYLR154W-A 186 nt2.78□□□□□ -1.96
TRE1Q08919 RRP12YPL012W 3687 nt2.78□□□□□ -1.96
TRE1Q08919 KSP1YHR082C 3090 nt2.78□□□□□ -1.96
TRE1Q08919 COY1YKL179C 2040 nt2.78□□□□□ -1.96
TRE1Q08919 SIN3YOL004W 4611 nt2.78□□□□□ -1.97
TRE1Q08919 RPB10YOR210W 213 nt2.77□□□□□ -1.97
TRE1Q08919 snR43snR43 209 nt2.77□□□□□ -1.97
TRE1Q08919 BCK1YJL095W 4437 nt2.77□□□□□ -1.97
TRE1Q08919 HRD3YLR207W 2502 nt2.77□□□□□ -1.97
TRE1Q08919 SPO21YOL091W 1830 nt2.77□□□□□ -1.97
TRE1Q08919 YPP1YGR198W 2454 nt2.77□□□□□ -1.97
TRE1Q08919 JSN1YJR091C 3276 nt2.76□□□□□ -1.97
TRE1Q08919 PIG1YLR273C 1947 nt2.76□□□□□ -1.97
TRE1Q08919 BRP1YGL007W 378 nt2.76□□□□□ -1.97
TRE1Q08919 SAP1YER047C 2694 nt2.76□□□□□ -1.97
TRE1Q08919 YPR089WYPR089W 2667 nt2.76□□□□□ -1.97
TRE1Q08919 DNL4YOR005C 2835 nt2.76□□□□□ -1.97
TRE1Q08919 FLO11YIR019C 4104 nt2.76□□□□□ -1.97
TRE1Q08919 SPO75YLL005C 2607 nt2.75□□□□□ -1.97
TRE1Q08919 NIP100YPL174C 2607 nt2.75□□□□□ -1.97
TRE1Q08919 RTT10YPL183C 3042 nt2.75□□□□□ -1.97
TRE1Q08919 SMY1YKL079W 1971 nt2.75□□□□□ -1.97
TRE1Q08919 YOR072W-BYOR072W-B 162 nt2.75□□□□□ -1.97
TRE1Q08919 PEP3YLR148W 2757 nt2.75□□□□□ -1.97
TRE1Q08919 YIL080WYIL080W 4722 nt2.75□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms