Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SNF5YBR289W 2718 nt3.1□□□□□ -1.91
TY1A-MR1Q04215 CHS6YJL099W 2241 nt3.1□□□□□ -1.91
TY1A-MR1Q04215 SMY1YKL079W 1971 nt3.1□□□□□ -1.91
TY1A-MR1Q04215 RRP5YMR229C 5190 nt3.09□□□□□ -1.91
TY1A-MR1Q04215 YAL067W-AYAL067W-A 228 nt3.09□□□□□ -1.91
TY1A-MR1Q04215 YNL114CYNL114C 372 nt3.09□□□□□ -1.91
TY1A-MR1Q04215 NPR3YHL023C 3441 nt3.09□□□□□ -1.91
TY1A-MR1Q04215 SEC63YOR254C 1992 nt3.09□□□□□ -1.92
TY1A-MR1Q04215 PIP2YOR363C 2991 nt3.09□□□□□ -1.92
TY1A-MR1Q04215 YEL025CYEL025C 3567 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 AUS1YOR011W 4185 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 SET3YKR029C 2256 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 BMS1YPL217C 3552 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 DYN2YDR424C 279 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 RPL20AYMR242C 519 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 POM152YMR129W 4014 nt3.08□□□□□ -1.92
TY1A-MR1Q04215 UTP14YML093W 2700 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 TCB3YML072C 4638 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 VPS3YDR495C 3036 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 YCR038W-AYCR038W-A 126 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 YHR073W-AYHR073W-A 177 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 TMA19YKL056C 504 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 RPL42AYNL162W 321 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 YPR089WYPR089W 2667 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 MIT1YEL007W 2001 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 UBP11YKR098C 2154 nt3.07□□□□□ -1.92
TY1A-MR1Q04215 KAP104YBR017C 2757 nt3.06□□□□□ -1.92
TY1A-MR1Q04215 MYO5YMR109W 3660 nt3.06□□□□□ -1.92
TY1A-MR1Q04215 SLA1YBL007C 3735 nt3.06□□□□□ -1.92
TY1A-MR1Q04215 RPS30BYOR182C 192 nt3.06□□□□□ -1.92
TY1A-MR1Q04215 RPS21AYKR057W 264 nt3.05□□□□□ -1.92
TY1A-MR1Q04215 YPR203WYPR203W 309 nt3.05□□□□□ -1.92
TY1A-MR1Q04215 UBP14YBR058C 2346 nt3.05□□□□□ -1.92
TY1A-MR1Q04215 DIA2YOR080W 2199 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 CHO2YGR157W 2610 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 SBE22YHR103W 2559 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 PRP5YBR237W 2550 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 STU2YLR045C 2667 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 RRP12YPL012W 3687 nt3.04□□□□□ -1.92
TY1A-MR1Q04215 FLO9YAL063C 3969 nt3.03□□□□□ -1.92
TY1A-MR1Q04215 GCN1YGL195W 8019 nt3.03□□□□□ -1.92
TY1A-MR1Q04215 PUT3YKL015W 2940 nt3.03□□□□□ -1.92
TY1A-MR1Q04215 COX19YLL018C-A 297 nt3.02□□□□□ -1.93
TY1A-MR1Q04215 SWI5YDR146C 2130 nt3.02□□□□□ -1.93
TY1A-MR1Q04215 RPA135YPR010C 3612 nt3.02□□□□□ -1.93
TY1A-MR1Q04215 SLD3YGL113W 2007 nt3.02□□□□□ -1.93
TY1A-MR1Q04215 PTP3YER075C 2787 nt3.01□□□□□ -1.93
TY1A-MR1Q04215 LYS14YDR034C 2373 nt3.01□□□□□ -1.93
TY1A-MR1Q04215 YKU80YMR106C 1890 nt3.01□□□□□ -1.93
TY1A-MR1Q04215 RAD4YER162C 2265 nt3□□□□□ -1.93
TY1A-MR1Q04215 YFR016CYFR016C 3702 nt3□□□□□ -1.93
TY1A-MR1Q04215 tX(XXX)DtX(XXX)D 100 nt3□□□□□ -1.93
TY1A-MR1Q04215 SNT1YCR033W 3681 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 EPL1YFL024C 2499 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 FUN30YAL019W 3396 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 tL(UAG)JtL(UAG)J 82 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 tL(UAG)L1tL(UAG)L1 82 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 tL(UAG)L2tL(UAG)L2 82 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 NOP10YHR072W-A 177 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 YAL037C-AYAL037C-A 93 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 COX12YLR038C 252 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 RGM1YMR182C 636 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 INP52YNL106C 3552 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 KSP1YHR082C 3090 nt2.99□□□□□ -1.93
TY1A-MR1Q04215 SIZ1YDR409W 2715 nt2.98□□□□□ -1.93
TY1A-MR1Q04215 YHR131W-AYHR131W-A 246 nt2.98□□□□□ -1.93
TY1A-MR1Q04215 GLC3YEL011W 2115 nt2.98□□□□□ -1.93
TY1A-MR1Q04215 MAK21YDR060W 3078 nt2.97□□□□□ -1.93
TY1A-MR1Q04215 STE11YLR362W 2154 nt2.97□□□□□ -1.93
TY1A-MR1Q04215 snR76snR76 109 nt2.97□□□□□ -1.93
TY1A-MR1Q04215 POL2YNL262W 6669 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 QCR9YGR183C 201 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 RPS28BYLR264W 204 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 RIC1YLR039C 3171 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 YAT2YER024W 2772 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 SET2YJL168C 2202 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 PDR12YPL058C 4536 nt2.96□□□□□ -1.94
TY1A-MR1Q04215 UTP8YGR128C 2142 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 RTT10YPL183C 3042 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 YNL266WYNL266W 420 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 SLM1YIL105C 2061 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 YLL054CYLL054C 2532 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 RSF2YJR127C 4143 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 SCH9YHR205W 2475 nt2.95□□□□□ -1.94
TY1A-MR1Q04215 STE23YLR389C 3084 nt2.94□□□□□ -1.94
TY1A-MR1Q04215 IRC8YJL051W 2469 nt2.94□□□□□ -1.94
TY1A-MR1Q04215 YAL064W-BYAL064W-B 381 nt2.94□□□□□ -1.94
TY1A-MR1Q04215 ROG1YGL144C 2058 nt2.94□□□□□ -1.94
TY1A-MR1Q04215 YNL018CYNL018C 1839 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 YSP2YDR326C 4317 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 RAD2YGR258C 3096 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 RAD34YDR314C 2079 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 HSH155YMR288W 2916 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 CSR2YPR030W 3366 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 MET5YJR137C 4329 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 SUL1YBR294W 2580 nt2.93□□□□□ -1.94
TY1A-MR1Q04215 HRD3YLR207W 2502 nt2.92□□□□□ -1.94
TY1A-MR1Q04215 MNL2YLR057W 2550 nt2.92□□□□□ -1.94
TY1A-MR1Q04215 PSY2YNL201C 2577 nt2.92□□□□□ -1.94
TY1A-MR1Q04215 RGA2YDR379W 3030 nt2.91□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 57.1 ms